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single cell transcriptome sequencing analysis  (10X Genomics)

 
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    Structured Review

    10X Genomics single cell transcriptome sequencing analysis
    Single Cell Transcriptome Sequencing Analysis, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/single+cell+transcriptome+sequencing+analysis/high+in+platform+plex+situ/pm39923572-122-14-12
    Average 86 stars, based on 1 article reviews
    single cell transcriptome sequencing analysis - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Amplification:

    Article Title: Intrinsic coordination of dynamic molecular signatures shape the human prefrontal cortex
    Article Snippet: .. Briefly, one-sixth of the amplified cDNA from each GEX capture was used as input per 100 μL PCR reaction for amplification of the CROP-seq scaffold, using KAPA HiFi HotStart ReadyMix for 25 cycles with the following primers: TruSeqR2-CROP_F3_1: 5′- GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCTTGGAGAACCACCTTGTTG-3′ prtlTruSeqR1_1: 5′-ACACTCTTTCCCTACACGACG-3′ For samples captured using the 10X Genomics High-throughput 3′ v3.1 kit, two technical replicate PCR reactions were run per sample to account for the larger cDNA input from the high-throughput capture. .. PCR products were purified with a 0.7X SPRI bead cleanup (Beckmann Coulter, B23318) and eluted in EB buffer.

    Polymerase Chain Reaction:

    Article Title: Intrinsic coordination of dynamic molecular signatures shape the human prefrontal cortex
    Article Snippet: .. Briefly, one-sixth of the amplified cDNA from each GEX capture was used as input per 100 μL PCR reaction for amplification of the CROP-seq scaffold, using KAPA HiFi HotStart ReadyMix for 25 cycles with the following primers: TruSeqR2-CROP_F3_1: 5′- GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCTTGGAGAACCACCTTGTTG-3′ prtlTruSeqR1_1: 5′-ACACTCTTTCCCTACACGACG-3′ For samples captured using the 10X Genomics High-throughput 3′ v3.1 kit, two technical replicate PCR reactions were run per sample to account for the larger cDNA input from the high-throughput capture. .. PCR products were purified with a 0.7X SPRI bead cleanup (Beckmann Coulter, B23318) and eluted in EB buffer.

    Single Cell:

    Article Title: ZNF683 + NK cells govern chemotherapy sensitivity in advanced HPSCC via reshaping immune microenvironment
    Article Snippet: .. The 10x Genomics Single-Cell Immune Repertoire assay (10x Genomics, Pleasanton, CA, USA) offers a powerful approach to investigate gene expression at the single-cell level. ..

    Article Title: ADGRG6 Promotes Pancreatic Adenocarcinoma Progression Through the NF-κB/STAT6 Axis and Modulation of the Tumor Immune Microenvironment
    Article Snippet: .. Both datasets utilized a high-quality scRNA-seq platform (10x Genomics), enabling a detailed examination of ADGRG6 expression at the single-cell level. ..

    Article Title: Live imaging and multimodal profiling reveal transdifferentiation of a cochlear supporting cell subpopulation upon Notch inhibition.
    Article Snippet: .. Single- cell multiomics, library prep and data analysis Twenty- four hours after compound E or DMSO treatment, cultured organs were collected and dissociated for single- cell multiomics analysis following the protocol by 10X Genomic Inc. ..


    Gene Expression:

    Article Title: ZNF683 + NK cells govern chemotherapy sensitivity in advanced HPSCC via reshaping immune microenvironment
    Article Snippet: .. The 10x Genomics Single-Cell Immune Repertoire assay (10x Genomics, Pleasanton, CA, USA) offers a powerful approach to investigate gene expression at the single-cell level. ..

    Expressing:

    Article Title: ADGRG6 Promotes Pancreatic Adenocarcinoma Progression Through the NF-κB/STAT6 Axis and Modulation of the Tumor Immune Microenvironment
    Article Snippet: .. Both datasets utilized a high-quality scRNA-seq platform (10x Genomics), enabling a detailed examination of ADGRG6 expression at the single-cell level. ..

    Cell Culture:

    Article Title: Live imaging and multimodal profiling reveal transdifferentiation of a cochlear supporting cell subpopulation upon Notch inhibition.
    Article Snippet: .. Single- cell multiomics, library prep and data analysis Twenty- four hours after compound E or DMSO treatment, cultured organs were collected and dissociated for single- cell multiomics analysis following the protocol by 10X Genomic Inc. ..

    other:

    Article Title: Multiscale domain identification for spatial transcriptomics via persistent homology
    Article Snippet: Visium invasive ductal carcinoma data are available at https://www.10xgenomics.com/datasets .



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