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immunoseq mmtcrb deep sequencing platform  (Adaptive Biotechnologies Corp)

 
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    Structured Review

    Adaptive Biotechnologies Corp immunoseq mmtcrb deep sequencing platform
    Immunoseq Mmtcrb Deep Sequencing Platform, supplied by Adaptive Biotechnologies Corp, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequencing+platform+pyrosequencing/immunoseq+platform/pmc12893904-317-24-29
    Average 86 stars, based on 1 article reviews
    immunoseq mmtcrb deep sequencing platform - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Next-Generation Sequencing:

    Article Title: T-Cell Clonal Expansion in Peripheral Blood Following Interventional Radiology Procedures for Metastatic Liver Cancer
    Article Snippet: The fresh frozen biopsy samples and whole blood samples were delivered to Adaptive Biotechnologies for genomic DNA extraction. .. High-throughput sequencing of the TCRβ CDR3 region was performed using the Adaptive ImmunoSEQ platform (Adaptive Biotechnologies, Seattle, WA, USA) at the deep level as previously reported [ , ]. ..

    Article Title: T-Cell Clonal Expansion in Peripheral Blood Following Interventional Radiology Procedures for Metastatic Liver Cancer.
    Article Snippet: The fresh frozen biopsy samples and whole blood samples were delivered to Adaptive Biotechnologies for genomic DNA extraction. .. High-throughput sequencing of the TCRβ CDR3 region was performed using the Adaptive ImmunoSEQ platform (Adaptive Biotechnologies, Seattle, WA, USA) at the deep level as previously reported [16,21]. ..

    Article Title: Lymphoid malignancy and clonality in the POT1-mediated long telomere syndrome
    Article Snippet: .. To further assess the B-cell repertoire in asymptomatic POT1 pathogenic variant carriers, we used a high-resolution next-generation sequencing assay (immunoSEQ; Adaptive Biotechnologies) to sample the variable CDR3 region of the immunoglobulin heavy chain gene ( IGH ). ..

    Amplification:

    Article Title: Detailed characterization of the immune response to Epstein-Barr virus in multiple sclerosis and following B cell depleting treatment
    Article Snippet: .. Amplification and sequencing of TCRVβ CDR3 were performed on extracted DNA from the sorted cells and from CSF cells by using the immunoSEQ Platform (Adaptive Biotechnologies®, Seattle, WA). ..

    Sequencing:

    Article Title: Detailed characterization of the immune response to Epstein-Barr virus in multiple sclerosis and following B cell depleting treatment
    Article Snippet: .. Amplification and sequencing of TCRVβ CDR3 were performed on extracted DNA from the sorted cells and from CSF cells by using the immunoSEQ Platform (Adaptive Biotechnologies®, Seattle, WA). ..

    Article Title: Ionizing radiation enhances prognostically significant cellular immunity programs in the brain metastasis microenvironment
    Article Snippet: Biomaterial concentration was measured with a Qubit 3.0 fluorometer (Thermo Fisher Scientific). .. T-cell receptor variable beta chain sequencing CDR3 regions of human TCRβ chains were sequenced using the Adaptive Immunosequencing platform (Adaptive Biotechnologies). ..

    Clinical Proteomics:

    Article Title: Detailed characterization of the immune response to Epstein-Barr virus in multiple sclerosis and following B cell depleting treatment
    Article Snippet: .. Amplification and sequencing of TCRVβ CDR3 were performed on extracted DNA from the sorted cells and from CSF cells by using the immunoSEQ Platform (Adaptive Biotechnologies®, Seattle, WA). ..

    Variant Assay:

    Article Title: Lymphoid malignancy and clonality in the POT1-mediated long telomere syndrome
    Article Snippet: .. To further assess the B-cell repertoire in asymptomatic POT1 pathogenic variant carriers, we used a high-resolution next-generation sequencing assay (immunoSEQ; Adaptive Biotechnologies) to sample the variable CDR3 region of the immunoglobulin heavy chain gene ( IGH ). ..

    Single Cell:

    Article Title: Phase II Study of Pegvorhyaluronidase Alfa (PEGPH20) and Pembrolizumab for Patients with Hyaluronan-High, Pretreated Metastatic Pancreatic Ductal Adenocarcinoma: PCRT16-001.
    Article Snippet: Tumor DNA was isolated by mincing followed by extraction utilizing a DNeasy kit (Qiagen). .. T cell clonality was evaluated from single cell suspensions of flash frozen tumor samples using the ImmunoSEQ® platform (Adaptive Biotechnologies). ..



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    Mapping of the search strategy, methodology, and results. To assess the role of the CVM in HPV‐associated cervical carcinogenesis, 2223 records were identified in Embase, Medline and Web of Science, of which 951 duplicates were excluded. 1272 articles were screened by title and abstract for relevance and the full texts of 276 articles were assessed for eligibility. Two additional articles were identified in PubMed following the systematic search. A total of 21 observational studies, 4 systematic reviews, and 3 meta‐analyses were included. To assess the diagnostic performance of the CVM in HPV‐associated cervical carcinogenesis, 7 relevant articles were identified in PubMed, of which 3 were excluded. Of the 4 full texts assessed for eligibility, one was excluded as it only assessed the diagnostic performance of bacterial genes (not taxa). The corresponding search strategies for the aforementioned searches are detailed in Table . To identify common metagenomic techniques in microbial research, 11 resources were identified through a focused search of Google and Google Scholar to identify webpages and scholarly articles, respectively. Abbreviations: CVM, cervicovaginal microbiome; HPV, human papillomavirus; ROC, receiver operating characteristic; WMS, whole metagenome <t>sequencing;</t> 16S rRNA, 16S ribosomal RNA.
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    Image Search Results


    Mapping of the search strategy, methodology, and results. To assess the role of the CVM in HPV‐associated cervical carcinogenesis, 2223 records were identified in Embase, Medline and Web of Science, of which 951 duplicates were excluded. 1272 articles were screened by title and abstract for relevance and the full texts of 276 articles were assessed for eligibility. Two additional articles were identified in PubMed following the systematic search. A total of 21 observational studies, 4 systematic reviews, and 3 meta‐analyses were included. To assess the diagnostic performance of the CVM in HPV‐associated cervical carcinogenesis, 7 relevant articles were identified in PubMed, of which 3 were excluded. Of the 4 full texts assessed for eligibility, one was excluded as it only assessed the diagnostic performance of bacterial genes (not taxa). The corresponding search strategies for the aforementioned searches are detailed in Table . To identify common metagenomic techniques in microbial research, 11 resources were identified through a focused search of Google and Google Scholar to identify webpages and scholarly articles, respectively. Abbreviations: CVM, cervicovaginal microbiome; HPV, human papillomavirus; ROC, receiver operating characteristic; WMS, whole metagenome sequencing; 16S rRNA, 16S ribosomal RNA.

    Journal: Journal of Medical Virology

    Article Title: A Narrative Review of the Putative Etiologic Role and Diagnostic Utility of the Cervicovaginal Microbiome in Human Papillomavirus‐Associated Cervical Carcinogenesis

    doi: 10.1002/jmv.70027

    Figure Lengend Snippet: Mapping of the search strategy, methodology, and results. To assess the role of the CVM in HPV‐associated cervical carcinogenesis, 2223 records were identified in Embase, Medline and Web of Science, of which 951 duplicates were excluded. 1272 articles were screened by title and abstract for relevance and the full texts of 276 articles were assessed for eligibility. Two additional articles were identified in PubMed following the systematic search. A total of 21 observational studies, 4 systematic reviews, and 3 meta‐analyses were included. To assess the diagnostic performance of the CVM in HPV‐associated cervical carcinogenesis, 7 relevant articles were identified in PubMed, of which 3 were excluded. Of the 4 full texts assessed for eligibility, one was excluded as it only assessed the diagnostic performance of bacterial genes (not taxa). The corresponding search strategies for the aforementioned searches are detailed in Table . To identify common metagenomic techniques in microbial research, 11 resources were identified through a focused search of Google and Google Scholar to identify webpages and scholarly articles, respectively. Abbreviations: CVM, cervicovaginal microbiome; HPV, human papillomavirus; ROC, receiver operating characteristic; WMS, whole metagenome sequencing; 16S rRNA, 16S ribosomal RNA.

    Article Snippet: , Amplicon sequencing using a sequencing platform (i.e., Pyrosequencing, Illumina MiSeq, Illumina nextSeq, PacBlo Seqel II/IIe, Nanopore) , Sequencing all genomic DNA using a sequencing platform (i.e., Illumina novaSeq, HiSeq ).

    Techniques: Diagnostic Assay, Sequencing

    16S rRNA gene sequencing and WMS for CVM characterization.

    Journal: Journal of Medical Virology

    Article Title: A Narrative Review of the Putative Etiologic Role and Diagnostic Utility of the Cervicovaginal Microbiome in Human Papillomavirus‐Associated Cervical Carcinogenesis

    doi: 10.1002/jmv.70027

    Figure Lengend Snippet: 16S rRNA gene sequencing and WMS for CVM characterization.

    Article Snippet: , Amplicon sequencing using a sequencing platform (i.e., Pyrosequencing, Illumina MiSeq, Illumina nextSeq, PacBlo Seqel II/IIe, Nanopore) , Sequencing all genomic DNA using a sequencing platform (i.e., Illumina novaSeq, HiSeq ).

    Techniques: Sequencing, Extraction, Amplification, Nanopore Sequencing, Marker, Bacteria