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dna sequencing and variant analysis by codoncode aligner program  (CodonCode corporation)

 
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    CodonCode corporation dna sequencing and variant analysis by codoncode aligner program
    Dna Sequencing And Variant Analysis By Codoncode Aligner Program, supplied by CodonCode corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequencing+analysis+program+agent/dna+sequencing+and+variant+analysis+by+codoncode+aligner+program/pm31691311-6120-31-31
    Average 90 stars, based on 1 article reviews
    dna sequencing and variant analysis by codoncode aligner program - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Variant Assay:

    Article Title: The 30th Regional Congress of the ISBT, Bangkok, Thailand, 16-19 Nov, 2019.
    Article Snippet: .. Methods: We analyzed the variant of CD36 gene on exon 2–14 from one CD36 deficiency type I and nine CD36 deficiency type II samples by DNA sequencing and variant analysis by CodonCode Aligner program. ..

    DNA Sequencing:

    Article Title: The 30th Regional Congress of the ISBT, Bangkok, Thailand, 16-19 Nov, 2019.
    Article Snippet: .. Methods: We analyzed the variant of CD36 gene on exon 2–14 from one CD36 deficiency type I and nine CD36 deficiency type II samples by DNA sequencing and variant analysis by CodonCode Aligner program. ..



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    Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary <t>sequencing</t> and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.
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    Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary sequencing and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.

    Journal: The Pharmacogenomics Journal

    Article Title: A TOMM40 variable-length polymorphism predicts the age of late-onset Alzheimer's disease

    doi: 10.1038/tpj.2009.69

    Figure Lengend Snippet: Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary sequencing and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.

    Article Snippet: A proprietary sequencing analysis program called ‘Agent' (developed by Celera, Alameda, CA, USA) was used to align sequencing reads to the appropriate reference sequence, and produce ‘contigs' associated with each clone.

    Techniques: Sequencing, Labeling