Review

fast5 files (a native data format provided by nanopore sequencers) (Oxford Nanopore)

About

News

Press Release

Team

Advisors

Partners

Contact

Bioz Stars

Bioz vStars

Buy from Supplier

Structured Review

Oxford Nanopore fast5 files (a native data format provided by nanopore sequencers)
Fast5 Files (A Native Data Format Provided By Nanopore Sequencers), supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencer+data+file+format/graphical+viewer+for+oxford+nanopore+bulk+fast5+files/pmc11271077-48-16-0
Average 90 stars, based on 1 article reviews

fast5 files (a native data format provided by nanopore sequencers) - by Bioz Stars, 2026-10

90/100 stars

Images

other:

Article Title: Multidimensional third-generation sequencing of modified DNA bases allows interrogation of complex biological systems.
Article Snippet: Raw signal values of full-length reads were isolated from the total fast5 files using ont_fast5_api (Oxford Nanopore Technologies).

Article Title: Multidimensional third-generation sequencing of modified DNA bases allows interrogation of complex biological systems.
Article Snippet: The raw sequencing reads (Oxford Nanopore fast5 files) generated in this study have been deposited into Sequencing Read Archive (SRA) under accession code PRJNA1083468.

Article Title: Multidimensional third-generation sequencing of modified DNA bases allows interrogation of complex biological systems
Article Snippet: The raw sequencing reads (Oxford Nanopore fast5 files) generated in this study have been deposited into Sequencing Read Archive (SRA) under accession code PRJNA1083468 .

Article Title: Development of a semicomprehensive detection method for paramyxoviruses and its validation using Indonesian bats.
Article Snippet: In parallel, for the Nanopore sequencing data, the generated raw Nanopore data (Fast5) were basecalled using Guppy version 6.4.6 + ae70e8f (Oxford Nanopore Technologies).

Sequencing:

Article Title: Environmental diversity of Candidatus Babelota and their relationships with protists
Article Snippet: .. For Oxford Nanopore sequence, the raw fast5 files were basecalled, demultiplexed, and quality controlled (based on Q9 cutoff) with Guppy v 6.4.6. ..

Produced:

Article Title: True random number generation based on instrument data
Article Snippet: .. A channel in an Oxford Nanopore multiple-read produced fast5 file is related to a specific pore, which is monitored throughout its lifetime by the event timing detector 312 to generate the meaningful data (reads) and the intermediate periods of inactivity (gaps). ..