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sequence databases  (Broad Institute Inc)

 
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    Broad Institute Inc sequence databases
    Sequence Databases, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequence+identity+calculation+algorithm+ncbi+blast/sequence+databases/pmc09485057-498-19-29
    Average 90 stars, based on 1 article reviews
    sequence databases - by Bioz Stars, 2026-09
    90/100 stars

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    Sequencing:

    Article Title: Two fission yeast rab7 homologs, ypt7 and ypt71, play antagonistic roles in the regulation of vacuolar morphology.
    Article Snippet: .. We also found this second Rab7 ortholog in sequence databases of other fission yeasts including Schizosaccharomyces octosporus (S. octosporus) and Schizosaccharomyces japonicus (S. japonicus) (Broad Institute) (Figure S1). ..

    Article Title: Myb transcription factors in the oomycete Phytophthora with novel diversified DNA-binding domains and developmental stage-specific expression.
    Article Snippet: Abbreviations: R2R3, protein with Myb domains R2 Myb domains R1, R2 and R3; DNA, deoxyribonucleic minutes; rpm, revolutions per secton; mM, millimolar; reverse transcription polymerase chain reaction; cDNA maltose binding protein; ng, nanogram; A, adenine; thymidine; μg, microgram; dI:dC, polymer of deoxyino ethylenediaminetetraacetic acid; DTT, dithiothreitol; nucleotide; Y, C or T; Asn, asparagine; Glu, glutamic aci Thr, threonine; Phe, phenylalanine; Trp, tryptophan; E shift assay; Lys, lysine.. ⁎ Corresponding author.. Tel.

    Article Title: Oxygen-dependent regulation of E3(SCF)ubiquitin ligases and a Skp1-associated JmjD6 homolog in development of the social amoeba Dictyostelium
    Article Snippet: .. In brief, the sequence of the JmjC domain (147 amino acid residues) from XP_646466.1 was used as query for BLASTp searches against sequence databases (NCBI, DOE JGI, EUPATHDB, and Broad Institute). ..

    Article Title: Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants
    Article Snippet: .. BLAST analysis was performed using sequence databases accessible from the National Center for Biotechnology Information (NCBI) server [ ], The U.S. Department of Energy Joint Genome Institute [ ], and Broad Institute of MIT and Harvard [ ] as well as Phytozome, a tool for green plant comparative genomics [ ]. ..



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