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clustalw multiple sequence alignment algorithm  (Imgen Inc)

 
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    Structured Review

    Imgen Inc clustalw multiple sequence alignment algorithm
    Clustalw Multiple Sequence Alignment Algorithm, supplied by Imgen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequence+alignment+tool/clustalw+multiple+sequence+alignment+tool/pm11161796-56-6-11
    Average 90 stars, based on 1 article reviews
    clustalw multiple sequence alignment algorithm - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Identification and characterization of an inner ear-expressed human melanoma inhibitory activity (MIA)-like gene (MIAL) with a frequent polymorphism that abolishes translation.
    Article Snippet: .. Sequence alignments were performed using the ClustalW multiple sequence alignment algorithm (http://dot.imgen.bcm.tmc.edu:9331/multi-align/multi-align. html). ..

    Article Title: Genetic diversity analysis of switchgrass (Panicum virgatum L.) populations using microsatellites and chloroplast sequences
    Article Snippet: The agricultural landscape of the United States could soon be changed by planting of switchgrass (Panicum virgatum L.) cultivars to meet governmentmandated targets for lignocellulosic bioenergy production and consumption.. This alteration could affect the genetic structure of wild switchgrass populations, which are native to the eastern half of North America through cultivar introgression.. In this study, PCR amplification of microsatellite fragments as well as chloroplast gene-specific markers were utilized to quantify the genetic diversity and structure of five native populations and three agronomic fields (hereafter ‘populations’) planted with switchgrass cultivars.

    Article Title: A novel dual-specificity protein kinase targeted to the chloroplast in tobacco.
    Article Snippet: The NtDSK1 cDNA encoding a novel chloroplasttargeted protein kinase was identified in Nicotiana tabacum.. It contains the kinase domain at the C-terminus and a putative regulatory domain at the N-terminus.. The recombinant NtDSK1 underwent autophosphorylation of serine, threonine, and tyrosine residues, indicating that NtDSK1 encodes a functional dualspecificity protein kinase.

    Article Title: Genome Analysis and Strain Comparison of Correia Repeats and Correia Repeat-Enclosed Elements in Pathogenic Neisseria
    Article Snippet: .. Consensus sequences for 105-bp sequence elements and other CREE were obtained by using the CLUSTALW multiple sequence alignment tool ( http://dot.imgen.bcm.tmc.edu:9331/multi-align/multi-align.html ) and the BoxShade program ( http://www.ch.embnet.org/software/BOX_form.html ). ..

    Article Title: Rat strain differences in peripheral and central serotonin transporter protein expression and function.
    Article Snippet: Female Fischer 344 (F344) rats have been shown to display increased serotonin transporter (5-HTT) gene expression in the dorsal raphe, compared to female Lewis (LEW) rats.. Herein, we explored, by means of synaptosomal preparations and in vivo microdialysis, whether central, but also peripheral, 5-HTT protein expression/function differ between strains.. Midbrain and hippocampal [H]paroxetine binding at the 5-HTT and hippocampal [H]serotonin (5-HT) reuptake were increased in male and female F344 rats, compared to their LEW counterparts, these strain differences being observed both in rats of commercial origin and in homebred rats.

    Article Title: Genome Analysis and Strain Comparison of Correia Repeats and Correia Repeat-Enclosed Elements in Pathogenic Neisseria
    Article Snippet: .. Consensus sequences for 105-bp sequence elements and other CREE were obtained by using the CLUSTALW multiple sequence alignment tool (http://dot.imgen.bcm .tmc.edu:9331/multi-align/multi-align.html) and the BoxShade program (http: //www.ch.embnet.org/software/BOX form.html). ..

    Article Title: Cloning and immunologic characterization of a truncated Bordetella bronchiseptica filamentous hemagglutinin fusion protein.
    Article Snippet: Filamentous hemagglutinin (FHA) is an outer-membrane associated adhesin conserved within the genus Bordetella.. FHA provides protection against B. pertussis infections in humans and is a component of acellular whooping cough vaccines.. Furthermore, FHA serves as a protective antigen in several animal models of infection with B. bronchiseptica and may serve as a protective antigen of canine bordetellosis.

    Comparison:

    Article Title: Genetic diversity analysis of switchgrass (Panicum virgatum L.) populations using microsatellites and chloroplast sequences
    Article Snippet: The agricultural landscape of the United States could soon be changed by planting of switchgrass (Panicum virgatum L.) cultivars to meet governmentmandated targets for lignocellulosic bioenergy production and consumption.. This alteration could affect the genetic structure of wild switchgrass populations, which are native to the eastern half of North America through cultivar introgression.. In this study, PCR amplification of microsatellite fragments as well as chloroplast gene-specific markers were utilized to quantify the genetic diversity and structure of five native populations and three agronomic fields (hereafter ‘populations’) planted with switchgrass cultivars.

    Article Title: Regulation of Bcl-2 expression by dihydrotestosterone in hormone sensitive LNCaP-FGC prostate cancer cells.
    Article Snippet: Purpose: Up-regulation of the anti-apoptotic bcl-2 proto-oncogene is associated with androgen independent prostate cancer progression.. This observation suggests that the expression of bcl-2 may be negatively regulated by androgens in prostate cancer cells.. Materials and Methods: The expression of the proto-oncogene bcl-2 was assessed in the hormone sensitive prostate cancer cell line LNCaP-FGC in the presence and absence of a physiological concentration of 1 nM. dihydrotestosterone (DHT).

    Article Title: A novel dual-specificity protein kinase targeted to the chloroplast in tobacco.
    Article Snippet: The NtDSK1 cDNA encoding a novel chloroplasttargeted protein kinase was identified in Nicotiana tabacum.. It contains the kinase domain at the C-terminus and a putative regulatory domain at the N-terminus.. The recombinant NtDSK1 underwent autophosphorylation of serine, threonine, and tyrosine residues, indicating that NtDSK1 encodes a functional dualspecificity protein kinase.

    Software:

    Article Title: Cloning and immunologic characterization of a truncated Bordetella bronchiseptica filamentous hemagglutinin fusion protein.
    Article Snippet: Filamentous hemagglutinin (FHA) is an outer-membrane associated adhesin conserved within the genus Bordetella.. FHA provides protection against B. pertussis infections in humans and is a component of acellular whooping cough vaccines.. Furthermore, FHA serves as a protective antigen in several animal models of infection with B. bronchiseptica and may serve as a protective antigen of canine bordetellosis.



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