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Structured Review

Ridom GmbH seqsphere1 software version 7
Seqsphere1 Software Version 7, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/seqsphere1/seqsphere1/pm37338382-142-30-34
Average 90 stars, based on 1 article reviews
seqsphere1 software version 7 - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

other:

Article Title: Widespread Detection of Yersiniabactin Gene Cluster and Its Encoding Integrative Conjugative Elements (ICE Kp ) among Nonoutbreak OXA-48-Producing Klebsiella pneumoniae Clinical Isolates from Spain and the Netherlands.
Article Snippet: Each circle represents an allelic profile based on a cgMLST scheme of 2,365 target genes (SeqSphere1 Ridom, GmbH, Münster, Germany). (A) Complex types based on a threshold of #15 allele differences.

Article Title: Core genome multilocus sequence typing analysis of Finnish Taylorella equigenitalis isolates.
Article Snippet: The genome sequences were subjected to local ad hoc cgMLST analysis using Ridom SeqSphere+ 1) All isolates originate from different sampling time points.


Software:

Article Title: New Multilocus Sequence Typing Scheme for Enterococcus faecium Based on Whole Genome Sequencing Data.
Article Snippet: .. Genomes were analyzed via SeqSphere1 software (Ridom) using cgMLST.org Nomenclature server database, and WGS clusters and cgMLST profiles were determined. ..

Article Title: New Multilocus Sequence Typing Scheme for Enterococcus faecium Based on Whole Genome Sequencing Data.
Article Snippet: .. In silico MLST, cgMLST, and wgMLST analyses were performed for all clinical isolates and database genomes using Ridom SeqSphere1 version 8 software (Ridom, DE) (36). ..

Article Title: Pharyngeal Communities and Antimicrobial Resistance in Pangolins in Gabon.
Article Snippet: .. Based on the allelic profiles of the cgMLST scheme, we constructed a neighbor-joining tree to display the clonal relationship among the ESBL-E and, if applicable, additional reference strains using Ridom SeqSphere1 software version 7 (Ridom GmbH, Münster, Germany) (23). ..

Comparison:

Article Title: Widespread Detection of Yersiniabactin Gene Cluster and Its Encoding Integrative Conjugative Elements (ICE Kp ) among Nonoutbreak OXA-48-Producing Klebsiella pneumoniae Clinical Isolates from Spain and the Netherlands.
Article Snippet: .. A Klebsiella pneumoniae/K. variicola/K. quasipneumoniae cgMLST scheme consisting of 2,365 targets from SeqSphere1 (Ridom GmbH, Münster, Germany) was used for a gene-by-gene comparison of assembled genomes. ..

In Silico:

Article Title: New Multilocus Sequence Typing Scheme for Enterococcus faecium Based on Whole Genome Sequencing Data.
Article Snippet: .. In silico MLST, cgMLST, and wgMLST analyses were performed for all clinical isolates and database genomes using Ridom SeqSphere1 version 8 software (Ridom, DE) (36). ..

Construct:

Article Title: Pharyngeal Communities and Antimicrobial Resistance in Pangolins in Gabon.
Article Snippet: .. Based on the allelic profiles of the cgMLST scheme, we constructed a neighbor-joining tree to display the clonal relationship among the ESBL-E and, if applicable, additional reference strains using Ridom SeqSphere1 software version 7 (Ridom GmbH, Münster, Germany) (23). ..



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