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seqman contig assembly module  (DNASTAR)


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    Structured Review

    DNASTAR seqman contig assembly module
    Seqman Contig Assembly Module, supplied by DNASTAR, used in various techniques. Bioz Stars score: 97/100, based on 2804 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/seqman+pro+module/SeqMan+Pro/pmc12039119-56-3-7
    Average 97 stars, based on 2804 article reviews
    seqman contig assembly module - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    Generated:

    Article Title: Morphological and phylogenetic characterization of three new Cortinarius (Cortinariaceae, Agaricales) species in Yunnan, China
    Article Snippet: .. The newly generated sequences were checked for ambiguous bases and assembled using DNASTAR Lasergene SeqMan Pro v.7.1.0. ..

    Article Title: Development of a multilocus sequence typing tool for Balantioides coli and its genetic diversity in pigs.
    Article Snippet: .. Consensus sequences were generated by assembling available sequencing results using the SeqMan program in Lasergene 7.1.0 (https://www.dnastar.com/software/lasergene/) (30). ..

    Sequencing:

    Article Title: Development of a multilocus sequence typing tool for Balantioides coli and its genetic diversity in pigs.
    Article Snippet: .. Consensus sequences were generated by assembling available sequencing results using the SeqMan program in Lasergene 7.1.0 (https://www.dnastar.com/software/lasergene/) (30). ..

    Article Title: Bloodmeal analysis via COI-targeted DNA capture and enrichment identifies non-cattle hosts of Amblyomma variegatum on St. Croix, US Virgin Islands.
    Article Snippet: .. Sequence chromatograms were edited manually in SeqMan Pro v17 (DNASTAR, Madison, WI), and primers were trimmed resulting in a 590 bp fragment. ..

    Article Title: Two canine urogenital isolates related to Trueperella bernardiae represent a distinct lineage.
    Article Snippet: Following amplification of four target genes and ISR, the resulting qPCR products were purified and sequenced using the Sanger sequencing services provided by Eurofins Genomics GmbH (Ebersberg, Germany). .. Sequence chromatograms were processed and assembled into consensus sequences using SeqMan Pro® software v15 (DNASTAR, Inc., Madison, WI, USA). .. The final sequences were submitted to GenBank, hosted by the National Center for Biotechnology Information (NCBI, Bathesda, MD, USA).

    Article Title: Divergent tissue tropism and pathogenicity of novel recombinant GI-19 and GI-22 infectious bronchitis virus strains
    Article Snippet: The 5′ and 3′ terminal regions of each isolate were obtained using the SMARTer RACE 5′/3′ kit (634858, TaKaRa, China). .. Sequencing reads were assembled using the SeqMan program within the Lasergene 7.1 software package (DNASTAR Inc., Madison, WI, USA) to generate the full-length IBV genome sequences. .. Sequence similarity analyses were performed using nucleotide BLAST in the National Center for Biotechnology Information (NCBI) database.

    Software:

    Article Title: Two canine urogenital isolates related to Trueperella bernardiae represent a distinct lineage.
    Article Snippet: Following amplification of four target genes and ISR, the resulting qPCR products were purified and sequenced using the Sanger sequencing services provided by Eurofins Genomics GmbH (Ebersberg, Germany). .. Sequence chromatograms were processed and assembled into consensus sequences using SeqMan Pro® software v15 (DNASTAR, Inc., Madison, WI, USA). .. The final sequences were submitted to GenBank, hosted by the National Center for Biotechnology Information (NCBI, Bathesda, MD, USA).

    Article Title: Divergent tissue tropism and pathogenicity of novel recombinant GI-19 and GI-22 infectious bronchitis virus strains
    Article Snippet: The 5′ and 3′ terminal regions of each isolate were obtained using the SMARTer RACE 5′/3′ kit (634858, TaKaRa, China). .. Sequencing reads were assembled using the SeqMan program within the Lasergene 7.1 software package (DNASTAR Inc., Madison, WI, USA) to generate the full-length IBV genome sequences. .. Sequence similarity analyses were performed using nucleotide BLAST in the National Center for Biotechnology Information (NCBI) database.

    Article Title: Genomic analysis and pathogenic characterization of novel PRRSV-1 strain HBEU-328 in North China.
    Article Snippet: Porcine reproductive and respiratory syndrome virus 1 (PRRSV-1) is an emerging threat to the Chinese swine industry, with limited pathogenic data available on the BJEU06-1-like subgroup in North China.. In this study, we isolated PRRSV-1 strain HBEU-328 from an unvaccinated pig farm in Hebei Province, 2022.. Whole-genome sequencing showed that its genome is 15,068 nucleotides long and that it belongs to the BJEU06-1-like subgroup, clustering with Henan isolates, indicating its crossregional transmission.

    Article Title: Genetic Diversity and Novel Lineages of Anaplasma , Ehrlichia , and Coxiella -like Endosymbionts in Ticks from a Forest Ecosystem in Northeastern China.
    Article Snippet: .. Genetic and Phylogenetic Analysis Sequencing results were assembled and proofread using the SeqMan program in the Lasergene software package (DNASTAR Lasergene 17) to obtain high-quality consensus sequences. .. Homologous sequences were identified using the BLASTn algorithm implemented at the National Center for Biotechnology Information (NCBI) (https://blast.ncbi.nlm.nih.gov/Blast.cgi; accessed on 15 August 2025) [43].

    Genomic Sequencing:

    Article Title: Genomic analysis and pathogenic characterization of novel PRRSV-1 strain HBEU-328 in North China.
    Article Snippet: Porcine reproductive and respiratory syndrome virus 1 (PRRSV-1) is an emerging threat to the Chinese swine industry, with limited pathogenic data available on the BJEU06-1-like subgroup in North China.. In this study, we isolated PRRSV-1 strain HBEU-328 from an unvaccinated pig farm in Hebei Province, 2022.. Whole-genome sequencing showed that its genome is 15,068 nucleotides long and that it belongs to the BJEU06-1-like subgroup, clustering with Henan isolates, indicating its crossregional transmission.



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