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second-generation sequencing data  (Illumina Inc)


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    Illumina Inc second-generation sequencing data
    Second Generation Sequencing Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/second-generation+sequencing+data/second+generation+sequencing+data/pm39855357-184-16-17
    Average 90 stars, based on 1 article reviews
    second-generation sequencing data - by Bioz Stars, 2026-10
    90/100 stars

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    Article Title: Closing the genome of unculturable cable bacteria using a combined metagenomic assembly of long and short sequencing reads
    Article Snippet: To improve on this, we explored a hybrid genome assembly approach, where we combined short-read, accurate, second-generation sequencing data from Illumina with long-read, less-accurate, third-generation sequencing data from ONT.

    Article Title: An MDR Salmonella Enteritidis sublineage associated with gastroenteritis outbreaks and invasive disease in China.
    Article Snippet: In this study, we obtained eleven complete plasmids from the assemblies generated by the combination of secondgeneration (Illumina short reads) and third-generation (Nanopore long reads) sequencing data.

    Article Title: Full-length transcriptome analysis of Ophioglossum vulgatum: effects of experimentally identified chloroplast gene clusters on expression and evolutionary patterns.
    Article Snippet: Genes with similar or related functions in chloroplasts are often arranged in close proximity, forming clusters on chromosomes.. These clusters are transcribed coordinated to facilitate the expression of genes with specific function.. Our previous study revealed a significant negative correlation between the chloroplast gene expression level of the rare medicinal fern Ophioglossum vulgatum and its evolutionary rates as well as selection pressure.

    Article Title: Analysis of the Complete Mitochondrial Genome of the Bitter Gourd ( Momordica charantia ).
    Article Snippet: We used Illumina second-generation sequencing data and PacBio third-generation sequencing data to assemble the bitter gourd mitochondrial genome using a hybrid assembly strategy.

    Article Title: Whole Genome Sequencing and Comparative Genomic Analysis of Chlamydia gallinacea Field Strains Isolated from Poultry in Poland.
    Article Snippet: The remaining three genome sequences (20-303/10, 19-502/7, and 15-56/1) were obtained based just on second-generation sequencing data (Illumina).

    Article Title: Merging High-Throughput, Amplicon-Based Second and Third Generation Sequencing Data: An Integrative and Modular Data Analysis Framework for Haplotype Prediction and Output Evaluation.
    Article Snippet: We constructed an integrative, open-access modular data-analysis framework that allows for automated processing of high-throughput sequencing data from both second (Illumina) and third generation (ONT) sequencing platforms, combining the strengths of both technologies.

    Sequencing:

    Article Title: Orf116b Induces Pollen Abortion in a Novel Cotton ( Gossypium hirsutum L.) Cytoplasmic Male Sterile Line J4A
    Article Snippet: Then, the Illumina reads were assembled using GetOrganelle v1.7.1 ( https://github.com/Kinggerm/GetOrganelle , accessed on 27 December 2022) and compared with the PacBio data using BWA v0.7.17 ( https://github.com/lh3/bwa , accessed on 29 December 2022). .. The third-generation sequencing data were extracted, mixed with the Illumina data, and assembled using SPAdes v3.14.1. ..



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