single-cell rna sequencing profiles (KU Leuven)
Structured Review

Single Cell Rna Sequencing Profiles, supplied by KU Leuven, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/scrna+seq+data/scrna+seq+data/pmc08507736-41-2-35
Average 90 stars, based on 1 article reviews
Images
1) Product Images from "Implications of Intratumor Heterogeneity on Consensus Molecular Subtype (CMS) in Colorectal Cancer"
Article Title: Implications of Intratumor Heterogeneity on Consensus Molecular Subtype (CMS) in Colorectal Cancer
Journal: Cancers
doi: 10.3390/cancers13194923
Figure Legend Snippet: scCMS of individual cells. ( a ) Heatmap plot of normalized enrichment scores of the 27 marker gene-sets across all single tumor cells of 10 CRC samples from Lee et al. cohort. ( b ) UMAP plot of different tumor-tissue cell lineages. ( c ) UMAP plot of the four scCMS distributions and mixed transcriptomic states of the single tumor cells. ( d ) Proportions of scCMS groups in different cell lineages from Lee et al. scRNASeq dataset. ( e ) The UMAP plot of the epithelial-cell subtypes. ( f ) scCMS distributions within the epithelial-cell cluster. ( g ) Proportions of scCMSs in the populations of enterocytes and goblet- and transit-amplifying (TA) cells.
Techniques Used: Marker
Figure Legend Snippet: scCMSs from two CRC with mixed subtype from bulk transcriptome. UMAP plots of different single-cell types and scCMS predictions in ( a , b ) Patient #1 and ( c , d ) Patient #2 scRNAseq profiles, respectively. UMAP plots of single tumor cells were plotted using the normalized enrichment scores of the 27 marker gene sets obtained from ssGSEA. ( e ) Distributions of scCMSs in immune-, epithelial-, and stromal cell populations in patient #1 and patient #2.
Techniques Used: Marker
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