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crude nuclear extract  (Santa Cruz Biotechnology)


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    Structured Review

    Santa Cruz Biotechnology crude nuclear extract
    Crude Nuclear Extract, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 93/100, based on 47 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/salt+buffer/ChIP+Lysis+Buffer+High+Salt/ppr0246731-118-18-29
    Average 93 stars, based on 47 article reviews
    crude nuclear extract - by Bioz Stars, 2026-10
    93/100 stars

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    Related Articles

    Incubation:

    Article Title: Restoration of myogenesis in ALS-myocytes through miR-26a-5p-mediated Smad4 inhibition and its impact on motor neuron development.
    Article Snippet: Briefly, chromatin was precleared by adding 50 μl Protein A/G 779 PLUS-Agarose (Santa Crus, sc-2003) and incubated for 30 minutes at 4° C. After the solution was 780 centrifugated at full speed for 5 minutes at 4° C and the supernatant transferred to a new tube where 781 the primary antibody was added. .. After an overnight incubation at 4° C 50 μl of Protein A/G PLUS-782 Agarose were added and incubated for 2 h at 4° C. Beads were harvested by centrifugations at 12,000 783 rpm for 20 sec. Beads were washed twice with 1 ml of Lysis Buffer High Salt (Santa Cruz; sc-45001) 784 and other two times with Wash Buffer (Santa Cruz; sc-45002). .. Beads were resuspended in the Elution 785 Buffer (Santa Cruz; sc-45003).

    Article Title: Aβ-induced mitochondrial dysfunction in neural progenitors controls KDM5A to influence neuronal differentiation
    Article Snippet: .. Cell pellets were suspended with lysis buffer (sc-45000, Santa Cruz) and centrifuged at 3,000 rpm for 5 min. Crude nuclear extract was re-suspended with high salt lysis buffer (sc-45001, Santa Cruz) and sonicated 15 times by 30 s burst, each followed by 1 min incubation on ice. ..

    Lysis:

    Article Title: Restoration of myogenesis in ALS-myocytes through miR-26a-5p-mediated Smad4 inhibition and its impact on motor neuron development.
    Article Snippet: Briefly, chromatin was precleared by adding 50 μl Protein A/G 779 PLUS-Agarose (Santa Crus, sc-2003) and incubated for 30 minutes at 4° C. After the solution was 780 centrifugated at full speed for 5 minutes at 4° C and the supernatant transferred to a new tube where 781 the primary antibody was added. .. After an overnight incubation at 4° C 50 μl of Protein A/G PLUS-782 Agarose were added and incubated for 2 h at 4° C. Beads were harvested by centrifugations at 12,000 783 rpm for 20 sec. Beads were washed twice with 1 ml of Lysis Buffer High Salt (Santa Cruz; sc-45001) 784 and other two times with Wash Buffer (Santa Cruz; sc-45002). .. Beads were resuspended in the Elution 785 Buffer (Santa Cruz; sc-45003).

    Article Title: E protein binding at the Tcra enhancer promotes Tcra repertoire diversity
    Article Snippet: Cross-linked cells were resuspended at 20 x 10 6 cells/mL in ChIP Lysis Buffer (Santa Cruz Biotechnology, Cat. sc-45000) and incubated 5 min on ice. .. Cross-linked cells were pelleted and resuspended at 10 x 10 6 cells/mL in ChIP Lysis Buffer High Salt (Santa Cruz Biotechnology, Cat. sc-45001). .. Samples were sonicated for four cycles (30 s on, 30 s off) using a Bioruptor Pico (Diagenode).

    Article Title: Valemetostat–SAHA-Driven Acetylation of p53 via SET/TAF-Iβ Displacement and p300 Activation Modulates Cell Cycle Regulators in Pancreatic Cancer Cells
    Article Snippet: .. The nuclei were resuspended in 1.9 mL Lysis Buffer High Salt (Santa Cruz Biotechnology Inc., Dallas, TX, USA, cat n.sc-45001) and sonicated on ice in continuous mode for 1 min 4 times every 30 s to generate DNA fragments of size ranging from 2000 to 100 bp, with the majority of them ranging between 300 and 500 bp. ..

    Article Title: PRMT5 is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Article Title: Restoration of myogenesis in ALS-myocytes through miR-26a-5p-mediated Smad4 inhibition and its impact on motor neuron development
    Article Snippet: C2C12 myoblasts were transfected with 150 nM of mirVana miRNA mimics or scrambled sequence, purchased from Life Technologies. .. Beads were harvested by centrifugation at 12,000 rpm for 20 s. Beads were washed twice with 1 mL of Lysis Buffer High Salt (Santa Cruz; sc-45001) and other two times with Wash Buffer (Santa Cruz; sc-45002). .. Beads were resuspended in the Elution Buffer (Santa Cruz; sc-45003).

    Article Title: Protein arginine methyltransferase 5 (PRMT5) is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Article Title: Endoplasmic reticulum-mitochondrion disconnection promotes metabolic reprogramming and cystogenesis in polycystic kidney disease
    Article Snippet: After tissue homogenization by Dounce tissue homogenizer, cells were lysed in lysis buffer (Santa Cruz sc-45000) and nuclei pellets were collected by centrifugation and washed once with ice-cold PBS. .. Pellets were resuspended in high salt lysis buffer (Santa Cruz, sc-45001) and sonicated on ice 30 times at 30 sec intervals. ..

    Article Title: Aβ-induced mitochondrial dysfunction in neural progenitors controls KDM5A to influence neuronal differentiation
    Article Snippet: .. Cell pellets were suspended with lysis buffer (sc-45000, Santa Cruz) and centrifuged at 3,000 rpm for 5 min. Crude nuclear extract was re-suspended with high salt lysis buffer (sc-45001, Santa Cruz) and sonicated 15 times by 30 s burst, each followed by 1 min incubation on ice. ..

    Chromatin Immunoprecipitation:

    Article Title: E protein binding at the Tcra enhancer promotes Tcra repertoire diversity
    Article Snippet: Cross-linked cells were resuspended at 20 x 10 6 cells/mL in ChIP Lysis Buffer (Santa Cruz Biotechnology, Cat. sc-45000) and incubated 5 min on ice. .. Cross-linked cells were pelleted and resuspended at 10 x 10 6 cells/mL in ChIP Lysis Buffer High Salt (Santa Cruz Biotechnology, Cat. sc-45001). .. Samples were sonicated for four cycles (30 s on, 30 s off) using a Bioruptor Pico (Diagenode).

    Article Title: PRMT5 is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Article Title: Protein arginine methyltransferase 5 (PRMT5) is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Sonication:

    Article Title: Valemetostat–SAHA-Driven Acetylation of p53 via SET/TAF-Iβ Displacement and p300 Activation Modulates Cell Cycle Regulators in Pancreatic Cancer Cells
    Article Snippet: .. The nuclei were resuspended in 1.9 mL Lysis Buffer High Salt (Santa Cruz Biotechnology Inc., Dallas, TX, USA, cat n.sc-45001) and sonicated on ice in continuous mode for 1 min 4 times every 30 s to generate DNA fragments of size ranging from 2000 to 100 bp, with the majority of them ranging between 300 and 500 bp. ..

    Article Title: Endoplasmic reticulum-mitochondrion disconnection promotes metabolic reprogramming and cystogenesis in polycystic kidney disease
    Article Snippet: After tissue homogenization by Dounce tissue homogenizer, cells were lysed in lysis buffer (Santa Cruz sc-45000) and nuclei pellets were collected by centrifugation and washed once with ice-cold PBS. .. Pellets were resuspended in high salt lysis buffer (Santa Cruz, sc-45001) and sonicated on ice 30 times at 30 sec intervals. ..

    Article Title: Aβ-induced mitochondrial dysfunction in neural progenitors controls KDM5A to influence neuronal differentiation
    Article Snippet: .. Cell pellets were suspended with lysis buffer (sc-45000, Santa Cruz) and centrifuged at 3,000 rpm for 5 min. Crude nuclear extract was re-suspended with high salt lysis buffer (sc-45001, Santa Cruz) and sonicated 15 times by 30 s burst, each followed by 1 min incubation on ice. ..

    Isolation:

    Article Title: PRMT5 is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Article Title: Protein arginine methyltransferase 5 (PRMT5) is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Centrifugation:

    Article Title: PRMT5 is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..

    Article Title: Restoration of myogenesis in ALS-myocytes through miR-26a-5p-mediated Smad4 inhibition and its impact on motor neuron development
    Article Snippet: C2C12 myoblasts were transfected with 150 nM of mirVana miRNA mimics or scrambled sequence, purchased from Life Technologies. .. Beads were harvested by centrifugation at 12,000 rpm for 20 s. Beads were washed twice with 1 mL of Lysis Buffer High Salt (Santa Cruz; sc-45001) and other two times with Wash Buffer (Santa Cruz; sc-45002). .. Beads were resuspended in the Elution Buffer (Santa Cruz; sc-45003).

    Article Title: Protein arginine methyltransferase 5 (PRMT5) is an actionable therapeutic target in CDK4/6 inhibitor-resistant ER+/RB-deficient breast cancer
    Article Snippet: .. Cells were lysed with PIPES buffer (5 mM PIPES pH 8.0, 85 mM KCl, 0.5% NP-40; Santa Cruz Biotechnology), and nuclei were isolated by centrifugation and then lysed with ChIP high salt lysis buffer (PBS, 1% NP-40, 0.5% Sodium Deoxycholate, 0.1% SDS; Santa Cruz Biotechnology). ..



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