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gene exp gapdh hs99999905 m1  (Thermo Fisher)


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    Structured Review

    Thermo Fisher gene exp gapdh hs99999905 m1
    (A) Real-Time Quantitative Reverse Transcription PCR of EGFR in D492, D492M EGFR and D492M Empty , normalized to <t>GAPDH.</t> EGFR transcription level is significantly higher in D492M EGFR compared to D492M Empty but does not reach the D492 EGFR transcription level. (B) Protein expression of EGFR, Phospho-p44/42 MAPK (ERK1/2) and Phospho-AKT determined by Western blotting. Overexpression of EGFR in D492M leads to increased protein expression of EGFR in D492M EGFR compared to D492M Empty , but EGFR protein expression does not reach the D492 level. Overexpression of EGFR in D492M leads to increased MAPK (Erk1/2) and Akt phosphorylation which is higher than in both D492M Empty and D492.
    Gene Exp Gapdh Hs99999905 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/s3+noncontact+microarray+printer/Gene+Exp%2E+GAPDH%2C+Hs99999905_m1/pmc04890760-303-35-36
    Average 99 stars, based on 1 article reviews
    gene exp gapdh hs99999905 m1 - by Bioz Stars, 2026-11
    99/100 stars

    Images

    1) Product Images from "EGFR Signal-Network Reconstruction Demonstrates Metabolic Crosstalk in EMT"

    Article Title: EGFR Signal-Network Reconstruction Demonstrates Metabolic Crosstalk in EMT

    Journal: PLoS Computational Biology

    doi: 10.1371/journal.pcbi.1004924

    (A) Real-Time Quantitative Reverse Transcription PCR of EGFR in D492, D492M EGFR and D492M Empty , normalized to GAPDH. EGFR transcription level is significantly higher in D492M EGFR compared to D492M Empty but does not reach the D492 EGFR transcription level. (B) Protein expression of EGFR, Phospho-p44/42 MAPK (ERK1/2) and Phospho-AKT determined by Western blotting. Overexpression of EGFR in D492M leads to increased protein expression of EGFR in D492M EGFR compared to D492M Empty , but EGFR protein expression does not reach the D492 level. Overexpression of EGFR in D492M leads to increased MAPK (Erk1/2) and Akt phosphorylation which is higher than in both D492M Empty and D492.
    Figure Legend Snippet: (A) Real-Time Quantitative Reverse Transcription PCR of EGFR in D492, D492M EGFR and D492M Empty , normalized to GAPDH. EGFR transcription level is significantly higher in D492M EGFR compared to D492M Empty but does not reach the D492 EGFR transcription level. (B) Protein expression of EGFR, Phospho-p44/42 MAPK (ERK1/2) and Phospho-AKT determined by Western blotting. Overexpression of EGFR in D492M leads to increased protein expression of EGFR in D492M EGFR compared to D492M Empty , but EGFR protein expression does not reach the D492 level. Overexpression of EGFR in D492M leads to increased MAPK (Erk1/2) and Akt phosphorylation which is higher than in both D492M Empty and D492.

    Techniques Used: Reverse Transcription, Expressing, Western Blot, Over Expression, Phospho-proteomics

    Predicted expression of metabolic genes regulated by AKT in D492 and D492M cells.
    Figure Legend Snippet: Predicted expression of metabolic genes regulated by AKT in D492 and D492M cells.

    Techniques Used: Expressing, Microarray, Starch

    Related Articles

    Gene Expression:

    Article Title: A Novel CIP2A and BCL-XL Clinical Diagnostic Toolkit to Predict Disease Progression and Treatment-Free Remission in Chronic Myeloid Leukaemia.
    Article Snippet: .. The relative gene expression (RQ) levels were normalised to the endogenous control, GAPDH (Thermo Scientific, Hs99999905_m1, Cat# 4331182), using the comparative method described by Schmittgen and Livak (2008) [60]. ..

    Article Title: Compositions and methods for splicing modulation of UNC13A
    Article Snippet: The following PCR probe assay for UNC13A CE synthesized at Integrated DNA technologies (IDT) were used: UNC13A_CE FWD 5′-3′ CCCCGTACCATGTCCAGTACA (SEQ ID NO: 320), UNC13A_CE REV 5′-3′ CATTCACCAGCATTTATTCAACAAA (SEQ ID NO: 321), UNC13A_CE Probe 5′-3′/56-FAM/CTGCATGAG/ZEN/CTGCCT/3IABKFQ/. .. For housekeeping gene GAPDH expression analysis was performed by using Thermofisher® TaqMan Gene Expression Assay Hs99999905_m1. ..

    Article Title: Generation of biologically responsive colon-like intestinal tissue patches from human induced pluripotent stem cells using a rapid co-differentiation platform.
    Article Snippet: Quantitative real-time-PCR (qRT-PCR) was performed on LightCycler96 (Roche) with human Gapdh used as an endogenous control. .. The IDs of Taqman Gene expression assays (Applied Biosystems) used in this study are EpCAM (Hs00901885_m1), Cdx-2 (Hs01078080_m1), Sox17 (Hs00751752_s1), Nanog (Hs02387400_g1), Klf5 (Hs00156145_m1), Wnt2b (Hs00921614_m1), BMP4 (Hs00370078_m1), GAPDH (HS99999905-m1). ..

    Article Title: Higher expression of SOX1, miR-155, and miR-21 in the colostrum of SARS-CoV-2-infected mothers.
    Article Snippet: Commercially available TagMan probes (Applied Biosystems, Pleasanton, USA; ThermofisherScientific) were used for determinations: has-miR-21- .. AR TIC LE IN PR ES S ARTICLE IN PRESS 3p (ID 002438), Mature miRNA Sequence: CAACACCAGUCGAUGGGCUGU; hsa-miR-155-5p (ID 002623) Mature miRNA Sequence: UUAAUGCUAAUCGUGAUAGGGGU; for SOX1: Hs01057642_s1 (NM_005986.2); As an endogenous control, the miRNA: RNU48 (ID 001006) (GATGACCCCAGGTAACTCTGAGTGTGTCGCTGATGCCATCACCGCAGCG CTCTGACC) was used, and the gene: GAPDH: Hs99999905_m1 (NM_002046.7). qPCR reactions were performed, including 4.5 μl (0.67 μl of cDNA from the reverse transcription reaction together with 3.83 μl of ultrapure water, free from RNase and DNase) and 0.5 μl of a probe specific for the tested gene or miRNA and 5 μl of TaqMan Gene Expression Master Mix (Applied Biosystems, Vilnius, Lithuania). ..

    Control:

    Article Title: A Novel CIP2A and BCL-XL Clinical Diagnostic Toolkit to Predict Disease Progression and Treatment-Free Remission in Chronic Myeloid Leukaemia.
    Article Snippet: .. The relative gene expression (RQ) levels were normalised to the endogenous control, GAPDH (Thermo Scientific, Hs99999905_m1, Cat# 4331182), using the comparative method described by Schmittgen and Livak (2008) [60]. ..

    Article Title: Higher expression of SOX1, miR-155, and miR-21 in the colostrum of SARS-CoV-2-infected mothers.
    Article Snippet: Commercially available TagMan probes (Applied Biosystems, Pleasanton, USA; ThermofisherScientific) were used for determinations: has-miR-21- .. AR TIC LE IN PR ES S ARTICLE IN PRESS 3p (ID 002438), Mature miRNA Sequence: CAACACCAGUCGAUGGGCUGU; hsa-miR-155-5p (ID 002623) Mature miRNA Sequence: UUAAUGCUAAUCGUGAUAGGGGU; for SOX1: Hs01057642_s1 (NM_005986.2); As an endogenous control, the miRNA: RNU48 (ID 001006) (GATGACCCCAGGTAACTCTGAGTGTGTCGCTGATGCCATCACCGCAGCG CTCTGACC) was used, and the gene: GAPDH: Hs99999905_m1 (NM_002046.7). qPCR reactions were performed, including 4.5 μl (0.67 μl of cDNA from the reverse transcription reaction together with 3.83 μl of ultrapure water, free from RNase and DNase) and 0.5 μl of a probe specific for the tested gene or miRNA and 5 μl of TaqMan Gene Expression Master Mix (Applied Biosystems, Vilnius, Lithuania). ..

    other:

    Article Title: Plasmacytoid dendritic cells modulate the production of mucosal IgA in IgA nephropathy
    Article Snippet: The levels of IgA, Gd-IgA1 and APRIL in culture supernatant were measured using IgA (Bethyl Laboratories), Gd-IgA1 (Immuno-Biological Laboratories) and APRIL (AdipoGen Life Sciences) ELISA kits according to the manufacturer’s instructions.

    Expressing:

    Article Title: Compositions and methods for splicing modulation of UNC13A
    Article Snippet: The following PCR probe assay for UNC13A CE synthesized at Integrated DNA technologies (IDT) were used: UNC13A_CE FWD 5′-3′ CCCCGTACCATGTCCAGTACA (SEQ ID NO: 320), UNC13A_CE REV 5′-3′ CATTCACCAGCATTTATTCAACAAA (SEQ ID NO: 321), UNC13A_CE Probe 5′-3′/56-FAM/CTGCATGAG/ZEN/CTGCCT/3IABKFQ/. .. For housekeeping gene GAPDH expression analysis was performed by using Thermofisher® TaqMan Gene Expression Assay Hs99999905_m1. ..

    Article Title: Cerebrospinal fluid and frontal cortex TMPRSS2 and ACE2 protein levels differ in Down syndrome and Alzheimer's disease.
    Article Snippet: .. We used the specific Thermo Fisher Scientific TaqMan probes for ACE2 (assay ID: Hs01085333_m1), TMPRSS2 (assay ID: Hs01122322_m1) and human GAPDH as a housekeeping gene (assay ID: Hs99999905_m1) to normalize expression levels of the target genes. mRNA samples with RNA Integrity Number (RIN)< 6 were excluded from the analysis. ..

    Quantitative RT-PCR:

    Article Title: Good Manufacturing Practice-Derived Human Liver Stem Cell Extracellular Vesicles Attenuate Liver Fibrosis In Vivo
    Article Snippet: .. For each well of a 96-well reaction plate, the following reagents were mixed: 5 μL of TaqMan 1-Step qRT-PCR Mix, 1 μL of Primer 1 (GAPDH—FAM), 1 μL of primers, and 11 μL of molecular grade H 2 O. Primers used were pre-built and provided by Thermo Fisher as per the following specifications: GAPDH (Hs99999905_m1): Chr.10: 88935074-88991397 on Build GRCh38. .. Dye: FAM ACTA 2 (Hs05005341_m1): Chr.12: 6534405-6538375 on Build GRCh38.

    Gene Assay:

    Article Title: Cerebrospinal fluid and frontal cortex TMPRSS2 and ACE2 protein levels differ in Down syndrome and Alzheimer's disease.
    Article Snippet: .. We used the specific Thermo Fisher Scientific TaqMan probes for ACE2 (assay ID: Hs01085333_m1), TMPRSS2 (assay ID: Hs01122322_m1) and human GAPDH as a housekeeping gene (assay ID: Hs99999905_m1) to normalize expression levels of the target genes. mRNA samples with RNA Integrity Number (RIN)< 6 were excluded from the analysis. ..

    Sequencing:

    Article Title: Higher expression of SOX1, miR-155, and miR-21 in the colostrum of SARS-CoV-2-infected mothers.
    Article Snippet: Commercially available TagMan probes (Applied Biosystems, Pleasanton, USA; ThermofisherScientific) were used for determinations: has-miR-21- .. AR TIC LE IN PR ES S ARTICLE IN PRESS 3p (ID 002438), Mature miRNA Sequence: CAACACCAGUCGAUGGGCUGU; hsa-miR-155-5p (ID 002623) Mature miRNA Sequence: UUAAUGCUAAUCGUGAUAGGGGU; for SOX1: Hs01057642_s1 (NM_005986.2); As an endogenous control, the miRNA: RNU48 (ID 001006) (GATGACCCCAGGTAACTCTGAGTGTGTCGCTGATGCCATCACCGCAGCG CTCTGACC) was used, and the gene: GAPDH: Hs99999905_m1 (NM_002046.7). qPCR reactions were performed, including 4.5 μl (0.67 μl of cDNA from the reverse transcription reaction together with 3.83 μl of ultrapure water, free from RNase and DNase) and 0.5 μl of a probe specific for the tested gene or miRNA and 5 μl of TaqMan Gene Expression Master Mix (Applied Biosystems, Vilnius, Lithuania). ..

    Real-time Polymerase Chain Reaction:

    Article Title: Higher expression of SOX1, miR-155, and miR-21 in the colostrum of SARS-CoV-2-infected mothers.
    Article Snippet: Commercially available TagMan probes (Applied Biosystems, Pleasanton, USA; ThermofisherScientific) were used for determinations: has-miR-21- .. AR TIC LE IN PR ES S ARTICLE IN PRESS 3p (ID 002438), Mature miRNA Sequence: CAACACCAGUCGAUGGGCUGU; hsa-miR-155-5p (ID 002623) Mature miRNA Sequence: UUAAUGCUAAUCGUGAUAGGGGU; for SOX1: Hs01057642_s1 (NM_005986.2); As an endogenous control, the miRNA: RNU48 (ID 001006) (GATGACCCCAGGTAACTCTGAGTGTGTCGCTGATGCCATCACCGCAGCG CTCTGACC) was used, and the gene: GAPDH: Hs99999905_m1 (NM_002046.7). qPCR reactions were performed, including 4.5 μl (0.67 μl of cDNA from the reverse transcription reaction together with 3.83 μl of ultrapure water, free from RNase and DNase) and 0.5 μl of a probe specific for the tested gene or miRNA and 5 μl of TaqMan Gene Expression Master Mix (Applied Biosystems, Vilnius, Lithuania). ..

    Reverse Transcription:

    Article Title: Higher expression of SOX1, miR-155, and miR-21 in the colostrum of SARS-CoV-2-infected mothers.
    Article Snippet: Commercially available TagMan probes (Applied Biosystems, Pleasanton, USA; ThermofisherScientific) were used for determinations: has-miR-21- .. AR TIC LE IN PR ES S ARTICLE IN PRESS 3p (ID 002438), Mature miRNA Sequence: CAACACCAGUCGAUGGGCUGU; hsa-miR-155-5p (ID 002623) Mature miRNA Sequence: UUAAUGCUAAUCGUGAUAGGGGU; for SOX1: Hs01057642_s1 (NM_005986.2); As an endogenous control, the miRNA: RNU48 (ID 001006) (GATGACCCCAGGTAACTCTGAGTGTGTCGCTGATGCCATCACCGCAGCG CTCTGACC) was used, and the gene: GAPDH: Hs99999905_m1 (NM_002046.7). qPCR reactions were performed, including 4.5 μl (0.67 μl of cDNA from the reverse transcription reaction together with 3.83 μl of ultrapure water, free from RNase and DNase) and 0.5 μl of a probe specific for the tested gene or miRNA and 5 μl of TaqMan Gene Expression Master Mix (Applied Biosystems, Vilnius, Lithuania). ..



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    Image Search Results


    Microarray analysis reveals the effects of GFAP mAb treatment on key inflammatory mediators in glaucomatous retina. ( A - C ) The expression of TLR4 and S100A8 was significantly downregulated by 25–50 µg GFAP mAb treatment compared to the vehicle. The marker for microglial activation, CD68, was significantly decreased in the 25 µg GFAP mAb treatment group. ( D - F ) Proteins of the inflammasome pathway, NLRP3, GSDMD and Caspase-1 were significantly downregulated in the 25 µg GFAP mAb treatment group. With the 50 µg dose, these protein expressions showed a similar downward trend, but without statistical significance. ( G ) Expression profiling of inflammation-associated mediators showed that 25 µg GFAP mAb significantly decreased pro-inflammatory factors (TNF-α, IL-1β, IL-8, MMP9, and IFN-γ), and increased the anti-inflammatory cytokine IL-10 compared to the vehicle group. In contrast, the 50 µg dose significantly reduced IFN-γ only. ( H ) Representative images of spots showing IL-1β levels in the subarrays for each group. Image analysis was conducted with Imagene software, using the median intensity from each spot to calculate the mean of the triplicate spots for each marker. For CD68 and TLR4, due to significant heterogeneity in SDs, statistical analysis was performed using Welch’s ANOVA followed by the Tamhane T2 post hoc test. All other data were analyzed using one-way ANOVA with Tukey’s post hoc test. Data are presented as the mean ± SD; n = 4 per group; * p < 0.05, ** p < 0.01, *** p < 0.001; ns = not significant. TLR4 – Toll-Like Receptor 4. S100A8 – S100 Calcium Binding Protein A8. NLRP3 – NLR Family Pyrin Domain Containing 3. GSDMD – Gasdermin D

    Journal: Journal of Neuroinflammation

    Article Title: Targeting glial fibrillary acidic protein in glaucoma: a monoclonal antibody approach to modulate glial reactivity and neuroinflammation for neuroprotection

    doi: 10.1186/s12974-025-03482-8

    Figure Lengend Snippet: Microarray analysis reveals the effects of GFAP mAb treatment on key inflammatory mediators in glaucomatous retina. ( A - C ) The expression of TLR4 and S100A8 was significantly downregulated by 25–50 µg GFAP mAb treatment compared to the vehicle. The marker for microglial activation, CD68, was significantly decreased in the 25 µg GFAP mAb treatment group. ( D - F ) Proteins of the inflammasome pathway, NLRP3, GSDMD and Caspase-1 were significantly downregulated in the 25 µg GFAP mAb treatment group. With the 50 µg dose, these protein expressions showed a similar downward trend, but without statistical significance. ( G ) Expression profiling of inflammation-associated mediators showed that 25 µg GFAP mAb significantly decreased pro-inflammatory factors (TNF-α, IL-1β, IL-8, MMP9, and IFN-γ), and increased the anti-inflammatory cytokine IL-10 compared to the vehicle group. In contrast, the 50 µg dose significantly reduced IFN-γ only. ( H ) Representative images of spots showing IL-1β levels in the subarrays for each group. Image analysis was conducted with Imagene software, using the median intensity from each spot to calculate the mean of the triplicate spots for each marker. For CD68 and TLR4, due to significant heterogeneity in SDs, statistical analysis was performed using Welch’s ANOVA followed by the Tamhane T2 post hoc test. All other data were analyzed using one-way ANOVA with Tukey’s post hoc test. Data are presented as the mean ± SD; n = 4 per group; * p < 0.05, ** p < 0.01, *** p < 0.001; ns = not significant. TLR4 – Toll-Like Receptor 4. S100A8 – S100 Calcium Binding Protein A8. NLRP3 – NLR Family Pyrin Domain Containing 3. GSDMD – Gasdermin D

    Article Snippet: Briefly, the microarray was prepared using a noncontact microarray printer (SciFLEXARRAYER S3; Scienion, Berlin, Germany).

    Techniques: Microarray, Expressing, Marker, Activation Assay, Software, Binding Assay

    Probing receptor binding specificities of A(H3N2) and A(H1N1)pdm09. a) Collection of glycans printed on succinimide reactive microarray slides. Glycan binding data of b) early A(H3N2) and A(H3N2) 3C.2 viruses; c) A (H3N2) 3C.3 viruses; and d) A(H1N1)pdm09 viruses. Whole viruses were exposed to a glycan microarray, and binding was visualized antistalk antibodies. Bars represent the average relative fluorescence units (RFU) of four replicates ± SD.

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    Article Title: Asymmetrical Biantennary Glycans Prepared by a Stop-and-Go Strategy Reveal Receptor Binding Evolution of Human Influenza A Viruses

    doi: 10.1021/jacsau.3c00695

    Figure Lengend Snippet: Probing receptor binding specificities of A(H3N2) and A(H1N1)pdm09. a) Collection of glycans printed on succinimide reactive microarray slides. Glycan binding data of b) early A(H3N2) and A(H3N2) 3C.2 viruses; c) A (H3N2) 3C.3 viruses; and d) A(H1N1)pdm09 viruses. Whole viruses were exposed to a glycan microarray, and binding was visualized antistalk antibodies. Bars represent the average relative fluorescence units (RFU) of four replicates ± SD.

    Article Snippet: The glycans, which have an α-amine at the anomeric asparagine moiety, were printed on amine reactive NHS activated glass slides using a noncontact microarray printer ( S3 , Scienion, Inc.).

    Techniques: Binding Assay, Microarray, Glycoproteomics, Fluorescence