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rnaseq data processing protocol  (GeneLAB GmbH)

 
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    GeneLAB GmbH rnaseq data processing protocol
    Rnaseq Data Processing Protocol, supplied by GeneLAB GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rna-seq+protocols/rnaseq+data+processing+protocol/pmc09576569-234-0-7
    Average 90 stars, based on 1 article reviews
    rnaseq data processing protocol - by Bioz Stars, 2026-11
    90/100 stars

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    other:

    Article Title: Muscle atrophy phenotype gene expression during spaceflight is linked to a metabolic crosstalk in both the liver and the muscle in mice
    Article Snippet: Raw FASTQ files were proceed using the “GeneLab RNAseq data processing protocol” as reported at https://genelab-data.ndc.nasa.gov/genelab/accession/GLDS-103/ and https://genelab-data.ndc.nasa.gov/genelab/accession/GLDS-168 .



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    Differential MsMYBs expression in anther development stages. ( A ) Venn diagram displaying the intersection of significantly up-regulated and down-regulated DEGs between stages S9, S10, and S11. ( B ) Heatmaps and principal component analysis (PCA) reveal the relationships between <t>transcriptomes.</t> ( C ) GO enrichment bubble chart of upregulated DEGs during stages S9, S10, and S11. ( D ) Expression patterns of MsMYBs during anther development. Color scales with Z scores beside the heatmap indicate gene expression levels, with low and high transcript abundance indicated by blue and red, respectively. Error bars represent standard deviation, and asterisks denote significant differences between control and treatments, with * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
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    Differential MsMYBs expression in anther development stages. ( A ) Venn diagram displaying the intersection of significantly up-regulated and down-regulated DEGs between stages S9, S10, and S11. ( B ) Heatmaps and principal component analysis (PCA) reveal the relationships between transcriptomes. ( C ) GO enrichment bubble chart of upregulated DEGs during stages S9, S10, and S11. ( D ) Expression patterns of MsMYBs during anther development. Color scales with Z scores beside the heatmap indicate gene expression levels, with low and high transcript abundance indicated by blue and red, respectively. Error bars represent standard deviation, and asterisks denote significant differences between control and treatments, with * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001

    Journal: BMC Plant Biology

    Article Title: Genome-wide identification of the Medicago sativa L. MYB family and its transcriptional dynamics during pollen development

    doi: 10.1186/s12870-025-06542-6

    Figure Lengend Snippet: Differential MsMYBs expression in anther development stages. ( A ) Venn diagram displaying the intersection of significantly up-regulated and down-regulated DEGs between stages S9, S10, and S11. ( B ) Heatmaps and principal component analysis (PCA) reveal the relationships between transcriptomes. ( C ) GO enrichment bubble chart of upregulated DEGs during stages S9, S10, and S11. ( D ) Expression patterns of MsMYBs during anther development. Color scales with Z scores beside the heatmap indicate gene expression levels, with low and high transcript abundance indicated by blue and red, respectively. Error bars represent standard deviation, and asterisks denote significant differences between control and treatments, with * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001

    Article Snippet: Construction of transcriptome libraries adhered to the Illumina RNA-seq protocol (Illumina, Inc., San Diego, CA, catalog no. RS-100-0801).

    Techniques: Expressing, Gene Expression, Standard Deviation, Control