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Genechem rna-seq analysis and data processing
Rna Seq Analysis And Data Processing, supplied by Genechem, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/rna-seq+analysis+and+data+processing/rna+seq/pm38943969-149-3-8
Average 90 stars, based on 1 article reviews
rna-seq analysis and data processing - by Bioz Stars, 2026-09
90/100 stars

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cDNA Library Assay:

Article Title: Sirtuin 1 underlies depression-related behaviors by modulating the serotonin system in the dorsal raphe nucleus in female mice.
Article Snippet: Major depressive disorder (MDD) is a primary driver of disability and greatly escalates the worldwide disease burden.. Sirtuin 1 (Sirt1), a key regulator of cellular metabolism, is associated with genetic variations in MDD.. We investigated how Sirt1 in serotonin (5-HT) neurons within the dorsal raphe nucleus (DRN) in mice affected behaviors associated with depression and susceptibility to stress.

Article Title: Metformin upregulates circadian gene PER2 to inhibit growth and enhance the sensitivity of glioblastoma cell lines to radiotherapy via SIRT2/G6PD pathway
Article Snippet: RNA Seq was performed by Genechem Technology Co., Ltd. (Shanghai, China).

Article Title: METTL3-dependent epigenetic regulation of ULK2 autophagy in hypertrophic scarring.
Article Snippet: Increased autophagy in fibroblasts drives their differentiation into myofibroblasts, a key process in dermal fibrosis during hypertrophic scar (HS) progression.. While N6-methyladenosine (m6A) modification is implicated in fibrosis and autophagy, its mechanistic role in HS remains unclear.. In this study, we investigated the involvement of fibroblast autophagy in HS progression and the regulatory mechanisms underlying this process.

Article Title: Fusion of glioma-associated mesenchymal stem/stromal cells with glioma cells promotes macrophage recruitment and M2 polarization via m 6 A modification of CSF1
Article Snippet: Both mRNA-seq and m 6 A -seq were then performed simultaneously (GeneChem, China).

Article Title: Paeonol ameliorates diabetic nephropathy by promoting TFEB-mediated lysosome biogenesis and lipophagy.
Article Snippet: Rationale: Diabetic nephropathy (DN) is a significant clinical and public health burden worldwide whose magnitude underscores the urgent need for more effective treatment options.. Excessive lipid accumulation in renal tubular cells leads to their injury and dysfunction, thereby contributing to DN progression, suggesting that the alleviation of renal tubular lipid accumulation is a potential strategy for treating DN.. Methods: The effects of paeonol (PAE), a natural phenolic compound, on renal tubular lipid accumulation were evaluated using a glucolipotoxicity-treated HK-2 cell line and C57BL/6 J mice treated with streptozotocin (STZ) injection combined with a high-fat diet (HFD).

Article Title: SIRPα modulates microglial efferocytosis and neuroinflammation following experimental subarachnoid hemorrhage via the SHP1/STAT6 axis.
Article Snippet: The RNA-seq and analysis was carried out at Genechem Co., Ltd (Shanghai, China).

Article Title: Bioactive components of Jiedu Sangen decoction against colorectal cancer: A novel and comprehensive research strategy for natural drug development.
Article Snippet: Background: Jiedu Sangen Decoction (JSD) is widely used in the treatment of colorectal cancer (CRC) patients in southern China due to its good clinical efficacy, but the effective active ingredients are still unknown.. Purpose: This study fully explored the bioactive components of JSD based on an innovative and comprehensive research strategy.. Using advanced computer technology (e.g., machine learning AHP-SOM algorithm and molecular dynamics simulation) to identify the most promising bioactive components and key targets in JSD, in order to provide new perspectives for the development of natural drugs.

RNA Sequencing:

Article Title: Sirtuin 1 underlies depression-related behaviors by modulating the serotonin system in the dorsal raphe nucleus in female mice.
Article Snippet: Major depressive disorder (MDD) is a primary driver of disability and greatly escalates the worldwide disease burden.. Sirtuin 1 (Sirt1), a key regulator of cellular metabolism, is associated with genetic variations in MDD.. We investigated how Sirt1 in serotonin (5-HT) neurons within the dorsal raphe nucleus (DRN) in mice affected behaviors associated with depression and susceptibility to stress.

Article Title: Metformin upregulates circadian gene PER2 to inhibit growth and enhance the sensitivity of glioblastoma cell lines to radiotherapy via SIRT2/G6PD pathway
Article Snippet: RNA Seq was performed by Genechem Technology Co., Ltd. (Shanghai, China).

Article Title: METTL3-dependent epigenetic regulation of ULK2 autophagy in hypertrophic scarring.
Article Snippet: Increased autophagy in fibroblasts drives their differentiation into myofibroblasts, a key process in dermal fibrosis during hypertrophic scar (HS) progression.. While N6-methyladenosine (m6A) modification is implicated in fibrosis and autophagy, its mechanistic role in HS remains unclear.. In this study, we investigated the involvement of fibroblast autophagy in HS progression and the regulatory mechanisms underlying this process.

Article Title: Fusion of glioma-associated mesenchymal stem/stromal cells with glioma cells promotes macrophage recruitment and M2 polarization via m 6 A modification of CSF1
Article Snippet: Both mRNA-seq and m 6 A -seq were then performed simultaneously (GeneChem, China).

Article Title: Paeonol ameliorates diabetic nephropathy by promoting TFEB-mediated lysosome biogenesis and lipophagy.
Article Snippet: Rationale: Diabetic nephropathy (DN) is a significant clinical and public health burden worldwide whose magnitude underscores the urgent need for more effective treatment options.. Excessive lipid accumulation in renal tubular cells leads to their injury and dysfunction, thereby contributing to DN progression, suggesting that the alleviation of renal tubular lipid accumulation is a potential strategy for treating DN.. Methods: The effects of paeonol (PAE), a natural phenolic compound, on renal tubular lipid accumulation were evaluated using a glucolipotoxicity-treated HK-2 cell line and C57BL/6 J mice treated with streptozotocin (STZ) injection combined with a high-fat diet (HFD).

Article Title: SIRPα modulates microglial efferocytosis and neuroinflammation following experimental subarachnoid hemorrhage via the SHP1/STAT6 axis.
Article Snippet: The RNA-seq and analysis was carried out at Genechem Co., Ltd (Shanghai, China).

Article Title: Bioactive components of Jiedu Sangen decoction against colorectal cancer: A novel and comprehensive research strategy for natural drug development.
Article Snippet: Background: Jiedu Sangen Decoction (JSD) is widely used in the treatment of colorectal cancer (CRC) patients in southern China due to its good clinical efficacy, but the effective active ingredients are still unknown.. Purpose: This study fully explored the bioactive components of JSD based on an innovative and comprehensive research strategy.. Using advanced computer technology (e.g., machine learning AHP-SOM algorithm and molecular dynamics simulation) to identify the most promising bioactive components and key targets in JSD, in order to provide new perspectives for the development of natural drugs.

Knockdown:

Article Title: Sirtuin 1 underlies depression-related behaviors by modulating the serotonin system in the dorsal raphe nucleus in female mice.
Article Snippet: Major depressive disorder (MDD) is a primary driver of disability and greatly escalates the worldwide disease burden.. Sirtuin 1 (Sirt1), a key regulator of cellular metabolism, is associated with genetic variations in MDD.. We investigated how Sirt1 in serotonin (5-HT) neurons within the dorsal raphe nucleus (DRN) in mice affected behaviors associated with depression and susceptibility to stress.

Article Title: Metformin upregulates circadian gene PER2 to inhibit growth and enhance the sensitivity of glioblastoma cell lines to radiotherapy via SIRT2/G6PD pathway
Article Snippet: RNA Seq was performed by Genechem Technology Co., Ltd. (Shanghai, China).

Article Title: METTL3-dependent epigenetic regulation of ULK2 autophagy in hypertrophic scarring.
Article Snippet: Increased autophagy in fibroblasts drives their differentiation into myofibroblasts, a key process in dermal fibrosis during hypertrophic scar (HS) progression.. While N6-methyladenosine (m6A) modification is implicated in fibrosis and autophagy, its mechanistic role in HS remains unclear.. In this study, we investigated the involvement of fibroblast autophagy in HS progression and the regulatory mechanisms underlying this process.

Article Title: Fusion of glioma-associated mesenchymal stem/stromal cells with glioma cells promotes macrophage recruitment and M2 polarization via m 6 A modification of CSF1
Article Snippet: Both mRNA-seq and m 6 A -seq were then performed simultaneously (GeneChem, China).

Article Title: Paeonol ameliorates diabetic nephropathy by promoting TFEB-mediated lysosome biogenesis and lipophagy.
Article Snippet: Rationale: Diabetic nephropathy (DN) is a significant clinical and public health burden worldwide whose magnitude underscores the urgent need for more effective treatment options.. Excessive lipid accumulation in renal tubular cells leads to their injury and dysfunction, thereby contributing to DN progression, suggesting that the alleviation of renal tubular lipid accumulation is a potential strategy for treating DN.. Methods: The effects of paeonol (PAE), a natural phenolic compound, on renal tubular lipid accumulation were evaluated using a glucolipotoxicity-treated HK-2 cell line and C57BL/6 J mice treated with streptozotocin (STZ) injection combined with a high-fat diet (HFD).

Article Title: SIRPα modulates microglial efferocytosis and neuroinflammation following experimental subarachnoid hemorrhage via the SHP1/STAT6 axis.
Article Snippet: The RNA-seq and analysis was carried out at Genechem Co., Ltd (Shanghai, China).

Article Title: Bioactive components of Jiedu Sangen decoction against colorectal cancer: A novel and comprehensive research strategy for natural drug development.
Article Snippet: Background: Jiedu Sangen Decoction (JSD) is widely used in the treatment of colorectal cancer (CRC) patients in southern China due to its good clinical efficacy, but the effective active ingredients are still unknown.. Purpose: This study fully explored the bioactive components of JSD based on an innovative and comprehensive research strategy.. Using advanced computer technology (e.g., machine learning AHP-SOM algorithm and molecular dynamics simulation) to identify the most promising bioactive components and key targets in JSD, in order to provide new perspectives for the development of natural drugs.

Sequencing:

Article Title: Sirtuin 1 underlies depression-related behaviors by modulating the serotonin system in the dorsal raphe nucleus in female mice.
Article Snippet: Major depressive disorder (MDD) is a primary driver of disability and greatly escalates the worldwide disease burden.. Sirtuin 1 (Sirt1), a key regulator of cellular metabolism, is associated with genetic variations in MDD.. We investigated how Sirt1 in serotonin (5-HT) neurons within the dorsal raphe nucleus (DRN) in mice affected behaviors associated with depression and susceptibility to stress.

Article Title: Metformin upregulates circadian gene PER2 to inhibit growth and enhance the sensitivity of glioblastoma cell lines to radiotherapy via SIRT2/G6PD pathway
Article Snippet: RNA Seq was performed by Genechem Technology Co., Ltd. (Shanghai, China).

Article Title: METTL3-dependent epigenetic regulation of ULK2 autophagy in hypertrophic scarring.
Article Snippet: Increased autophagy in fibroblasts drives their differentiation into myofibroblasts, a key process in dermal fibrosis during hypertrophic scar (HS) progression.. While N6-methyladenosine (m6A) modification is implicated in fibrosis and autophagy, its mechanistic role in HS remains unclear.. In this study, we investigated the involvement of fibroblast autophagy in HS progression and the regulatory mechanisms underlying this process.

Article Title: Fusion of glioma-associated mesenchymal stem/stromal cells with glioma cells promotes macrophage recruitment and M2 polarization via m 6 A modification of CSF1
Article Snippet: Both mRNA-seq and m 6 A -seq were then performed simultaneously (GeneChem, China).

Article Title: Paeonol ameliorates diabetic nephropathy by promoting TFEB-mediated lysosome biogenesis and lipophagy.
Article Snippet: Rationale: Diabetic nephropathy (DN) is a significant clinical and public health burden worldwide whose magnitude underscores the urgent need for more effective treatment options.. Excessive lipid accumulation in renal tubular cells leads to their injury and dysfunction, thereby contributing to DN progression, suggesting that the alleviation of renal tubular lipid accumulation is a potential strategy for treating DN.. Methods: The effects of paeonol (PAE), a natural phenolic compound, on renal tubular lipid accumulation were evaluated using a glucolipotoxicity-treated HK-2 cell line and C57BL/6 J mice treated with streptozotocin (STZ) injection combined with a high-fat diet (HFD).

Article Title: SIRPα modulates microglial efferocytosis and neuroinflammation following experimental subarachnoid hemorrhage via the SHP1/STAT6 axis.
Article Snippet: The RNA-seq and analysis was carried out at Genechem Co., Ltd (Shanghai, China).

Article Title: Bioactive components of Jiedu Sangen decoction against colorectal cancer: A novel and comprehensive research strategy for natural drug development.
Article Snippet: Background: Jiedu Sangen Decoction (JSD) is widely used in the treatment of colorectal cancer (CRC) patients in southern China due to its good clinical efficacy, but the effective active ingredients are still unknown.. Purpose: This study fully explored the bioactive components of JSD based on an innovative and comprehensive research strategy.. Using advanced computer technology (e.g., machine learning AHP-SOM algorithm and molecular dynamics simulation) to identify the most promising bioactive components and key targets in JSD, in order to provide new perspectives for the development of natural drugs.



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