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celera’s human snp reference database  (Celera)

 
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    Structured Review

    Celera celera’s human snp reference database
    Celera’s Human Snp Reference Database, supplied by Celera, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/reference+snp+data/celera+snps/pmc01634802-35-19-18
    Average 90 stars, based on 1 article reviews
    celera’s human snp reference database - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    In Silico:

    Article Title: ESR1 and EGF genetic variation in relation to breast cancer risk and survival
    Article Snippet: We selected SNPs in the ESR1 and EGF genes and their 20 kb flanking sequences from dbSNP (build 124, [ ]) and Celera databases, aiming for an initial marker density of at least one SNP per 5 kb.

    Article Title: Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases
    Article Snippet: In this new version of PupaSuite, the database has been updated to analyze the complete set of SNPs cataloged in version 44 of Ensembl , which includes dbSNP ( ) 126 genotype data and Sanger-caller Celera SNPs.

    Article Title: Methods for placing, accepting, and filling orders for products and services
    Article Snippet: Gene Symbol LocusLink Gene Name RefSeq Accession AB Assay ID Celera SNP (hCV) Celera gene (hCG) Celera transcript (hCT) Celera protein (hCP) Chromosome Cytoband LocusLink ID In addition, it is possible to filter the search by the specific SNP type which include: acceptor splice site coding region donor splice site intergenic/unknown intron mis-sense mutation nonsense mutation putative utr (untranslated region) 3 putative utr 5 repeats silent mutation utr 3 utr 5 In addition, it is possible to search all these SNP types together.

    Article Title: Roles of the ubiquitin peptidase USP18 in multiple sclerosis and the response to interferon-β treatment.
    Article Snippet: the response to interferon-b treatment S. Malhotra, C. Morcillo-Su arez, R. Nurtdinov, J. Rio, E. Sarro, M. Moreno, J. Castill o, A. Navarro, X. Montalban and M. Comabella Servei de Neurologia/Neuroimmunologia, Centre d’Esclerosi M ultiple de Catalunya (CEM-Cat), Hospital Universitari Vall d′Hebron (HUVH), Barcelona; Institute of Evolutionary Biology (UPF-CSIC), Barcelona; National Institute for Bioinformatics, Universitat Pompeu Fabra, Barcelona; Fisiopatolog ıa Renal, VHIR – CIBBIM, Nanomedicina, Barcelona; and Instituci o Catalana de Recerca i Estudis Avancats (ICREA), Barcelona, Spain

    Article Title: Genome assembly comparison identifies structural variants in the human genome
    Article Snippet: First, we found 1,521,291 of 1,591,291 (95.6%) single-nucleotide mismatches to be present in dbSNP; 840,802 of these were Celera-based SNPs, whereas the others were from different projects.

    Binding Assay:

    Article Title: ESR1 and EGF genetic variation in relation to breast cancer risk and survival
    Article Snippet: We selected SNPs in the ESR1 and EGF genes and their 20 kb flanking sequences from dbSNP (build 124, [ ]) and Celera databases, aiming for an initial marker density of at least one SNP per 5 kb.

    Article Title: Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases
    Article Snippet: In this new version of PupaSuite, the database has been updated to analyze the complete set of SNPs cataloged in version 44 of Ensembl , which includes dbSNP ( ) 126 genotype data and Sanger-caller Celera SNPs.

    Article Title: Methods for placing, accepting, and filling orders for products and services
    Article Snippet: Gene Symbol LocusLink Gene Name RefSeq Accession AB Assay ID Celera SNP (hCV) Celera gene (hCG) Celera transcript (hCT) Celera protein (hCP) Chromosome Cytoband LocusLink ID In addition, it is possible to filter the search by the specific SNP type which include: acceptor splice site coding region donor splice site intergenic/unknown intron mis-sense mutation nonsense mutation putative utr (untranslated region) 3 putative utr 5 repeats silent mutation utr 3 utr 5 In addition, it is possible to search all these SNP types together.

    Article Title: Roles of the ubiquitin peptidase USP18 in multiple sclerosis and the response to interferon-β treatment.
    Article Snippet: the response to interferon-b treatment S. Malhotra, C. Morcillo-Su arez, R. Nurtdinov, J. Rio, E. Sarro, M. Moreno, J. Castill o, A. Navarro, X. Montalban and M. Comabella Servei de Neurologia/Neuroimmunologia, Centre d’Esclerosi M ultiple de Catalunya (CEM-Cat), Hospital Universitari Vall d′Hebron (HUVH), Barcelona; Institute of Evolutionary Biology (UPF-CSIC), Barcelona; National Institute for Bioinformatics, Universitat Pompeu Fabra, Barcelona; Fisiopatolog ıa Renal, VHIR – CIBBIM, Nanomedicina, Barcelona; and Instituci o Catalana de Recerca i Estudis Avancats (ICREA), Barcelona, Spain

    Article Title: Genome assembly comparison identifies structural variants in the human genome
    Article Snippet: First, we found 1,521,291 of 1,591,291 (95.6%) single-nucleotide mismatches to be present in dbSNP; 840,802 of these were Celera-based SNPs, whereas the others were from different projects.

    Functional Assay:

    Article Title: ESR1 and EGF genetic variation in relation to breast cancer risk and survival
    Article Snippet: We selected SNPs in the ESR1 and EGF genes and their 20 kb flanking sequences from dbSNP (build 124, [ ]) and Celera databases, aiming for an initial marker density of at least one SNP per 5 kb.

    Article Title: Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases
    Article Snippet: In this new version of PupaSuite, the database has been updated to analyze the complete set of SNPs cataloged in version 44 of Ensembl , which includes dbSNP ( ) 126 genotype data and Sanger-caller Celera SNPs.

    Article Title: Methods for placing, accepting, and filling orders for products and services
    Article Snippet: Gene Symbol LocusLink Gene Name RefSeq Accession AB Assay ID Celera SNP (hCV) Celera gene (hCG) Celera transcript (hCT) Celera protein (hCP) Chromosome Cytoband LocusLink ID In addition, it is possible to filter the search by the specific SNP type which include: acceptor splice site coding region donor splice site intergenic/unknown intron mis-sense mutation nonsense mutation putative utr (untranslated region) 3 putative utr 5 repeats silent mutation utr 3 utr 5 In addition, it is possible to search all these SNP types together.

    Article Title: Roles of the ubiquitin peptidase USP18 in multiple sclerosis and the response to interferon-β treatment.
    Article Snippet: the response to interferon-b treatment S. Malhotra, C. Morcillo-Su arez, R. Nurtdinov, J. Rio, E. Sarro, M. Moreno, J. Castill o, A. Navarro, X. Montalban and M. Comabella Servei de Neurologia/Neuroimmunologia, Centre d’Esclerosi M ultiple de Catalunya (CEM-Cat), Hospital Universitari Vall d′Hebron (HUVH), Barcelona; Institute of Evolutionary Biology (UPF-CSIC), Barcelona; National Institute for Bioinformatics, Universitat Pompeu Fabra, Barcelona; Fisiopatolog ıa Renal, VHIR – CIBBIM, Nanomedicina, Barcelona; and Instituci o Catalana de Recerca i Estudis Avancats (ICREA), Barcelona, Spain

    Article Title: Genome assembly comparison identifies structural variants in the human genome
    Article Snippet: First, we found 1,521,291 of 1,591,291 (95.6%) single-nucleotide mismatches to be present in dbSNP; 840,802 of these were Celera-based SNPs, whereas the others were from different projects.



    Similar Products

    reference snp data  (Biotechnology Information)
    86
    Biotechnology Information reference snp data
    A Study design and participant selection. Information of the Arao cohort included MMSE score, diagnostic status, genome-wide <t>SNP</t> <t>data,</t> and APOE genotype. Of 1,526 baseline participants, 1,521 with consent for genetic analysis were selected and subjected to principal component analysis (PCA). After quality control, 1,310 participants were retained for PRS construction. Participants with complete data were included in subsequent analyses ( N = 1,301). B Scatter plot of the first and second principal components (PCs) for study participants ( N = 1,521) and the 1000 Genomes project samples ( N = 2,504). Each point represents an individual based on genome-wide SNP data and is colored by population: AFR, African; AMR, Admixed American; EAS, East Asian; SAS, South Asian; EUR, European.
    Reference Snp Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/reference+snp+data/reference+report+snp/med_rxiv__64898__2026__03__26__26349120-62-8-23
    Average 86 stars, based on 1 article reviews
    reference snp data - by Bioz Stars, 2026-10
    86/100 stars
    		  Buy from Supplier
    human snp reference data database  (Celera)
    90
    Celera human snp reference data database
    A Study design and participant selection. Information of the Arao cohort included MMSE score, diagnostic status, genome-wide <t>SNP</t> <t>data,</t> and APOE genotype. Of 1,526 baseline participants, 1,521 with consent for genetic analysis were selected and subjected to principal component analysis (PCA). After quality control, 1,310 participants were retained for PRS construction. Participants with complete data were included in subsequent analyses ( N = 1,301). B Scatter plot of the first and second principal components (PCs) for study participants ( N = 1,521) and the 1000 Genomes project samples ( N = 2,504). Each point represents an individual based on genome-wide SNP data and is colored by population: AFR, African; AMR, Admixed American; EAS, East Asian; SAS, South Asian; EUR, European.
    Human Snp Reference Data Database, supplied by Celera, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/reference+snp+data/human+snp+database/us09464320-564-26-25
    Average 90 stars, based on 1 article reviews
    human snp reference data database - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    A Study design and participant selection. Information of the Arao cohort included MMSE score, diagnostic status, genome-wide SNP data, and APOE genotype. Of 1,526 baseline participants, 1,521 with consent for genetic analysis were selected and subjected to principal component analysis (PCA). After quality control, 1,310 participants were retained for PRS construction. Participants with complete data were included in subsequent analyses ( N = 1,301). B Scatter plot of the first and second principal components (PCs) for study participants ( N = 1,521) and the 1000 Genomes project samples ( N = 2,504). Each point represents an individual based on genome-wide SNP data and is colored by population: AFR, African; AMR, Admixed American; EAS, East Asian; SAS, South Asian; EUR, European.

    Journal: medRxiv

    Article Title: Population-specific polygenic risk for Alzheimer’s disease is associated with Mini-Mental State Examination-based cognitive decline in a Japanese cohort

    doi: 10.64898/2026.03.26.26349120

    Figure Lengend Snippet: A Study design and participant selection. Information of the Arao cohort included MMSE score, diagnostic status, genome-wide SNP data, and APOE genotype. Of 1,526 baseline participants, 1,521 with consent for genetic analysis were selected and subjected to principal component analysis (PCA). After quality control, 1,310 participants were retained for PRS construction. Participants with complete data were included in subsequent analyses ( N = 1,301). B Scatter plot of the first and second principal components (PCs) for study participants ( N = 1,521) and the 1000 Genomes project samples ( N = 2,504). Each point represents an individual based on genome-wide SNP data and is colored by population: AFR, African; AMR, Admixed American; EAS, East Asian; SAS, South Asian; EUR, European.

    Article Snippet: Curation of SNP data was conducted using a reference SNP data (GCF_000001405.25.vcf.gz) in Variant Call Format (VCF) downloaded from the National Center for Biotechnology Information (NCBI) dbSNP FTP site ( https://ftp.ncbi.nih.gov/snp/latest_release/VCF/ ) ( , ) and dbSNP 147 summarized data from ANNOVAR ( ).

    Techniques: Selection, Diagnostic Assay, Genome Wide, Control