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Gallus BioPharmaceuticals hisat2
Hisat2, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/reference+sequence+(refseq)+and+annotations/hisat2/pm37667318-109-8-7
Average 90 stars, based on 1 article reviews
hisat2 - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

other:

Article Title: Tailoring UPS-to-autophagy transition to restore RGC prosperity and functionality in a rodent traumatic optic neuropathy model.
Article Snippet: Direct or indirect injury to the optic nerve can lead to traumatic optic neuropathy (TON), a pathological process eventually resulting in long-term vision loss.. Experimentally, optic nerve crush (ONC) simulates TON by inducing retinal ganglion cell (RGC) apoptosis and vision loss.. This study investigates the neuroprotective effect of a HECT domain-E3 ubiquitin ligase inhibitor, Compound 056, on retinal ganglion cells after traumatic injury.

Article Title: Dynamic m 6 A Modification Landscape During the Egg Laying Process of Chickens.
Article Snippet: Clean reads were mapped to the Gallus gallus (chicken) reference genome using HISAT2 (v2.1.0) [42].

Article Title: Liver Transcriptome Analysis Reveals a Potential Mechanism of Heat Stress Increasing Susceptibility to Salmonella Typhimurium in Chickens.
Article Snippet: Filtered reads were aligned to the Gallus gallus 6.0 reference genome using HISAT2 v2.1.0 [17].

Article Title: Liver Transcriptome Analysis Reveals a Potential Mechanism of Heat Stress Increasing Susceptibility to Salmonella Typhimurium in Chickens
Article Snippet: Filtered reads were aligned to the Gallus gallus 6.0 reference genome using HISAT2 v2.1.0 [ ].

Article Title: COL1A1 promotes cell proliferation, cell cycle progression, and anoikis resistance in granulosa cells of chicken pre-ovulatory follicles.
Article Snippet: Chicken follicular granulosa cells (GCs) are the earliest differentiated follicular somatic cells, which play a crucial role throughout follicular growth and development.. The extracellular matrix (ECM) plays a key role in maintaining cell-cell interactions and communication during follicular development.. This study investigated the effects of the COL1A1 gene, a major component of ECM, on chicken pre-ovulatory follicular granulosa cells (POGCs) and the related regulatory mechanism.

Sequencing:

Article Title: Transcriptome Analysis and Sensory Evaluation of Thai Native Chicken Raised in Conventional and Free-Range Conditions
Article Snippet: .. The trimmed sequencing reads were aligned to the domestic chicken genome (Gallus gallus; GRCg7) using HISAT2, with overall read mapping over 93% for all samples (Figure 1). ..

Software:

Article Title: Estimation of genetic parameters and genome-wide association study for carcass traits in native chickens.
Article Snippet: .. Briefly, the raw reads were firstly trimmed by Fastp (v0.21) software (-q 20 -u 30 -n 5 -l 150) [23], and qualified reads were used to genome alignment (Gallus_gallus-6.0 [GCA_000002315.5]) using HISAT2 (v2.2.0) software [24] with default parameters. ..

Article Title: Comparative transcriptome analysis reveals involvement of FOXL2 in regulation of ovulation cycle in chicken
Article Snippet: .. The clean reads were aligned to the Ensembl Gallus_gallus-6.0 (GRCg6a) reference genome using HISAT2 software (http://ccb.jhu.edu/software/hisat2/index.shtml). ..



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