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3dhistech default compression  (3DHistech ltd)

 
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    Structured Review

    3DHistech ltd 3dhistech default compression
    The <t>compression</t> ratio obtained by JP2-WSI plotted against the ratio of empty slide to tissue area in the set of seventeen digitized slides. The approximately linear relation signifies JP2-WSI's sensitivity to image content – the greater the ratio of empty slide to tissue area the higher the overall compression ratio that is achieved
    3dhistech Default Compression, supplied by 3DHistech ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/qr+code+compressed+data+string+302/caseviewer+software/pmc05989536-79-1-0
    Average 90 stars, based on 1 article reviews
    3dhistech default compression - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Optimized JPEG 2000 Compression for Efficient Storage of Histopathological Whole-Slide Images"

    Article Title: Optimized JPEG 2000 Compression for Efficient Storage of Histopathological Whole-Slide Images

    Journal: Journal of Pathology Informatics

    doi: 10.4103/jpi.jpi_69_17

    The compression ratio obtained by JP2-WSI plotted against the ratio of empty slide to tissue area in the set of seventeen digitized slides. The approximately linear relation signifies JP2-WSI's sensitivity to image content – the greater the ratio of empty slide to tissue area the higher the overall compression ratio that is achieved
    Figure Legend Snippet: The compression ratio obtained by JP2-WSI plotted against the ratio of empty slide to tissue area in the set of seventeen digitized slides. The approximately linear relation signifies JP2-WSI's sensitivity to image content – the greater the ratio of empty slide to tissue area the higher the overall compression ratio that is achieved

    Techniques Used:

    Comparison of image quality between JP2-WSI (a and b), JPEG quality level 80 (c and d), and fixed 35:1 ratio JPEG 2000 compression (e and f). Digitally magnified screenshots of whole-slide images 14 (a, c, e) and 16 (b, d, f)
    Figure Legend Snippet: Comparison of image quality between JP2-WSI (a and b), JPEG quality level 80 (c and d), and fixed 35:1 ratio JPEG 2000 compression (e and f). Digitally magnified screenshots of whole-slide images 14 (a, c, e) and 16 (b, d, f)

    Techniques Used: Comparison

    Effects of image compression and whole-slide image scanning resolution on detecting Helicobacteria in a gastric biopsy. JP2-WSI (a and c) and JPEG quality level 80 (b and d) compressed images scanned at 0.31 μm/pixel (a and b) and 0.16 μm/pixel (c and d) sampling resolutions
    Figure Legend Snippet: Effects of image compression and whole-slide image scanning resolution on detecting Helicobacteria in a gastric biopsy. JP2-WSI (a and c) and JPEG quality level 80 (b and d) compressed images scanned at 0.31 μm/pixel (a and b) and 0.16 μm/pixel (c and d) sampling resolutions

    Techniques Used: Sampling


    Figure Legend Snippet: File sizes of the slides digitized with different scanner and compression method combinations

    Techniques Used:


    Figure Legend Snippet: Mean whole-slide images file sizes produced by different scanner and compression method combinations

    Techniques Used: Produced

    Related Articles

    other:

    Article Title: A high-precision hierarchical registration approach for stain- and scanner-independent colocalization on whole slide images in histopathology.
    Article Snippet: To evaluate our algorithm performance, we registered all PHH3-based annotations (created on 100 slides and digitized with the 3D Histech P1000 II) to the corresponding H&E WSIs from each scanner and assessed the structural similarity index metric (SSIM) between the H&E regions.

    Article Title: Direct effects of the small molecule PD-L1 inhibitor BMS-202 on A375 melanoma cells: Anti-tumor activity accompanied by increased mitochondrial function
    Article Snippet: Image acquisition was performed using a light microscope(PANNORAMIC SCAN; 3DHISTECH).

    Article Title: High-dose dexamethasone regulates microglial polarization via the GR/JAK1/STAT3 signaling pathway after traumatic brain injury
    Article Snippet: All counts were conducted using CaseViewer2.4 (3D Histech, Budapest, Hungary).

    Article Title: Modulation of the effects of a cholesterol-supplemented high-fat diet by aryl hydrocarbon receptor (AHR) activation and/or tryptophan reduction in male mice.
    Article Snippet: The liver slides were scanned into whole slide images (WSIs) using a Pannoramic 1000 Flash digital slide scanner (3DHISTECH, Budapest, Hungary) and the adipose tissue slides using a Pannoramic 250 Flash III scanner, both employing a × 20 objective resulting in a resolution of 0.24 μm/pixel.

    Article Title: A high-precision hierarchical registration approach for stain- and scanner-independent colocalization on whole slide images in histopathology.
    Article Snippet: For SSIM assessment, we created patches centered on the registered coordinates, rescaled them to the fit the patch dimensions of the scanner with the lowest resolution (3D Histech P150), and cropped the first and last rows and columns, accounting for uneven tile dimensions after resizing due to slight differences in resolution along the x- and y-axis in the 3D Histech P1000.

    Article Title: Overexpression of JAML in colorectal cancer cells predicts higher radiosensitivity by inactivating ATR pathway
    Article Snippet: Cell crawls were scanned using the digital pathology slide 3DHISTECH, and positive cells were recorded when there were more than 3 foci in the nucleus, and the percentage of positive cells in the total number of cells at 600x field of view was calculated.

    Software:

    Article Title: 3D-printed advanced scaffold armed with exosomes derived from human skeletal stem cell identified by single-cell RNA sequencing enhances osteochondral regeneration
    Article Snippet: .. All sections were scanned using the PhenoImager HT (Akoya Biosciences, USA) and analyzed using CaseViewer software (3DHISTECH Ltd., Hungary). ..



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