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transcript levels  (Human Protein Atlas)

 
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    Human Protein Atlas transcript levels
    Transcript Levels, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/protein+expression+levels/consensus+expression+levels+transcript/pmc12397229-358-4-8
    Average 86 stars, based on 1 article reviews
    transcript levels - by Bioz Stars, 2026-10
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    Related Articles

    RNA Expression:

    Article Title: TUBA4A: The Tale of an Unconventional Tubulin.
    Article Snippet: .. FIGURE 2 | RNA expression of TUBA4A in multiple tissues. (A) Consensus transcript expression levels of human TUBA4A across multiple tissues, as reported in the Human Protein Atlas database version 24.0 (downloaded from https:// www. prote inatl as. org/ human prote ome/ tissue/ data# conse nsus_ tissu es_ rna) (Uhlén et al. 2015), show broad expression in human tissues. (B) Single- nucleus transcriptomic expression of human TUBA4A in the brain, based on snRNA- seq data from the Human Protein Atlas database version 24.0 (downloaded from https:// www. prote inatl as. org/ human prote ome/ singl e+ cell/ singl e+ nucle i+ brain/ data# clust er_ types ) (Uhlén et al. 2015) and summarized from Siletti et al. (2023). ..

    Expressing:

    Article Title: TUBA4A: The Tale of an Unconventional Tubulin.
    Article Snippet: .. FIGURE 2 | RNA expression of TUBA4A in multiple tissues. (A) Consensus transcript expression levels of human TUBA4A across multiple tissues, as reported in the Human Protein Atlas database version 24.0 (downloaded from https:// www. prote inatl as. org/ human prote ome/ tissue/ data# conse nsus_ tissu es_ rna) (Uhlén et al. 2015), show broad expression in human tissues. (B) Single- nucleus transcriptomic expression of human TUBA4A in the brain, based on snRNA- seq data from the Human Protein Atlas database version 24.0 (downloaded from https:// www. prote inatl as. org/ human prote ome/ singl e+ cell/ singl e+ nucle i+ brain/ data# clust er_ types ) (Uhlén et al. 2015) and summarized from Siletti et al. (2023). ..

    Article Title: The human X chromosome in sexual differentiation and reproduction: is the X still “sexy”?
    Article Snippet: .. To calculate X:autosome expression ratios , we used the “consensus” transcript expression levels (“rna_tissue_consensus.tsv”), downloaded from the Human Protein Atlas webpage (version 23.0) in October 2024. ..

    Article Title: Chemoproteomic Identification of Serine Hydrolase RBBP9 as a Valacyclovir-Activating Enzyme.
    Article Snippet: .. BPHL (top) and RBBP9 (bottom) transcript levels across 55 tissue types and 6 blood cell types, taken from the Human Protein Atlas (available at http://www.proteinatlas.org).1 The y-axis shows the normalized expression levels (NX) from the combined HPA, GTEx, and FANTOM5 datasets. ..



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    apoc1 protein expression levels  (Human Protein Atlas)
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    <t>APOC1</t> deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay. Scale bar, 200 μm (J-K) Migration ability of TPC-1 cells after APOC1 knockdown treatment for 24 h as detected by a wound healing assay. (L) Colony formation assay performed on TPC-1 and B-CPAP cells after APOC1 siRNA treatment. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.
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    APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay. Scale bar, 200 μm (J-K) Migration ability of TPC-1 cells after APOC1 knockdown treatment for 24 h as detected by a wound healing assay. (L) Colony formation assay performed on TPC-1 and B-CPAP cells after APOC1 siRNA treatment. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Journal: Translational Oncology

    Article Title: Apolipoprotein C1 functions as a target of thyroid carcinoma and synergistic effects with promising candidate-cyclopamine

    doi: 10.1016/j.tranon.2025.102617

    Figure Lengend Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay. Scale bar, 200 μm (J-K) Migration ability of TPC-1 cells after APOC1 knockdown treatment for 24 h as detected by a wound healing assay. (L) Colony formation assay performed on TPC-1 and B-CPAP cells after APOC1 siRNA treatment. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Article Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay.

    Techniques: Expressing, Knockdown, CCK-8 Assay, Western Blot, EdU Assay, Migration, Wound Healing Assay, Colony Assay, Control

    Expression of APOC1 in PTC and its clinical prevalence. (A-C) Stage-plot analysis of the relationship between APOC1 expression and PTC tumor stages. (D) Age. (E) APOC1 expression in different PTC histological subtypes. (F) Neoplasm locations. (G) Primary neoplasm focus types. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Journal: Translational Oncology

    Article Title: Apolipoprotein C1 functions as a target of thyroid carcinoma and synergistic effects with promising candidate-cyclopamine

    doi: 10.1016/j.tranon.2025.102617

    Figure Lengend Snippet: Expression of APOC1 in PTC and its clinical prevalence. (A-C) Stage-plot analysis of the relationship between APOC1 expression and PTC tumor stages. (D) Age. (E) APOC1 expression in different PTC histological subtypes. (F) Neoplasm locations. (G) Primary neoplasm focus types. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Article Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay.

    Techniques: Expressing, Control

    Correlation analysis of APOC1 expressions with immune cell infiltration levels and immune checkpoints in PTC. ( A–M ) Correlation between APOC1 expression and infiltration levels of immune cells. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Journal: Translational Oncology

    Article Title: Apolipoprotein C1 functions as a target of thyroid carcinoma and synergistic effects with promising candidate-cyclopamine

    doi: 10.1016/j.tranon.2025.102617

    Figure Lengend Snippet: Correlation analysis of APOC1 expressions with immune cell infiltration levels and immune checkpoints in PTC. ( A–M ) Correlation between APOC1 expression and infiltration levels of immune cells. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Article Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay.

    Techniques: Expressing, Control

    Molecular docking visualization of APOC1 and drug candidates. ( A ) Farnesylthioacetic-acid; ( B ) Papaverine; ( C ) Hycanthone; ( D ) Indolophenanthridine; ( E ) Nicaraven; ( F ) Methylnorlichexanthone; ( G ) Fananserin, and ( H ) Cyclopamine.

    Journal: Translational Oncology

    Article Title: Apolipoprotein C1 functions as a target of thyroid carcinoma and synergistic effects with promising candidate-cyclopamine

    doi: 10.1016/j.tranon.2025.102617

    Figure Lengend Snippet: Molecular docking visualization of APOC1 and drug candidates. ( A ) Farnesylthioacetic-acid; ( B ) Papaverine; ( C ) Hycanthone; ( D ) Indolophenanthridine; ( E ) Nicaraven; ( F ) Methylnorlichexanthone; ( G ) Fananserin, and ( H ) Cyclopamine.

    Article Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay.

    Techniques:

    APOC1 deficiency enhances effects of Cyclopamine, inhibits proliferation, and promotes cell death in PTC. ( A ) Cell death after APOC1 knockdown or treatment with 10 μM Cyclopamine for 24 h as analyzed by flow cytometry. ( B ) Colony-forming potential of tumor cells in B-CPAP and TPC-1 cells with APOC1 knockdown or treatment with 10 μM Cyclopamine for 14 days. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Journal: Translational Oncology

    Article Title: Apolipoprotein C1 functions as a target of thyroid carcinoma and synergistic effects with promising candidate-cyclopamine

    doi: 10.1016/j.tranon.2025.102617

    Figure Lengend Snippet: APOC1 deficiency enhances effects of Cyclopamine, inhibits proliferation, and promotes cell death in PTC. ( A ) Cell death after APOC1 knockdown or treatment with 10 μM Cyclopamine for 24 h as analyzed by flow cytometry. ( B ) Colony-forming potential of tumor cells in B-CPAP and TPC-1 cells with APOC1 knockdown or treatment with 10 μM Cyclopamine for 14 days. * P < 0.05, ** P < 0.01, *** P < 0.001 compared to the control.

    Article Snippet: APOC1 deficiency inhibits aggressive PTC progression. (A-C) Analyses of APOC1 in PTC tissues (T) and adjacent normal tissues (N). (D) APOC1 protein expression levels in normal and tumor thyroid gland tissues obtained from the Human Protein Atlas database. (E) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by qPCR. (F) CCK8 assay of indicated knockdown APOC1 treatments in TPC-1 and B-CPAP cells. (G) Knockdown efficiencies of APOC1 siRNA into TPC-1 and B-CPAP cells as evaluated by Western blot. (H-I) TPC-1 cell proliferation after APOC1 knockdown treatments for 24 h as detected by the EdU assay.

    Techniques: Knockdown, Flow Cytometry, Control