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Bioedit Company cap3 bioedit
Cap3 Bioedit, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/program+bioedit/assembly+cap+contig+program/pmc13153098-92-6-7
Average 86 stars, based on 1 article reviews
cap3 bioedit - by Bioz Stars, 2026-09
86/100 stars

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Article Title: Out of Asia: feline stool-associated circular DNA virus (FeSCV) in Brazilian domestic cats.
Article Snippet: Bidirectional sequencing was performed by BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems), using EDTA and ethanol purification protocol, and the ABI 3500 sequencer (Applied Biosystems), following manufacturer’s recommendations. .. The reliability of resulting sequences was analyzed with Phred Electropherogram Quality Analysis software [12], checked and edited manually on MEGA X software [13], and the consensus sequences were assembled with Cap-Contig program available in Bioedit software [14]. ..

Article Title: Multigene analysis reveals ‘ Candidatus Phytoplasma asiaticum’ (16SrII-C) association with niger and sesame phyllody in Madhya Pradesh, Central India and identification of a putative vector
Article Snippet: .. Nucleotide sequences of each amplicon were assembled using the Contig Assembling Program function, trimmed to the annealing sites of the primers R16F2n/R16R2, and aligned to obtain a consensus sequence in the software BioEdit, version 7.1.3.0. ..

Amplification:

Article Title: Multigene analysis reveals ‘ Candidatus Phytoplasma asiaticum’ (16SrII-C) association with niger and sesame phyllody in Madhya Pradesh, Central India and identification of a putative vector
Article Snippet: .. Nucleotide sequences of each amplicon were assembled using the Contig Assembling Program function, trimmed to the annealing sites of the primers R16F2n/R16R2, and aligned to obtain a consensus sequence in the software BioEdit, version 7.1.3.0. ..

Sequencing:

Article Title: Multigene analysis reveals ‘ Candidatus Phytoplasma asiaticum’ (16SrII-C) association with niger and sesame phyllody in Madhya Pradesh, Central India and identification of a putative vector
Article Snippet: .. Nucleotide sequences of each amplicon were assembled using the Contig Assembling Program function, trimmed to the annealing sites of the primers R16F2n/R16R2, and aligned to obtain a consensus sequence in the software BioEdit, version 7.1.3.0. ..

Article Title: Diversity of culturable gut bacteria associated with brown planthopper, Nilaparvata lugens (Stål) and their role in imidacloprid degradation.
Article Snippet: .. The obtained sequences were quality-checked, aligned and assembled into contigs using Cap3 sequence assembly within the BioEdit software. .. Homology search of the sequences was done in the National Centre for Biotechnology Information (NCBI) GenBank nucleotide database employing BLASTn.

Article Title: Morphological and ITS-Based Molecular Characterization of Dermatophytes from Pets and In Vitro Antifungal Evaluation of Muğla Propolis.
Article Snippet: .. Raw sequence reads obtained with ITS1 and ITS4 primers were assembled into contigs using the Contig Assembly Program (CAP) algorithm implemented in BioEdit software (version 7.0.5) to generate consensus sequences. ..



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