Activity Assay:
Plasmid Preparation:
Article Title: Targeting miR-126 in inv(16) acute myeloid leukemia inhibits leukemia development and leukemia stem cell maintenance
Article Snippet: To induce miR-126 deletion and/or CM expression, Cbfb 56M/+ /miR126 flox/flox /Mx1-Cre mice and Cbfb 56M/+ /Mx1-Cre (6–8-week-old, both females and males) were injected intraperitoneally (i.p.) with polyinosinic–polycytidylic acid [poly (I:C)] (InvivoGen, tlrl-picw-250) at 14 mg/kg/dose every other day for a total of seven doses. .. 293 T cells were co-transfected with pGL3Basic-miR126-EGFL7-Promoter plasmid (Addgene, 32244) derived from pGL3.0 vector and Renilla luciferase reporter vector (phRL-TK) combined with pMIG-CM or pMIG-CBFb and pMIG-RUNX1 or empty control vector. .. After transfection (48 h), the activities of firefly and Renilla luciferases were measured sequentially from a single sample using the Dual-Luciferase® Reporter Assay System (Promega, E1910) according to the manufacturer’s protocol.
Article Title: Projection-specific intersectional optogenetics for precise excitation and inhibition in the marmoset brain.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Mouse Anti-GAD67 clone 1G10.2 EMD Millipore Corp MAB5406; RRID:AB_2278725 Rabbit Anti-Cre Recombinase Polyclonal Thermo Fisher Scientific, Invitrogen PA5-32244; RRID:AB_2549717 Rabbit Anti-mCherry Recombinant Monoclonal (HL1482) Thermo Fisher Scientific, Invitrogen MA5-47061; RRID:AB_2938133 Mouse Anti-GFP Monoclonal Rockland, Inc. 600-301-215; RRID:AB_218216 Bacterial and virus strains AAVretro-hSyn.HI.eGFP-Cre.WPRE.SV40 James M. Wilson Addgene viral prep # 105540-AAVrg AAV2/retro-pmSyn1-EBFP-Cre Hongkui Zeng 79 Addgene plasmid # 51507, packaged by Boston Children’s Hospital (BCH) Viral Core AAV2/9-CAG-ChR2-tdtomato BCH Viral Core Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-ChR2-tdtomato James M. Wilson Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-FLEx-Jaws-KGC-GFP-ER2 Edward Boyden 45 Addgene plasmid # 84445, packaged by BCH Viral Core AAV2/9-MDLX-ChR2-Fishell-3 Gordon Fishell 24 Addgene viral prep # 83898-AAV9 Deposited data Raw and analyzed electrophysiology and histological image data This paper Zenodo: 10.5281/zenodo.18643885 Experimental models: organisms/strains Mouse: C57BL/6J The Jackson Laboratory RRID:IMSR_JAX:000664 Common Marmoset N/A N/A Software and algorithms MATLAB R2022b The MathWorks, Inc. N/A FIJI 1.54h Schindelin et al. 80 https://imagej.net/software/fiji/ QuPath 5.1 Bankhead et al. 81 https://qupath.github.io/ OlyVIA 2.9 Evident Scientific https://evidentscientific.com/en/downloads Adobe Photoshop CC 2019 Adobe Inc. N/A Custom MATLAB Analysis Scripts This paper Zenodo: 10.5281/zenodo.18643885 Cell Reports Methods 6, 101368, April 20, 2026 e1 OPEN ACCESS ..
Control:
Article Title: Targeting miR-126 in inv(16) acute myeloid leukemia inhibits leukemia development and leukemia stem cell maintenance
Article Snippet: To induce miR-126 deletion and/or CM expression, Cbfb 56M/+ /miR126 flox/flox /Mx1-Cre mice and Cbfb 56M/+ /Mx1-Cre (6–8-week-old, both females and males) were injected intraperitoneally (i.p.) with polyinosinic–polycytidylic acid [poly (I:C)] (InvivoGen, tlrl-picw-250) at 14 mg/kg/dose every other day for a total of seven doses. .. 293 T cells were co-transfected with pGL3Basic-miR126-EGFL7-Promoter plasmid (Addgene, 32244) derived from pGL3.0 vector and Renilla luciferase reporter vector (phRL-TK) combined with pMIG-CM or pMIG-CBFb and pMIG-RUNX1 or empty control vector. .. After transfection (48 h), the activities of firefly and Renilla luciferases were measured sequentially from a single sample using the Dual-Luciferase® Reporter Assay System (Promega, E1910) according to the manufacturer’s protocol.
Derivative Assay:Article Title: Targeting miR-126 in inv(16) acute myeloid leukemia inhibits leukemia development and leukemia stem cell maintenance
Article Snippet: To induce miR-126 deletion and/or CM expression, Cbfb 56M/+ /miR126 flox/flox /Mx1-Cre mice and Cbfb 56M/+ /Mx1-Cre (6–8-week-old, both females and males) were injected intraperitoneally (i.p.) with polyinosinic–polycytidylic acid [poly (I:C)] (InvivoGen, tlrl-picw-250) at 14 mg/kg/dose every other day for a total of seven doses. .. 293 T cells were co-transfected with pGL3Basic-miR126-EGFL7-Promoter plasmid (Addgene, 32244) derived from pGL3.0 vector and Renilla luciferase reporter vector (phRL-TK) combined with pMIG-CM or pMIG-CBFb and pMIG-RUNX1 or empty control vector. .. After transfection (48 h), the activities of firefly and Renilla luciferases were measured sequentially from a single sample using the Dual-Luciferase® Reporter Assay System (Promega, E1910) according to the manufacturer’s protocol.
Luciferase:Article Title: Targeting miR-126 in inv(16) acute myeloid leukemia inhibits leukemia development and leukemia stem cell maintenance
Article Snippet: To induce miR-126 deletion and/or CM expression, Cbfb 56M/+ /miR126 flox/flox /Mx1-Cre mice and Cbfb 56M/+ /Mx1-Cre (6–8-week-old, both females and males) were injected intraperitoneally (i.p.) with polyinosinic–polycytidylic acid [poly (I:C)] (InvivoGen, tlrl-picw-250) at 14 mg/kg/dose every other day for a total of seven doses. .. 293 T cells were co-transfected with pGL3Basic-miR126-EGFL7-Promoter plasmid (Addgene, 32244) derived from pGL3.0 vector and Renilla luciferase reporter vector (phRL-TK) combined with pMIG-CM or pMIG-CBFb and pMIG-RUNX1 or empty control vector. .. After transfection (48 h), the activities of firefly and Renilla luciferases were measured sequentially from a single sample using the Dual-Luciferase® Reporter Assay System (Promega, E1910) according to the manufacturer’s protocol.
Recombinant:Article Title: Projection-specific intersectional optogenetics for precise excitation and inhibition in the marmoset brain.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Mouse Anti-GAD67 clone 1G10.2 EMD Millipore Corp MAB5406; RRID:AB_2278725 Rabbit Anti-Cre Recombinase Polyclonal Thermo Fisher Scientific, Invitrogen PA5-32244; RRID:AB_2549717 Rabbit Anti-mCherry Recombinant Monoclonal (HL1482) Thermo Fisher Scientific, Invitrogen MA5-47061; RRID:AB_2938133 Mouse Anti-GFP Monoclonal Rockland, Inc. 600-301-215; RRID:AB_218216 Bacterial and virus strains AAVretro-hSyn.HI.eGFP-Cre.WPRE.SV40 James M. Wilson Addgene viral prep # 105540-AAVrg AAV2/retro-pmSyn1-EBFP-Cre Hongkui Zeng 79 Addgene plasmid # 51507, packaged by Boston Children’s Hospital (BCH) Viral Core AAV2/9-CAG-ChR2-tdtomato BCH Viral Core Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-ChR2-tdtomato James M. Wilson Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-FLEx-Jaws-KGC-GFP-ER2 Edward Boyden 45 Addgene plasmid # 84445, packaged by BCH Viral Core AAV2/9-MDLX-ChR2-Fishell-3 Gordon Fishell 24 Addgene viral prep # 83898-AAV9 Deposited data Raw and analyzed electrophysiology and histological image data This paper Zenodo: 10.5281/zenodo.18643885 Experimental models: organisms/strains Mouse: C57BL/6J The Jackson Laboratory RRID:IMSR_JAX:000664 Common Marmoset N/A N/A Software and algorithms MATLAB R2022b The MathWorks, Inc. N/A FIJI 1.54h Schindelin et al. 80 https://imagej.net/software/fiji/ QuPath 5.1 Bankhead et al. 81 https://qupath.github.io/ OlyVIA 2.9 Evident Scientific https://evidentscientific.com/en/downloads Adobe Photoshop CC 2019 Adobe Inc. N/A Custom MATLAB Analysis Scripts This paper Zenodo: 10.5281/zenodo.18643885 Cell Reports Methods 6, 101368, April 20, 2026 e1 OPEN ACCESS ..
Virus:Article Title: Projection-specific intersectional optogenetics for precise excitation and inhibition in the marmoset brain.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Mouse Anti-GAD67 clone 1G10.2 EMD Millipore Corp MAB5406; RRID:AB_2278725 Rabbit Anti-Cre Recombinase Polyclonal Thermo Fisher Scientific, Invitrogen PA5-32244; RRID:AB_2549717 Rabbit Anti-mCherry Recombinant Monoclonal (HL1482) Thermo Fisher Scientific, Invitrogen MA5-47061; RRID:AB_2938133 Mouse Anti-GFP Monoclonal Rockland, Inc. 600-301-215; RRID:AB_218216 Bacterial and virus strains AAVretro-hSyn.HI.eGFP-Cre.WPRE.SV40 James M. Wilson Addgene viral prep # 105540-AAVrg AAV2/retro-pmSyn1-EBFP-Cre Hongkui Zeng 79 Addgene plasmid # 51507, packaged by Boston Children’s Hospital (BCH) Viral Core AAV2/9-CAG-ChR2-tdtomato BCH Viral Core Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-ChR2-tdtomato James M. Wilson Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-FLEx-Jaws-KGC-GFP-ER2 Edward Boyden 45 Addgene plasmid # 84445, packaged by BCH Viral Core AAV2/9-MDLX-ChR2-Fishell-3 Gordon Fishell 24 Addgene viral prep # 83898-AAV9 Deposited data Raw and analyzed electrophysiology and histological image data This paper Zenodo: 10.5281/zenodo.18643885 Experimental models: organisms/strains Mouse: C57BL/6J The Jackson Laboratory RRID:IMSR_JAX:000664 Common Marmoset N/A N/A Software and algorithms MATLAB R2022b The MathWorks, Inc. N/A FIJI 1.54h Schindelin et al. 80 https://imagej.net/software/fiji/ QuPath 5.1 Bankhead et al. 81 https://qupath.github.io/ OlyVIA 2.9 Evident Scientific https://evidentscientific.com/en/downloads Adobe Photoshop CC 2019 Adobe Inc. N/A Custom MATLAB Analysis Scripts This paper Zenodo: 10.5281/zenodo.18643885 Cell Reports Methods 6, 101368, April 20, 2026 e1 OPEN ACCESS ..
Software:Article Title: Projection-specific intersectional optogenetics for precise excitation and inhibition in the marmoset brain.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Mouse Anti-GAD67 clone 1G10.2 EMD Millipore Corp MAB5406; RRID:AB_2278725 Rabbit Anti-Cre Recombinase Polyclonal Thermo Fisher Scientific, Invitrogen PA5-32244; RRID:AB_2549717 Rabbit Anti-mCherry Recombinant Monoclonal (HL1482) Thermo Fisher Scientific, Invitrogen MA5-47061; RRID:AB_2938133 Mouse Anti-GFP Monoclonal Rockland, Inc. 600-301-215; RRID:AB_218216 Bacterial and virus strains AAVretro-hSyn.HI.eGFP-Cre.WPRE.SV40 James M. Wilson Addgene viral prep # 105540-AAVrg AAV2/retro-pmSyn1-EBFP-Cre Hongkui Zeng 79 Addgene plasmid # 51507, packaged by Boston Children’s Hospital (BCH) Viral Core AAV2/9-CAG-ChR2-tdtomato BCH Viral Core Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-ChR2-tdtomato James M. Wilson Addgene plasmid # 18917, packaged by BCH Viral Core AAV2/8-CAG-FLEx-Jaws-KGC-GFP-ER2 Edward Boyden 45 Addgene plasmid # 84445, packaged by BCH Viral Core AAV2/9-MDLX-ChR2-Fishell-3 Gordon Fishell 24 Addgene viral prep # 83898-AAV9 Deposited data Raw and analyzed electrophysiology and histological image data This paper Zenodo: 10.5281/zenodo.18643885 Experimental models: organisms/strains Mouse: C57BL/6J The Jackson Laboratory RRID:IMSR_JAX:000664 Common Marmoset N/A N/A Software and algorithms MATLAB R2022b The MathWorks, Inc. N/A FIJI 1.54h Schindelin et al. 80 https://imagej.net/software/fiji/ QuPath 5.1 Bankhead et al. 81 https://qupath.github.io/ OlyVIA 2.9 Evident Scientific https://evidentscientific.com/en/downloads Adobe Photoshop CC 2019 Adobe Inc. N/A Custom MATLAB Analysis Scripts This paper Zenodo: 10.5281/zenodo.18643885 Cell Reports Methods 6, 101368, April 20, 2026 e1 OPEN ACCESS ..
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