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saponin permeabilization buffer  (Thermo Fisher)


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    Structured Review

    Thermo Fisher saponin permeabilization buffer
    Saponin Permeabilization Buffer, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/permeabilization+buffer/Saponin/pmc13124628-73-19-22
    Average 97 stars, based on 1 article reviews
    saponin permeabilization buffer - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    Blocking Assay:

    Article Title: Cryoelectron tomography of HIV-1 cell-cell transmission conjugates reveals a secluded environment for viral assembly and transfer
    Article Snippet: .. After 3 hours, co-cultures were fixed with 4% PFA for 30 minutes at room temperature and permeabilized with saponin 0.1% (ThermoFisher, #J63209.AK) for 10 minutes, followed by a blocking step with 2% normal goat serum and 1% BSA for 15 minutes. .. The cells were incubated overnight with the broadly neutralizing anti-Env antibody 2G12 (BEI Resources, #ARP-1476) and with conjugated antibodies for detection of p24 (KC57-FITC Conjugate) (BEI Resources, #ARP-13450) and human CD4 (CD4-APC Conjugate) (Miltenyi #130-113-222) at 1:200 dilution in a solution of PBS, 0.05% saponin, 1% BSA and 2% normal goat serum.

    Article Title: Cis and trans regulatory mechanisms of extrachromosomal DNA segregation.
    Article Snippet: The following compounds were added before or during the nocodazole treatment, whose dosage and timing were indicated in the corresponding main figures: A485 (Selleck Chemicals), dBET6 (Selleck Chemicals or Cayman), AU15330 (Medchemexpress), actinomycin D (Selleck Chemicals), triptolide (Selleck Chemicals), α-amanitin (Santa Cruz Biotechnology), RNase A (New England Biolabs) and CDK9i (Medchemexpress). .. Single-cell suspensions were cross-linked with 2% formaldehyde (Sigma-Aldrich) for 10 min, quenched with glycine from respective kits for 10 min and permeabilized with 0.1% saponin (Thermo Scientific) in PBS for 10 min. After blocking with 1% FBS + 0.1% saponin for 30 min, the anti-phos-MPM2 (Sigma-Aldrich 05-368, 1:1,000) primary antibody was added to the blocking solution and incubated for 1 hr Cells were then washed 3× with PBS containing 0.1% saponin before AlexaFluor-conjugated secondary antibodies (Invitrogen) staining for 1 h. After another 3× washes, DNA was stained with 1 μg ml−1 DAPI for 5 min. .. Finally, cells were sorted using the FACSAria Fusion (BD Biosciences) for G1 (2 N DNA, p-MPM2-negative) and M phase (4 N DNA, p-MPM2-positive).

    Protease Inhibitor:

    Article Title: A role for the poly-asparagine repeat in the Plasmodium histone acetyltransferase, PfGCN5.
    Article Snippet: .. Saponin pellets were resuspended in 0.1% Igepal buffer (150mM NaCl and 50mM Tris HCl pH 7.6) containing HaltTM protease inhibitor cocktail EDTA-free (ThermoFisher, cat. number 78425), 1mM AEBSF, 50mM sodium fluoride and 1mM sodium orthovanadate. ..

    Single Cell:

    Article Title: Cis and trans regulatory mechanisms of extrachromosomal DNA segregation.
    Article Snippet: The following compounds were added before or during the nocodazole treatment, whose dosage and timing were indicated in the corresponding main figures: A485 (Selleck Chemicals), dBET6 (Selleck Chemicals or Cayman), AU15330 (Medchemexpress), actinomycin D (Selleck Chemicals), triptolide (Selleck Chemicals), α-amanitin (Santa Cruz Biotechnology), RNase A (New England Biolabs) and CDK9i (Medchemexpress). .. Single-cell suspensions were cross-linked with 2% formaldehyde (Sigma-Aldrich) for 10 min, quenched with glycine from respective kits for 10 min and permeabilized with 0.1% saponin (Thermo Scientific) in PBS for 10 min. After blocking with 1% FBS + 0.1% saponin for 30 min, the anti-phos-MPM2 (Sigma-Aldrich 05-368, 1:1,000) primary antibody was added to the blocking solution and incubated for 1 hr Cells were then washed 3× with PBS containing 0.1% saponin before AlexaFluor-conjugated secondary antibodies (Invitrogen) staining for 1 h. After another 3× washes, DNA was stained with 1 μg ml−1 DAPI for 5 min. .. Finally, cells were sorted using the FACSAria Fusion (BD Biosciences) for G1 (2 N DNA, p-MPM2-negative) and M phase (4 N DNA, p-MPM2-positive).

    Incubation:

    Article Title: Cis and trans regulatory mechanisms of extrachromosomal DNA segregation.
    Article Snippet: The following compounds were added before or during the nocodazole treatment, whose dosage and timing were indicated in the corresponding main figures: A485 (Selleck Chemicals), dBET6 (Selleck Chemicals or Cayman), AU15330 (Medchemexpress), actinomycin D (Selleck Chemicals), triptolide (Selleck Chemicals), α-amanitin (Santa Cruz Biotechnology), RNase A (New England Biolabs) and CDK9i (Medchemexpress). .. Single-cell suspensions were cross-linked with 2% formaldehyde (Sigma-Aldrich) for 10 min, quenched with glycine from respective kits for 10 min and permeabilized with 0.1% saponin (Thermo Scientific) in PBS for 10 min. After blocking with 1% FBS + 0.1% saponin for 30 min, the anti-phos-MPM2 (Sigma-Aldrich 05-368, 1:1,000) primary antibody was added to the blocking solution and incubated for 1 hr Cells were then washed 3× with PBS containing 0.1% saponin before AlexaFluor-conjugated secondary antibodies (Invitrogen) staining for 1 h. After another 3× washes, DNA was stained with 1 μg ml−1 DAPI for 5 min. .. Finally, cells were sorted using the FACSAria Fusion (BD Biosciences) for G1 (2 N DNA, p-MPM2-negative) and M phase (4 N DNA, p-MPM2-positive).

    Staining:

    Article Title: Cis and trans regulatory mechanisms of extrachromosomal DNA segregation.
    Article Snippet: The following compounds were added before or during the nocodazole treatment, whose dosage and timing were indicated in the corresponding main figures: A485 (Selleck Chemicals), dBET6 (Selleck Chemicals or Cayman), AU15330 (Medchemexpress), actinomycin D (Selleck Chemicals), triptolide (Selleck Chemicals), α-amanitin (Santa Cruz Biotechnology), RNase A (New England Biolabs) and CDK9i (Medchemexpress). .. Single-cell suspensions were cross-linked with 2% formaldehyde (Sigma-Aldrich) for 10 min, quenched with glycine from respective kits for 10 min and permeabilized with 0.1% saponin (Thermo Scientific) in PBS for 10 min. After blocking with 1% FBS + 0.1% saponin for 30 min, the anti-phos-MPM2 (Sigma-Aldrich 05-368, 1:1,000) primary antibody was added to the blocking solution and incubated for 1 hr Cells were then washed 3× with PBS containing 0.1% saponin before AlexaFluor-conjugated secondary antibodies (Invitrogen) staining for 1 h. After another 3× washes, DNA was stained with 1 μg ml−1 DAPI for 5 min. .. Finally, cells were sorted using the FACSAria Fusion (BD Biosciences) for G1 (2 N DNA, p-MPM2-negative) and M phase (4 N DNA, p-MPM2-positive).

    Immunofluorescence:

    Article Title: Anle138b ameliorates pathological phenotypes in mouse and cellular models of Huntington's disease.
    Article Snippet: .. For combined immunofluorescence, the sections were permeabilized with 100 μg/mL Saponin (Thermo Fisher Scientific), 3% BSA in PBS at RT, for 30min. ..

    Lysis:

    Article Title: Decoding skeletal diversity and complexity: A biomimetic and photochemical remodeling strategy.
    Article Snippet: .. Parasites were lysates after 72 hours of culture by adding 100 μl of lysis buffer [saponin (0.12 mg/ml), 0.12% Triton X- 100, 30 mM trisHCl, and 7.5 mM EDTA] containing 5× SYBR Green I (Invitrogen, 10,000× stock). ..

    SYBR Green Assay:

    Article Title: Decoding skeletal diversity and complexity: A biomimetic and photochemical remodeling strategy.
    Article Snippet: .. Parasites were lysates after 72 hours of culture by adding 100 μl of lysis buffer [saponin (0.12 mg/ml), 0.12% Triton X- 100, 30 mM trisHCl, and 7.5 mM EDTA] containing 5× SYBR Green I (Invitrogen, 10,000× stock). ..



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