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Bioedit Company pairwise sequence alignment
Pairwise Sequence Alignment, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pairwise+sequence+alignment/pairwise+alignment+tool/pmc11609660-164-2-7
Average 90 stars, based on 1 article reviews
pairwise sequence alignment - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Differential expression and biological activity of two piscidin paralogues and a novel splice variant in Atlantic cod (Gadus morhua L.).
Article Snippet: The piscidin (pis) family of potent antimicrobial peptides with broad-spectrum activity has an important role in innate host defence.. We have identified and characterized two pis paralogues in Atlantic cod (pis1 and pis2), as well as a novel splice variant of pis2, termed pis2-b.. Pis1 and pis2 genes have most likely originated from a recent duplication event, since they share the same four-exon structure with up to 91% identity at the intron level.

Article Title: Molecular Detection and Genetic Characterization of Ehrlichia ruminantium Harbored by Amblyomma hebraeum Ticks of Domestic Ruminants in North West Province, South Africa.
Article Snippet: Similarity matches between E. ruminantium strains in the present study were determined in a pair-wise sequence alignment using BioEdit version 7.0.9 [13].

Article Title: Expression interplay of genes coding for calcium-binding proteins and transcription factors during the osmotic phase provides insights on salt stress response mechanisms in bread wheat
Article Snippet: Polymorphisms in the contrasting genotypes were identified using the pairwise alignment tool from Bioedit version 7.2.5 (Hall et al. ).

Article Title: A Cross Sectional Sampling Reveals Novel Coronaviruses in Bat Populations of Georgia
Article Snippet: Using the pairwise alignment tool available in BioEdit [ ], we calculated both the average nucleotide identity (ANI) and the average amino acid identity (AAI) by comparing one on one sequences of the Georgian CoV clusters (separately, from both the AlphaCoV and BetaCoV alignments) with taxa of their closest subgenera, species, as well as with unidentified closest CoVs neighbors observed in the phylogenetic reconstruction.

Sequencing:

Article Title: Genome-Wide Identification of β-1,3-Glucanase Genes in Hevea brasiliensis
Article Snippet: .. The sequences in each cluster were aligned using Clustal W (Thompson et al., 1994) multiple sequence alignment and pairwise sequence alignment in BioEdit version 7.2 (Hall, 1999). ..


Article Title: Cryptosporidium species in HIV patients in Alexandria, Egypt: distribution and associated clinical findings.
Article Snippet: .. To further confirm this hypothesis, sequence pairwise alignment was performed on BioEdit (version 7.0.5.3) using the nucleotide sequence results and each of C. meleagridis and C. hominis alone. ..

Denaturing Gradient Gel Electrophoresis:

Article Title: Changes in sediment bacterial community in response to long-term nutrient enrichment in a subtropical seagrass-dominated estuary.
Article Snippet: Florida Bay exhibits a natural gradient of strong P limitation in the east which shifts to weak P or even N limitation at the western boundary.. This nutrient gradient greatly affects seagrass abundance and productivity across the bay.. We assessed the effects of N and P additions on sediment bacterial community structure in relation to the existing nutrient gradient in Florida Bay.



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