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Rocha labs optflux software interface
Optflux Software Interface, supplied by Rocha labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/optflux+software+interface/optflux/pm26878126-48-49-52
Average 90 stars, based on 1 article reviews
optflux software interface - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

Combined Bisulfite Restriction Analysis Assay:

Article Title: From genotype to phenotype: computational approaches for inferring microbial traits relevant to the food industry
Article Snippet: .. With high-throughput tools for model construction, in combination with user-friendly frameworks for modifying and analyzing the models [such as the COBRA toolbox for Matlab (Becker et al. ), the cobrapy Python package (Ebrahim et al. ), or the GUI-based OptFlux (Rocha et al. )] (Becker et al. , Ebrahim et al. ), constraint-based metabolic modeling stands as a powerful tool for predicting metabolic phenotypes from the genome of a strain, and even predicting the behavior of communities of multiple strains. ..

Article Title: Metabolic reconstruction of the human pathogen Candida auris: using a cross-species approach for drug target prediction.
Article Snippet: Candida auris is an emerging human pathogen, associated with antifungal drug resistance and hospital candidiasis outbreaks.. In this w ork, w e present iRV973, the first r econstructed Genome-scale meta bolic model (GSMM) for C. auris .. The model w as man uall y curated and experimentally validated, being able to accurately predict the specific growth rate of C. auris and the utilization of several sole carbon and nitrogen sources.

other:

Article Title: Metabolic flux balance analysis during lactate and glucose concomitant consumption in HEK293 cell cultures.
Article Snippet: At early stages of the exponential growth phase in HEK293 cell cultures, tricarboxylic acid cycle is unable to process all the amount of NADH generated in the glycolysis pathway, being lactate the main by-product.. However, HEK293 cells are also able to metabolize lactate depending on the environmental conditions.. It has recently been observed that one of the most important modes of lactate metabolization is the co-metabolism of lactate and glucose, observed even during the exponential growth phase.

Software:

Article Title: A multi-objective hybrid machine learning approach-based optimization for enhanced biomass and bioactive phycobiliproteins production in Nostoc sp. CCC-403.
Article Snippet: • A hybrid machine learning optimization for phycobiliproteins (PBPs) reported.. • Novel multi-objective based optimization for PBPs in Nostoc sp. CCC 403.. • An increase of 61.76% (340.5 μg/ml) total PBPs and 90% in dry cell biomass

Article Title: Microorganisms and methods for the production of glycolic acid and glycine via reverse glyoxylate shunt
Article Snippet: .. Simulations were carried out using the OptFlux software (Rocha L. (2010) OptFlux: an open-source software platform for in silico metabolic engineering. ..

In Silico:

Article Title: Machine learning-guided prediction of potential engineering targets for microbial production of lycopene.
Article Snippet: • MLP correctly predicted both lycopene titer and yield of the LY02 strain.. • MLP and GA predicted potential engineering target genes for lycopene

Article Title: Microorganisms and methods for the production of glycolic acid and glycine via reverse glyoxylate shunt
Article Snippet: .. Simulations were carried out using the OptFlux software (Rocha L. (2010) OptFlux: an open-source software platform for in silico metabolic engineering. ..

Gene Knockout:

Article Title: Machine learning-guided prediction of potential engineering targets for microbial production of lycopene.
Article Snippet: • MLP correctly predicted both lycopene titer and yield of the LY02 strain.. • MLP and GA predicted potential engineering target genes for lycopene

Over Expression:

Article Title: Machine learning-guided prediction of potential engineering targets for microbial production of lycopene.
Article Snippet: • MLP correctly predicted both lycopene titer and yield of the LY02 strain.. • MLP and GA predicted potential engineering target genes for lycopene



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Rocha labs optflux software interface
Optflux Software Interface, supplied by Rocha labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/optflux+software+interface/optflux/pm26878126-48-49-52
Average 90 stars, based on 1 article reviews
optflux software interface - by Bioz Stars, 2026-11
90/100 stars
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