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Mendeley Ltd nucleotide multiple sequence alignment
<t> Nucleotide </t> composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).
Nucleotide Multiple Sequence Alignment, supplied by Mendeley Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/nucleotide+multiple+sequence+alignment/sequence+alignments/pmc07694756-435-1-15
Average 90 stars, based on 1 article reviews
nucleotide multiple sequence alignment - by Bioz Stars, 2026-09
90/100 stars

Images

1) Product Images from "New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses"

Article Title: New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses

Journal: Insects

doi: 10.3390/insects11110766

 Nucleotide  composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).
Figure Legend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Techniques Used:

Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).
Figure Legend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Techniques Used:

Related Articles

Sequencing:

Article Title: Zoonotic Echinococcus granulosus sensu lato genotypes G6 and G7: new insights from the global mitogenome analysis.
Article Snippet: .. Sequence alignment file is available in the Mendeley Data repository (Mendeley Data, https://doi. org/10.17632/4cjpz79kf4.1). ..

Article Title: The human mitochondrial genome contains a second light strand promoter.
Article Snippet: Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Cell lines and cell culture conditions Human (HeLa (ATCC CCL-2), HEK293 (ATCC CRL-1573), HEK293T (ATCC CRL-3216), SH-SY5Y (CLS 300154)) and chimpanzee (WES, ECACC 91011612) cell lines were grown at 37 C with 5% (v/v) CO2 in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% foetal bovine serum (FBS) and 5% (w/v) penicillin/streptomycin.

Article Title: Co‐conserved sequence motifs are predictive of substrate specificity in a family of monotopic phosphoglycosyl transferases
Article Snippet: .. Sequence alignment, sequence tree, and hidden Markov model are available for download from Mendeley Data. ..

Article Title: A sucrose-specific receptor in Bemisia tabaci and its putative role in phloem feeding
Article Snippet: .. Phylogeny protein sequence alignment , This paper; Mendeley Data , https://doi.org/10.17632/9vmnzdww2v.1. .. Raw choice assays results , This paper; Mendeley Data , https://doi.org/10.17632/9vmnzdww2v.1.

Article Title: Evolutionary History of TOPIIA Topoisomerases in Animals.
Article Snippet: TOPIIA topoisomerases are required for the regulation of DNA topology by DNA cleavage and re-ligation and are important targets of antibiotic and anticancer agents.. Humans possess two TOPIIA paralogue genes (TOP2A and TOP2B) with high sequence and structural similarity but distinct cellular functions.. Despite their functional and clinical relevance, the evolutionary history of TOPIIA is still poorly understood.

Article Title: A quantum leap in the evolution of platyhelminths: Host-switching from turtles to hippopotamuses illustrated from a phylogenetic meta-analysis of polystomes (Monogenea, Polystomatidae).
Article Snippet: While monogenean worms are mainly parasites of the gills and skin of fish, and to a lesser extent parasites of the oral cavity, urinary bladder, and/or conjunctival sacs of amphibians and freshwater turtles, Oculotrema hippopotami Stunkard, 1924 is the single monogenean polystome reported from a mammal, the common hippopotamus (Hippopotamus amphibius Linnaeus).. Several hypotheses have been suggested in the last decade to explain the origin of this enigmatic parasite which infects the conjunctival sacs of H. amphibius.. Based on a molecular phylogeny inferred from nuclear (28S and 18S) and mitochondrial (12S and COI) sequences of O. hippopotami and chelonian polystomes, we found a sister group relationship between O. hippopotami and Apaloneotrema moleri (Du Preez & Morrison, 2012).


Northern Blot:

Article Title: The human mitochondrial genome contains a second light strand promoter.
Article Snippet: Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Cell lines and cell culture conditions Human (HeLa (ATCC CCL-2), HEK293 (ATCC CRL-1573), HEK293T (ATCC CRL-3216), SH-SY5Y (CLS 300154)) and chimpanzee (WES, ECACC 91011612) cell lines were grown at 37 C with 5% (v/v) CO2 in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% foetal bovine serum (FBS) and 5% (w/v) penicillin/streptomycin.

Mutagenesis:

Article Title: The human mitochondrial genome contains a second light strand promoter.
Article Snippet: Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Cell lines and cell culture conditions Human (HeLa (ATCC CCL-2), HEK293 (ATCC CRL-1573), HEK293T (ATCC CRL-3216), SH-SY5Y (CLS 300154)) and chimpanzee (WES, ECACC 91011612) cell lines were grown at 37 C with 5% (v/v) CO2 in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% foetal bovine serum (FBS) and 5% (w/v) penicillin/streptomycin.

Footprinting:

Article Title: The human mitochondrial genome contains a second light strand promoter.
Article Snippet: Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Expanded sequence alignments of primate mitochondrial promoter regions, as well as uncropped images of northern blots, gels used in promoter mutagenesis, and sequencing gels used in primer extension and DNase I footprinting experiments have been deposited in Mendeley Data (https://doi.org/10.17632/s5434tzz78.1) and are publicly available as of the date of publication. .. Cell lines and cell culture conditions Human (HeLa (ATCC CCL-2), HEK293 (ATCC CRL-1573), HEK293T (ATCC CRL-3216), SH-SY5Y (CLS 300154)) and chimpanzee (WES, ECACC 91011612) cell lines were grown at 37 C with 5% (v/v) CO2 in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% foetal bovine serum (FBS) and 5% (w/v) penicillin/streptomycin.

other:

Article Title: Arsenophonus symbiosis with louse flies: multiple origins, coevolutionary dynamics, and metabolic significance
Article Snippet: The alignments (in fasta format), phylogenetic trees (in newick format), and annotations of Arsenophonus genomes (in gbk format) are deposited in Mendeley Data .



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Image Search Results


Nucleotide sequence for PfKelch 13 and deduced amino acid sequences, showing the three samples that had mutations.

Journal: Data in Brief

Article Title: Data on selected antimalarial drug resistance markers in Zambia

doi: 10.1016/j.dib.2020.106650

Figure Lengend Snippet: Nucleotide sequence for PfKelch 13 and deduced amino acid sequences, showing the three samples that had mutations.

Article Snippet: Multiple nucleotide sequence alignments were analysed by MacVector (Cambridge, UK) using the 3D7 PfK13 sequence (GenBank accession no. XM001350122) as a reference to detect point mutations in the gene.

Techniques: Sequencing

 Nucleotide  composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Journal: Insects

Article Title: New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses

doi: 10.3390/insects11110766

Figure Lengend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Article Snippet: The nucleotide multiple sequence alignment used for the phylogenetic analyses are available in Mendely Dataset (Mendeley Data, V1, doi:10.17632/fn8gh9kcpc.1).

Techniques:

Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Journal: Insects

Article Title: New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses

doi: 10.3390/insects11110766

Figure Lengend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Article Snippet: The nucleotide multiple sequence alignment used for the phylogenetic analyses are available in Mendely Dataset (Mendeley Data, V1, doi:10.17632/fn8gh9kcpc.1).

Techniques:

List of  nucleotide  polymorphism in TaSSIV with their effects on codons and variation in amino acid.

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: List of nucleotide polymorphism in TaSSIV with their effects on codons and variation in amino acid.

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques: Mutagenesis

Location of single nucleotide polymorphisms (SNPs) in TaSSIV-A , TaSSIV-B and TaSSIV-D .

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: Location of single nucleotide polymorphisms (SNPs) in TaSSIV-A , TaSSIV-B and TaSSIV-D .

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques:

 Nucleotide  polymorphisms and functional marker development of TaSSIV-A and TaSSIV-B .

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: Nucleotide polymorphisms and functional marker development of TaSSIV-A and TaSSIV-B .

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques: Functional Assay, Marker