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MacVector inc multiple dna sequence alignment feature
Multiple Dna Sequence Alignment Feature, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/nucleotide+multiple+sequence+alignment/dna+sequence+analysis+software/pm22176658-364-6-11
Average 90 stars, based on 1 article reviews
multiple dna sequence alignment feature - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

Sequencing:

Article Title: Characterization of a Chitin-Binding Protein from Bacillus thuringiensis HD-1
Article Snippet: .. DNA sequence analysis was performed with MacVector 7.0. .. The recombinant plasmid carrying the bt-cbp21 was digested with EcoR1 and sub-cloned into pET32b (Novagen).

Article Title: Separate gene transfers into pre- and post-synaptic neocortical neurons connected by mGluR5-containing synapses
Article Snippet: .. For constructing two ScFv, a DNA sequence for each variable region was obtained by reverse translation with rat codon biases (MacVector). ..

Article Title: Separate gene transfers into pre- and post-synaptic neocortical neurons connected by mGluR5-containing synapses
Article Snippet: The protein sequences for both the heavy and light chains were commercially determined ( Figs. S1 and S2 ; Bioproximity). .. A DNA sequence that encodes each polypeptide was obtained by reverse translation using mouse codon biases (MacVector). .. ScFv anti-mGluR5 A mouse monoclonal anti-mGluR5 antibody was obtained from R&D Systems (RRID: AB_2295161, MAB 45141).

Article Title: The Pel and Psl polysaccharides provide Pseudomonas aeruginosa structural redundancy within the biofilm matrix.
Article Snippet: The psl promoter was amplified with pslProm F/pslProm R. Sequenc- ing was performed by GENEWIZ. .. Sequences were aligned using the multiple DNA sequence alignment feature in MacVector. ..

Article Title: Short and long-read whole genome sequencing explains most undiagnosed Autosomal Dominant Polycystic Kidney Disease
Article Snippet: .. Sanger sequence chromatograms were analysed using MacVector DNA sequence analysis software (MacVector Inc.). ..

Analysis:

Article Title: Characterization of a Chitin-Binding Protein from Bacillus thuringiensis HD-1
Article Snippet: .. DNA sequence analysis was performed with MacVector 7.0. .. The recombinant plasmid carrying the bt-cbp21 was digested with EcoR1 and sub-cloned into pET32b (Novagen).

DNA Sequencing:

Article Title: Structure of the Arabidopsis Glucan Phosphatase LIKE SEX FOUR2 Reveals a Unique Mechanism for Starch Dephosphorylation
Article Snippet: .. All DNA sequencing (ACGT) was confirmed using MacVector. .. Amino acid sequences of LSF2 orthologs were aligned with ClustalW in MacVector.

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Clone Assay:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Polymerase Chain Reaction:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Software:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Article Title: Short and long-read whole genome sequencing explains most undiagnosed Autosomal Dominant Polycystic Kidney Disease
Article Snippet: .. Sanger sequence chromatograms were analysed using MacVector DNA sequence analysis software (MacVector Inc.). ..



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Image Search Results


Nucleotide sequence for PfKelch 13 and deduced amino acid sequences, showing the three samples that had mutations.

Journal: Data in Brief

Article Title: Data on selected antimalarial drug resistance markers in Zambia

doi: 10.1016/j.dib.2020.106650

Figure Lengend Snippet: Nucleotide sequence for PfKelch 13 and deduced amino acid sequences, showing the three samples that had mutations.

Article Snippet: Multiple nucleotide sequence alignments were analysed by MacVector (Cambridge, UK) using the 3D7 PfK13 sequence (GenBank accession no. XM001350122) as a reference to detect point mutations in the gene.

Techniques: Sequencing

 Nucleotide  composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Journal: Insects

Article Title: New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses

doi: 10.3390/insects11110766

Figure Lengend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Article Snippet: The nucleotide multiple sequence alignment used for the phylogenetic analyses are available in Mendely Dataset (Mendeley Data, V1, doi:10.17632/fn8gh9kcpc.1).

Techniques:

Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Journal: Insects

Article Title: New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses

doi: 10.3390/insects11110766

Figure Lengend Snippet: Nucleotide composition of the Eriopis patagonia mitogenome. Protein-coding genes (PCGs), transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs).

Article Snippet: The nucleotide multiple sequence alignment used for the phylogenetic analyses are available in Mendely Dataset (Mendeley Data, V1, doi:10.17632/fn8gh9kcpc.1).

Techniques:

List of  nucleotide  polymorphism in TaSSIV with their effects on codons and variation in amino acid.

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: List of nucleotide polymorphism in TaSSIV with their effects on codons and variation in amino acid.

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques: Mutagenesis

Location of single nucleotide polymorphisms (SNPs) in TaSSIV-A , TaSSIV-B and TaSSIV-D .

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: Location of single nucleotide polymorphisms (SNPs) in TaSSIV-A , TaSSIV-B and TaSSIV-D .

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques:

 Nucleotide  polymorphisms and functional marker development of TaSSIV-A and TaSSIV-B .

Journal: Genes

Article Title: EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

doi: 10.3390/genes10040307

Figure Lengend Snippet: Nucleotide polymorphisms and functional marker development of TaSSIV-A and TaSSIV-B .

Article Snippet: Multiple alignment of nucleotide sequences was conducted by Bioedit 7.0.

Techniques: Functional Assay, Marker