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Biotechnology Information blast nucleotide search program
Blast Nucleotide Search Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/nucleotide+blast+program/nucleotide+blast/pm40020907-112-7-16
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blast nucleotide search program - by Bioz Stars, 2026-10
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Sequencing:

Article Title: β–Propeller Phytase Gene as Marker for the Quantification of Seed–Endophytic Bacillus Sp. S–30 during Post–Germination of Tomato
Article Snippet: Fertilization of phosphorus (P) in agricultural soils has caused widespread harm to the environment as well as incurred a significant economic burden to farmers.. Over years, plant growth–promoting bacteria (PGPB), commonly categorized as biostimulants or biofertilizers, have awakened the interest of farmers and scientists as a new approach to replace chemical fertilizers and to sustainably improve the nutrition of plants (Martínez-Viveros, 2010; Vanamala et al. 2021).. Specifically, PGPB that are capable of releasing orthophosphate (PO4) from immobilized inorganic and organic P forms have gained considerable attention in P–deficient soils and proposed as the model for sustainable agriculture (Jorquera et al. 2008a; Silva et al. 2023).

Article Title: Bacillus safensis NI2B displays strong antagonistic activities against rice blast pathogen Pyricularia oryzae through the production of volatile compounds
Article Snippet: .. The sequence was compared with other known sequences in the NCBI for Biotechnology Information database using a nucleotide BLAST search. ..

Article Title: Inwardly rectifying potassium channels: Critical insights for insect species and Apis mellifera
Article Snippet: .. Sequence alignment of pore and salt-bridge regions in Kir channels across species. sequence alignment of Kir channels from various species including Homo sapiens , Mus musculus , Burkholderia (bacteria), apis mellifera (honeybee), Drosophila melanogaster (fruit fly) and Aedes Aegypti (mosquito), performed using nucleotide BLAST from the National center for biotechnology information (NCBI). (a) Kir1.1 ROMK channels from each species, with the corresponding NCBI GenBank accession IDs. (b) sequence alignment highlighting the Kir channel-specific and amino acid described as responsible for the PIP2 binding-pocket structure (Hansen et al., 2012). ..

Comparison:

Article Title: β–Propeller Phytase Gene as Marker for the Quantification of Seed–Endophytic Bacillus Sp. S–30 during Post–Germination of Tomato
Article Snippet: Fertilization of phosphorus (P) in agricultural soils has caused widespread harm to the environment as well as incurred a significant economic burden to farmers.. Over years, plant growth–promoting bacteria (PGPB), commonly categorized as biostimulants or biofertilizers, have awakened the interest of farmers and scientists as a new approach to replace chemical fertilizers and to sustainably improve the nutrition of plants (Martínez-Viveros, 2010; Vanamala et al. 2021).. Specifically, PGPB that are capable of releasing orthophosphate (PO4) from immobilized inorganic and organic P forms have gained considerable attention in P–deficient soils and proposed as the model for sustainable agriculture (Jorquera et al. 2008a; Silva et al. 2023).

Bacteria:

Article Title: Inwardly rectifying potassium channels: Critical insights for insect species and Apis mellifera
Article Snippet: .. Sequence alignment of pore and salt-bridge regions in Kir channels across species. sequence alignment of Kir channels from various species including Homo sapiens , Mus musculus , Burkholderia (bacteria), apis mellifera (honeybee), Drosophila melanogaster (fruit fly) and Aedes Aegypti (mosquito), performed using nucleotide BLAST from the National center for biotechnology information (NCBI). (a) Kir1.1 ROMK channels from each species, with the corresponding NCBI GenBank accession IDs. (b) sequence alignment highlighting the Kir channel-specific and amino acid described as responsible for the PIP2 binding-pocket structure (Hansen et al., 2012). ..

Binding Assay:

Article Title: Inwardly rectifying potassium channels: Critical insights for insect species and Apis mellifera
Article Snippet: .. Sequence alignment of pore and salt-bridge regions in Kir channels across species. sequence alignment of Kir channels from various species including Homo sapiens , Mus musculus , Burkholderia (bacteria), apis mellifera (honeybee), Drosophila melanogaster (fruit fly) and Aedes Aegypti (mosquito), performed using nucleotide BLAST from the National center for biotechnology information (NCBI). (a) Kir1.1 ROMK channels from each species, with the corresponding NCBI GenBank accession IDs. (b) sequence alignment highlighting the Kir channel-specific and amino acid described as responsible for the PIP2 binding-pocket structure (Hansen et al., 2012). ..

other:

Article Title: Effect of laparoscopic niche resection on vaginal microbiota and its relation to pregnancy rate.
Article Snippet: Because the Silva v138 reference database does not include Lactobacillus crispatus, one of the most abundant vaginal species, all Lactobacillus sequences without species assignment were further refined using the Nucleotide BLAST (BLASTn) function on the National Center for Biotechnology Information NCBI website.

Article Title: DNA reveal new invasive species of tiger shrimp Penaeus monodon (Penaeidae) along the world's largest mangrove region in the Brazilian Blue Amazon.
Article Snippet: Each haplotype was compared separately to the following public databases: GenBank (National Center for Biotechnology Information—http://www.ncbi.nlm.nih.gov) using BLAST (Basic Local Alignment Search Tool) in the Nucleotide BLAST (BLAST-N) window, and BOLD (Barcoding of Life Database— h t t p : / / w w w . b a r c o d i n g l i f e . o r g ) system40.



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