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counterstaining with dapi  (Santa Cruz Biotechnology)


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    Structured Review

    Santa Cruz Biotechnology counterstaining with dapi
    Counterstaining With Dapi, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 96/100, based on 1454 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/nuclear+marker+dapi/DAPI/us11957399-348-44-27
    Average 96 stars, based on 1454 article reviews
    counterstaining with dapi - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    Staining:

    Article Title: Exposure of Human Corneal Epithelial Cells to Microplastic Particles Induces a Phase-Specific Cytokine Response.
    Article Snippet: 37 Microplastics have been identified in ophthalmic therapeutics and linked to dry eye 38 disease and meibomian gland dysfunction.. Inflammation is hypothesised to drive 39 ocular surface damage.. This in-vitro study investigates how varying concentrations of 40 microplastics affect corneal cell viability and cytokine expression.

    Article Title: Macrophage-derived IL-6 reprograms lipid metabolism to promote colorectal cancer development through USP14-mediated FASN deubiquitination
    Article Snippet: For immunohistochemistry, the slices were incubated with antibodies against IL-6 (Cat#AF-206-NA, R&D Systems, Minneapolis, Minnesota, USA), p-STAT3 (Cell Signaling Technology, Danvers, Massachusetts, USA), USP14 (Proteintech, Wuhan, Hubei, China) and FASN (Cat#10624-2-AP, Proteintech) and then treated with an HRP-labeled secondary antibody (Proteintech). .. After the final round of staining, DAPI (Cat#sc-3598, Santa Cruz Biotechnology, Texas, USA) solution was added. .. Photomicrographs were obtained via a light microscope (Leica, Germany).

    Article Title: Bispecific T cell engagers for treatment-refractory autoimmune connective tissue diseases.
    Article Snippet: Immunofluorescence stainings of muscle cryosections were performed with anti-CD19 (302202, 1:50; BioLegend) antibodies. .. Nuclei were stained with DAPI (sc-3598, 1:800; Santa Cruz Biotechnology). .. Stainings of skin paraffin sections were performed with the anti-BCMA (ab5972, 1:400; Abcam) antibody.

    Article Title: Glycine receptors in circulating white blood cells regulated by neuroinflammation
    Article Snippet: After incubation, the slides were washed three times with PBS for 5 minutes each, then incubated with appropriate secondary antibodies, i.e., Alexa Fluor 488 (1:200) and/or 594 (1:200) (Thermo-Fisher Scientific) for 1 hour at room temperature. .. A DAPI mounting agent (# AB104139 , Santa Cruz Biotechnology) was used for nuclear staining and mounting. ..

    Fluorescence:

    Article Title: Exposure of Human Corneal Epithelial Cells to Microplastic Particles Induces a Phase-Specific Cytokine Response.
    Article Snippet: 37 Microplastics have been identified in ophthalmic therapeutics and linked to dry eye 38 disease and meibomian gland dysfunction.. Inflammation is hypothesised to drive 39 ocular surface damage.. This in-vitro study investigates how varying concentrations of 40 microplastics affect corneal cell viability and cytokine expression.

    Microscopy:

    Article Title: Exposure of Human Corneal Epithelial Cells to Microplastic Particles Induces a Phase-Specific Cytokine Response.
    Article Snippet: 37 Microplastics have been identified in ophthalmic therapeutics and linked to dry eye 38 disease and meibomian gland dysfunction.. Inflammation is hypothesised to drive 39 ocular surface damage.. This in-vitro study investigates how varying concentrations of 40 microplastics affect corneal cell viability and cytokine expression.

    Incubation:

    Article Title: Submedius thalamic inputs shape the presynaptic architecture of layer 5 orbitofrontal cortex in mice
    Article Snippet: For quantitative analysis of trans-synaptic tracing, 40-μm coronal sections of the whole brain were collected using cryostat (model #CM1860; Leica). .. Free-floating slices were incubated at room temperature with gentle agitation as follows: 2 h in blocking solution (5% heat-inactivated goat serum, 0.4% Triton X-100 in PBS); overnight in primary antibody diluted 1:1000 in blocking solution (mouse anti-GFP, GFP-1010, Aves Labs; or anti-RFP, 5f8, Chromotek); 2–3 h in secondary antibody diluted 1:500 (donkey anti-chicken-IgY Alexa488 or goat anti-rat IgG Cy3, Jackson ImmunoResearch); and 15 min in 2.5 μg/mL of DAPI (Santa Cruz, Cat #sc-3598) in PBS. .. Sections were mounted on slides and cover-slipped with mounting medium (Fluoromount; Diagnostic BioSystems).

    Gentle:

    Article Title: Submedius thalamic inputs shape the presynaptic architecture of layer 5 orbitofrontal cortex in mice
    Article Snippet: For quantitative analysis of trans-synaptic tracing, 40-μm coronal sections of the whole brain were collected using cryostat (model #CM1860; Leica). .. Free-floating slices were incubated at room temperature with gentle agitation as follows: 2 h in blocking solution (5% heat-inactivated goat serum, 0.4% Triton X-100 in PBS); overnight in primary antibody diluted 1:1000 in blocking solution (mouse anti-GFP, GFP-1010, Aves Labs; or anti-RFP, 5f8, Chromotek); 2–3 h in secondary antibody diluted 1:500 (donkey anti-chicken-IgY Alexa488 or goat anti-rat IgG Cy3, Jackson ImmunoResearch); and 15 min in 2.5 μg/mL of DAPI (Santa Cruz, Cat #sc-3598) in PBS. .. Sections were mounted on slides and cover-slipped with mounting medium (Fluoromount; Diagnostic BioSystems).

    Blocking Assay:

    Article Title: Submedius thalamic inputs shape the presynaptic architecture of layer 5 orbitofrontal cortex in mice
    Article Snippet: For quantitative analysis of trans-synaptic tracing, 40-μm coronal sections of the whole brain were collected using cryostat (model #CM1860; Leica). .. Free-floating slices were incubated at room temperature with gentle agitation as follows: 2 h in blocking solution (5% heat-inactivated goat serum, 0.4% Triton X-100 in PBS); overnight in primary antibody diluted 1:1000 in blocking solution (mouse anti-GFP, GFP-1010, Aves Labs; or anti-RFP, 5f8, Chromotek); 2–3 h in secondary antibody diluted 1:500 (donkey anti-chicken-IgY Alexa488 or goat anti-rat IgG Cy3, Jackson ImmunoResearch); and 15 min in 2.5 μg/mL of DAPI (Santa Cruz, Cat #sc-3598) in PBS. .. Sections were mounted on slides and cover-slipped with mounting medium (Fluoromount; Diagnostic BioSystems).

    FACS:

    Article Title: Combination therapy with targeted 4-1BB (CD137) agonists/anti-FAP binding domain and anti-CEA/anti-CD3 bispecific antibody
    Article Snippet: Cells were surface-stained with fluorescent dye-conjugated antibodies anti-human CD4 (clone RPA-T4, BioLegend, Cat.-No. 300532), CD8 (clone RPa-T8, BioLegend, Cat.-No. 3010441), CD62L (clone DREG-56, BioLegend, Cat.-No. 304834), CD127 (clone 019D5, BioLegend, Cat.-No. A019D5), CD134 (clone Ber-ACT35, BioLegend, Cat.-No. 350008), CD137 (clone 4B4-1, BioLegend, Cat.-No. 309814), GITR (clone 621, BioLegend, Cat.-No. 3311608) and CD25 (clone M-A251, BioLegend, Cat.-No. 356112) for 20 min at 4° C. in FACS buffer. .. Then, they were washed once with FACS buffer before being resuspended in 85 μL/well FACS buffer containing containing 0.2 μg/mL DAPI (Santa Cruz Biotec, Cat. No. Sc-3598) before they were acquired the same day using 5-laser LSR-Fortessa (BD Bioscience with DIVA software). ..

    Software:

    Article Title: Combination therapy with targeted 4-1BB (CD137) agonists/anti-FAP binding domain and anti-CEA/anti-CD3 bispecific antibody
    Article Snippet: Cells were surface-stained with fluorescent dye-conjugated antibodies anti-human CD4 (clone RPA-T4, BioLegend, Cat.-No. 300532), CD8 (clone RPa-T8, BioLegend, Cat.-No. 3010441), CD62L (clone DREG-56, BioLegend, Cat.-No. 304834), CD127 (clone 019D5, BioLegend, Cat.-No. A019D5), CD134 (clone Ber-ACT35, BioLegend, Cat.-No. 350008), CD137 (clone 4B4-1, BioLegend, Cat.-No. 309814), GITR (clone 621, BioLegend, Cat.-No. 3311608) and CD25 (clone M-A251, BioLegend, Cat.-No. 356112) for 20 min at 4° C. in FACS buffer. .. Then, they were washed once with FACS buffer before being resuspended in 85 μL/well FACS buffer containing containing 0.2 μg/mL DAPI (Santa Cruz Biotec, Cat. No. Sc-3598) before they were acquired the same day using 5-laser LSR-Fortessa (BD Bioscience with DIVA software). ..



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    Expression of key genes at mRNA and protein levels in the hippocampus of TLE animal model. (A) Construction of the TLE mouse model. It primarily illustrates the process of animal anesthesia and fixation, kainic acid injection localization, brain tissue separation on ice, and hippocampus extraction. (B) Expression levels of core genes' corresponding mRNA in the hippocampus of NC and TLE groups identified by qPCR. Data are shown as mean ± SE. (C) Western blot analysis of hippocampal lysates displaying the protein levels of Dnmt1, Cdc25b, Ssh2, Fgd3, Gzma, Raf1, and Mx1 with Actin serving as a loading control. <t>Approximate</t> <t>molecular</t> weights are indicated. (D) Quantification of Western blot analysis of the protein bands in Figure C, through relative gray values compared across NC and TLE hippocampus samples. (E) Quantitative analyses of immunofluorescence staining showing the fluorescence intensity between NC and TLE in Figure F. (F) Representative immunofluorescence images showing the hippocampal localization of Cdc25b, Raf1, Fgd3, Dnmt1, Mx1, and Ssh2 (red) with <t>DAPI</t> staining the nuclei (blue) in NC and TLE groups (Scale bar, 100 μm). (TLE, temporal lobe epilepsy; NC, normal control. * p < 0.05, ** p < 0.01, *** p < 0.001, ns, not significant.)
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    Image Search Results


    Expression of key genes at mRNA and protein levels in the hippocampus of TLE animal model. (A) Construction of the TLE mouse model. It primarily illustrates the process of animal anesthesia and fixation, kainic acid injection localization, brain tissue separation on ice, and hippocampus extraction. (B) Expression levels of core genes' corresponding mRNA in the hippocampus of NC and TLE groups identified by qPCR. Data are shown as mean ± SE. (C) Western blot analysis of hippocampal lysates displaying the protein levels of Dnmt1, Cdc25b, Ssh2, Fgd3, Gzma, Raf1, and Mx1 with Actin serving as a loading control. Approximate molecular weights are indicated. (D) Quantification of Western blot analysis of the protein bands in Figure C, through relative gray values compared across NC and TLE hippocampus samples. (E) Quantitative analyses of immunofluorescence staining showing the fluorescence intensity between NC and TLE in Figure F. (F) Representative immunofluorescence images showing the hippocampal localization of Cdc25b, Raf1, Fgd3, Dnmt1, Mx1, and Ssh2 (red) with DAPI staining the nuclei (blue) in NC and TLE groups (Scale bar, 100 μm). (TLE, temporal lobe epilepsy; NC, normal control. * p < 0.05, ** p < 0.01, *** p < 0.001, ns, not significant.)

    Journal: CNS Neuroscience & Therapeutics

    Article Title: Integrated Mendelian Randomization and Single‐Cell Transcriptomics Analysis Identifies Critical Blood Biomarkers and Potential Mechanisms in Epilepsy

    doi: 10.1111/cns.70172

    Figure Lengend Snippet: Expression of key genes at mRNA and protein levels in the hippocampus of TLE animal model. (A) Construction of the TLE mouse model. It primarily illustrates the process of animal anesthesia and fixation, kainic acid injection localization, brain tissue separation on ice, and hippocampus extraction. (B) Expression levels of core genes' corresponding mRNA in the hippocampus of NC and TLE groups identified by qPCR. Data are shown as mean ± SE. (C) Western blot analysis of hippocampal lysates displaying the protein levels of Dnmt1, Cdc25b, Ssh2, Fgd3, Gzma, Raf1, and Mx1 with Actin serving as a loading control. Approximate molecular weights are indicated. (D) Quantification of Western blot analysis of the protein bands in Figure C, through relative gray values compared across NC and TLE hippocampus samples. (E) Quantitative analyses of immunofluorescence staining showing the fluorescence intensity between NC and TLE in Figure F. (F) Representative immunofluorescence images showing the hippocampal localization of Cdc25b, Raf1, Fgd3, Dnmt1, Mx1, and Ssh2 (red) with DAPI staining the nuclei (blue) in NC and TLE groups (Scale bar, 100 μm). (TLE, temporal lobe epilepsy; NC, normal control. * p < 0.05, ** p < 0.01, *** p < 0.001, ns, not significant.)

    Article Snippet: Subsequently, slices were briefly rinsed in PBS for 5 min and stained with the DAPI nuclear marker (# D1306, 1:10000, Molecular Probes) for 5 min. After a final PBS rinse, slices were mounted on gel‐coated slides, cover‐slipped with Prolong gold anti‐fade (# P36930, Vector Laboratories), and stored at 4°C until further analysis.

    Techniques: Expressing, Animal Model, Injection, Extraction, Western Blot, Control, Immunofluorescence, Staining, Fluorescence