Knockdown:
Cell Isolation:
Article Title: LC3-associated phagocytosis is impaired in monocyte-derived macrophages from systemic sclerosis patients
Article Snippet: Accutase , – , Gibco, A1110501. .. Pan T cell Isolation Kit, human , – , Miltenyi Biotec, 130-096-535. .. CD14 MicroBeads, human , 20 μL/10 7 cells , Miltenyi Biotec, 130-050-201.
Article Title: Single-allele nanoscale mapping of regulatory variants
Article Snippet: .. The peripheral blood mononuclear cell layer was isolated and CD4 + or CD3 + pan-T cells were enriched with CD4 + magnetic beads (Miltenyi, cat. no. 130-045-101) or pan-T cell isolation kit (Miltenyi, cat. no. 130-096-535), respectively, as per the manufacturer’s instructions. .. CD4 + or CD3 + cells were cultured at 1 × 10 6 cells ml −1 in Immunocult-XF T cell expansion medium (STEMCELL Technologies, cat. no. 10981) supplemented with 25 μl ml −1 of Immunocult Human CD3, CD28, CD2 T cell activator (STEMCELL Technologies, cat. no. 100-0785) and 10 ng ml −1 of human interleukin-2 (Invitrogen), for 60 h, before collection.
Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Article Title: Method for transduction of t cells in the presence of malignant cells
Article Snippet: .. Primary T cells of 2 donors were isolated from PBMC using the PAN T cell isolation Kit (Miltenyi Biotec, 130-096-535) and cultivated in TexMACS medium (Miltenyi Biotec, 130-097-196) with IL7 (Miltenyi Biotec, 170-076-111) IL15 (Miltenyi Biotec, 170-076-114) and Transact (Miltenyi Biotec, 130-111-160) over night at 37° C. Half of the samples were treated with the integration inhibitor Raltegravir (Sigma Aldrich, cat. No. CDS023737-25MG). ..
Isolation:Article Title: Single-allele nanoscale mapping of regulatory variants
Article Snippet: .. The peripheral blood mononuclear cell layer was isolated and CD4 + or CD3 + pan-T cells were enriched with CD4 + magnetic beads (Miltenyi, cat. no. 130-045-101) or pan-T cell isolation kit (Miltenyi, cat. no. 130-096-535), respectively, as per the manufacturer’s instructions. .. CD4 + or CD3 + cells were cultured at 1 × 10 6 cells ml −1 in Immunocult-XF T cell expansion medium (STEMCELL Technologies, cat. no. 10981) supplemented with 25 μl ml −1 of Immunocult Human CD3, CD28, CD2 T cell activator (STEMCELL Technologies, cat. no. 100-0785) and 10 ng ml −1 of human interleukin-2 (Invitrogen), for 60 h, before collection.
Article Title: Method for transduction of t cells in the presence of malignant cells
Article Snippet: .. Primary T cells of 2 donors were isolated from PBMC using the PAN T cell isolation Kit (Miltenyi Biotec, 130-096-535) and cultivated in TexMACS medium (Miltenyi Biotec, 130-097-196) with IL7 (Miltenyi Biotec, 170-076-111) IL15 (Miltenyi Biotec, 170-076-114) and Transact (Miltenyi Biotec, 130-111-160) over night at 37° C. Half of the samples were treated with the integration inhibitor Raltegravir (Sigma Aldrich, cat. No. CDS023737-25MG). ..
Magnetic Beads:Article Title: Single-allele nanoscale mapping of regulatory variants
Article Snippet: .. The peripheral blood mononuclear cell layer was isolated and CD4 + or CD3 + pan-T cells were enriched with CD4 + magnetic beads (Miltenyi, cat. no. 130-045-101) or pan-T cell isolation kit (Miltenyi, cat. no. 130-096-535), respectively, as per the manufacturer’s instructions. .. CD4 + or CD3 + cells were cultured at 1 × 10 6 cells ml −1 in Immunocult-XF T cell expansion medium (STEMCELL Technologies, cat. no. 10981) supplemented with 25 μl ml −1 of Immunocult Human CD3, CD28, CD2 T cell activator (STEMCELL Technologies, cat. no. 100-0785) and 10 ng ml −1 of human interleukin-2 (Invitrogen), for 60 h, before collection.
Recombinant:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Functional Assay:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Glo Assay:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Formulation:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Concentration Assay:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
Transferring:Article Title: Solid forms of pharmaceutically acceptable salts of (S)-(2-ethyl-5-fluoro-4-hydroxyphenyl)-1H-indazol-3-yl)-4,6-dihydropyrrolo[3,4-d]imidazol-5(1H)-yl)(3-hydroxypyrrolidin-1-yl)methanone as JAK inhibitors
Article Snippet: .. Experimental Scheme 2.1 Experimental Materials and Instruments Item Name Source/Supplier Catalogue No. 1 Human PBMC Cryopreserved TPCS PB050C 2 RPMI Medium 1640 Invitrogen A10491-01 3 Fetal bovine serum Invitrogen 10099-141 4 Penicillin-streptomycin Invitrogen 15140-122 5 DMSO MP 196055 6 Pan T Cell Isolation Kit, human Miltenyi Biotech 130-096-535 7 Recombinant Human IL-2 Protein R&D 202-IL-010 8 anti-CD3 human OKT3 eBioscience EB16-0037-85 9 CD28 Monoclonal Antibody eBioscience 16-0289-85 (CD28.2), Functional Grade 10 Tofacitinib Selleck S2789 11 Celltiter Glo assay kit Promega G7573 12 384 well plate Corning 3764 13 6 well plate Corning 3516 15 Plate Reader PerkinElmer Envision 2104 16 Centrifuge Eppendorf 5810R 17 Echo 550 PerkinElmer 6008280 2.2 Experimental Methods 2.2.1 Formulation of the Compound Stocks to be Tested Formulation of compound stocks Weighing Volume DMSO stock Molecular mass of DMSO concentration Compound weight (mg) added (μL) (mM) Tofacitinib 312.37 5.00 1600.70 10 Compound of 476.51 1.7 342.49 10 formula (I) 2.2.2 Experimental Steps of Kinase Reaction a) Isolating T cells from human PBMC using the Human Pan T Cell Isolation Kit according to the manual. b) Stimulating the T cells with anti-CD3 antibody and anti-CD28 antibody and incubating them for 72 h at 37° C. in a 5% CO2 incubator. c) Collecting T cells and washing the cells with PBS. d) Transferring 40 nL of the diluted compound solution to be tested to a 384-well plate using Echo 550. e) Inoculating the T cells (prepared in step c) into the 384-well reaction plate (prepared in step d) in an amount of 35 μL/well, centrifuging at 1000 rpm for 1 min, and incubating at 37° C. with 5% CO2. f) Adding 5 μL/well of human recombinant IL-2 protein at a final concentration of 10 ng/ml, then centrifuging at 1000 rpm for 1 min, and incubating for 72 h at 37° C. with 5% CO2. g) Adding 20 μL Celltiter Glo buffer per well, centrifuging at 1000 rpm for 1 min, mixing at 350 g for 2 min, and incubating at room temperature for 30 min. h) Reading the lumilencence signal values on the EnVision multifunctional plate reader. ..
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