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genechip mouse promoter 1.0r arrays  (Thermo Fisher)


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    Thermo Fisher genechip mouse promoter 1.0r arrays
    Genechip Mouse Promoter 1.0r Arrays, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mouse+promoter+array/pmc03538684-56-6--1
    Average 90 stars, based on 1 article reviews
    genechip mouse promoter 1.0r arrays - by Bioz Stars, 2026-11
    90/100 stars

    Images

    Related Articles

    Microarray:

    Article Title: Ring1b bookmarks genes in pancreatic embryonic progenitors for repression in adult ? cells
    Article Snippet: We fragmented 6–7.5 μg of DNA, labeled it using the Affymetrix GeneChip WT Double-Stranded DNA Terminal Labeling kit, and hybridized it to GeneChip Mouse Promoter 1.0R arrays.

    Article Title: An extended transcriptional network for pluripotency of embryonic stem cells
    Article Snippet: Microarray and data processing At least three biological replicates of hybridization were performed on Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Prox1 maintains muscle structure and growth in the developing heart
    Article Snippet: Amplified DNA (7.5 μg) was fragmented and end labelled using the GeneChip WT Double-Stranded DNA Terminal Labelling Kit, hybridised to GeneChip Mouse Promoter 1.0R Arrays, and then stained using the GeneChip Hybridisation, Wash and Stain Kit (all Affymetrix).

    Article Title: Enrichment of short interspersed transposable elements to embryonic stem cell-specific hypomethylated gene regions.
    Article Snippet: Amplified DNA was labeled and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
    Article Snippet: DNA samples were labeled using the GeneChip WT Double-Stranded DNA Terminal Labeling Kit (Affymetrix) and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: Differential Transcriptional Regulation of meis1 by Gfi1b and Its Co-Factors LSD1 and CoREST
    Article Snippet: Hybridization was performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1.
    Article Snippet: Three replicates of hybridization were performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Hybridization:

    Article Title: Ring1b bookmarks genes in pancreatic embryonic progenitors for repression in adult ? cells
    Article Snippet: We fragmented 6–7.5 μg of DNA, labeled it using the Affymetrix GeneChip WT Double-Stranded DNA Terminal Labeling kit, and hybridized it to GeneChip Mouse Promoter 1.0R arrays.

    Article Title: An extended transcriptional network for pluripotency of embryonic stem cells
    Article Snippet: Microarray and data processing At least three biological replicates of hybridization were performed on Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Prox1 maintains muscle structure and growth in the developing heart
    Article Snippet: Amplified DNA (7.5 μg) was fragmented and end labelled using the GeneChip WT Double-Stranded DNA Terminal Labelling Kit, hybridised to GeneChip Mouse Promoter 1.0R Arrays, and then stained using the GeneChip Hybridisation, Wash and Stain Kit (all Affymetrix).

    Article Title: Enrichment of short interspersed transposable elements to embryonic stem cell-specific hypomethylated gene regions.
    Article Snippet: Amplified DNA was labeled and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
    Article Snippet: DNA samples were labeled using the GeneChip WT Double-Stranded DNA Terminal Labeling Kit (Affymetrix) and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: Differential Transcriptional Regulation of meis1 by Gfi1b and Its Co-Factors LSD1 and CoREST
    Article Snippet: Hybridization was performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1.
    Article Snippet: Three replicates of hybridization were performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Amplification:

    Article Title: Ring1b bookmarks genes in pancreatic embryonic progenitors for repression in adult ? cells
    Article Snippet: We fragmented 6–7.5 μg of DNA, labeled it using the Affymetrix GeneChip WT Double-Stranded DNA Terminal Labeling kit, and hybridized it to GeneChip Mouse Promoter 1.0R arrays.

    Article Title: An extended transcriptional network for pluripotency of embryonic stem cells
    Article Snippet: Microarray and data processing At least three biological replicates of hybridization were performed on Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Prox1 maintains muscle structure and growth in the developing heart
    Article Snippet: Amplified DNA (7.5 μg) was fragmented and end labelled using the GeneChip WT Double-Stranded DNA Terminal Labelling Kit, hybridised to GeneChip Mouse Promoter 1.0R Arrays, and then stained using the GeneChip Hybridisation, Wash and Stain Kit (all Affymetrix).

    Article Title: Enrichment of short interspersed transposable elements to embryonic stem cell-specific hypomethylated gene regions.
    Article Snippet: Amplified DNA was labeled and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
    Article Snippet: DNA samples were labeled using the GeneChip WT Double-Stranded DNA Terminal Labeling Kit (Affymetrix) and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: Differential Transcriptional Regulation of meis1 by Gfi1b and Its Co-Factors LSD1 and CoREST
    Article Snippet: Hybridization was performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1.
    Article Snippet: Three replicates of hybridization were performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Labeling:

    Article Title: Ring1b bookmarks genes in pancreatic embryonic progenitors for repression in adult ? cells
    Article Snippet: We fragmented 6–7.5 μg of DNA, labeled it using the Affymetrix GeneChip WT Double-Stranded DNA Terminal Labeling kit, and hybridized it to GeneChip Mouse Promoter 1.0R arrays.

    Article Title: An extended transcriptional network for pluripotency of embryonic stem cells
    Article Snippet: Microarray and data processing At least three biological replicates of hybridization were performed on Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Prox1 maintains muscle structure and growth in the developing heart
    Article Snippet: Amplified DNA (7.5 μg) was fragmented and end labelled using the GeneChip WT Double-Stranded DNA Terminal Labelling Kit, hybridised to GeneChip Mouse Promoter 1.0R Arrays, and then stained using the GeneChip Hybridisation, Wash and Stain Kit (all Affymetrix).

    Article Title: Enrichment of short interspersed transposable elements to embryonic stem cell-specific hypomethylated gene regions.
    Article Snippet: Amplified DNA was labeled and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
    Article Snippet: DNA samples were labeled using the GeneChip WT Double-Stranded DNA Terminal Labeling Kit (Affymetrix) and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: Differential Transcriptional Regulation of meis1 by Gfi1b and Its Co-Factors LSD1 and CoREST
    Article Snippet: Hybridization was performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1.
    Article Snippet: Three replicates of hybridization were performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Staining:

    Article Title: Ring1b bookmarks genes in pancreatic embryonic progenitors for repression in adult ? cells
    Article Snippet: We fragmented 6–7.5 μg of DNA, labeled it using the Affymetrix GeneChip WT Double-Stranded DNA Terminal Labeling kit, and hybridized it to GeneChip Mouse Promoter 1.0R arrays.

    Article Title: An extended transcriptional network for pluripotency of embryonic stem cells
    Article Snippet: Microarray and data processing At least three biological replicates of hybridization were performed on Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Prox1 maintains muscle structure and growth in the developing heart
    Article Snippet: Amplified DNA (7.5 μg) was fragmented and end labelled using the GeneChip WT Double-Stranded DNA Terminal Labelling Kit, hybridised to GeneChip Mouse Promoter 1.0R Arrays, and then stained using the GeneChip Hybridisation, Wash and Stain Kit (all Affymetrix).

    Article Title: Enrichment of short interspersed transposable elements to embryonic stem cell-specific hypomethylated gene regions.
    Article Snippet: Amplified DNA was labeled and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
    Article Snippet: DNA samples were labeled using the GeneChip WT Double-Stranded DNA Terminal Labeling Kit (Affymetrix) and hybridized with Affymetrix GeneChip mouse promoter 1.0R arrays.

    Article Title: Differential Transcriptional Regulation of meis1 by Gfi1b and Its Co-Factors LSD1 and CoREST
    Article Snippet: Hybridization was performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.

    Article Title: Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1.
    Article Snippet: Three replicates of hybridization were performed on the Affymetrix GeneChip Mouse promoter 1.0R arrays.



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    Expression of DNMTs and activity of Wnt signaling pathway were increased but Notum expression was decreased in laser-induced CNV mice. ( A – D ) Representative western blot and quantitative analysis of DNMT1, DNMT3A, and DNMT3B in REP/choroidal complexes from the indicated groups ( n = 9 mice/per group for all experiments). ( E – G ) qRT-PCR was performed to detect the mRNA expression of DNMTs in the RPE/choroidal complexes from normal and laser-induced CNV mice ( n = 6 mice/per group for all experiments). ( H ) Clustering of differentially enriched peaks <t>of</t> <t>methylation</t> in the <t>DNA</t> promoter region in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( red , hypermethylation; green , hypomethylation). ( I ) Enrichment analysis of KEGG pathways and the top 10 activated pathways identified among hypermethylated differentially methylated genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group. ( J – P ) qRT-PCR was performed to detect the mRNA expression of Wnt signaling-related genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( n = 9 mice/per group for all experiments). Each experiment was repeated at least three times, and data in the graphs represent the mean ± SEM. * P < 0.05; ** P < 0.01; *** P < 0.001.
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    Expression of DNMTs and activity of Wnt signaling pathway were increased but Notum expression was decreased in laser-induced CNV mice. ( A – D ) Representative western blot and quantitative analysis of DNMT1, DNMT3A, and DNMT3B in REP/choroidal complexes from the indicated groups ( n = 9 mice/per group for all experiments). ( E – G ) qRT-PCR was performed to detect the mRNA expression of DNMTs in the RPE/choroidal complexes from normal and laser-induced CNV mice ( n = 6 mice/per group for all experiments). ( H ) Clustering of differentially enriched peaks <t>of</t> <t>methylation</t> in the <t>DNA</t> promoter region in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( red , hypermethylation; green , hypomethylation). ( I ) Enrichment analysis of KEGG pathways and the top 10 activated pathways identified among hypermethylated differentially methylated genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group. ( J – P ) qRT-PCR was performed to detect the mRNA expression of Wnt signaling-related genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( n = 9 mice/per group for all experiments). Each experiment was repeated at least three times, and data in the graphs represent the mean ± SEM. * P < 0.05; ** P < 0.01; *** P < 0.001.
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    Expression of DNMTs and activity of Wnt signaling pathway were increased but Notum expression was decreased in laser-induced CNV mice. ( A – D ) Representative western blot and quantitative analysis of DNMT1, DNMT3A, and DNMT3B in REP/choroidal complexes from the indicated groups ( n = 9 mice/per group for all experiments). ( E – G ) qRT-PCR was performed to detect the mRNA expression of DNMTs in the RPE/choroidal complexes from normal and laser-induced CNV mice ( n = 6 mice/per group for all experiments). ( H ) Clustering of differentially enriched peaks <t>of</t> <t>methylation</t> in the <t>DNA</t> promoter region in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( red , hypermethylation; green , hypomethylation). ( I ) Enrichment analysis of KEGG pathways and the top 10 activated pathways identified among hypermethylated differentially methylated genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group. ( J – P ) qRT-PCR was performed to detect the mRNA expression of Wnt signaling-related genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( n = 9 mice/per group for all experiments). Each experiment was repeated at least three times, and data in the graphs represent the mean ± SEM. * P < 0.05; ** P < 0.01; *** P < 0.001.
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    Image Search Results


    Expression of DNMTs and activity of Wnt signaling pathway were increased but Notum expression was decreased in laser-induced CNV mice. ( A – D ) Representative western blot and quantitative analysis of DNMT1, DNMT3A, and DNMT3B in REP/choroidal complexes from the indicated groups ( n = 9 mice/per group for all experiments). ( E – G ) qRT-PCR was performed to detect the mRNA expression of DNMTs in the RPE/choroidal complexes from normal and laser-induced CNV mice ( n = 6 mice/per group for all experiments). ( H ) Clustering of differentially enriched peaks of methylation in the DNA promoter region in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( red , hypermethylation; green , hypomethylation). ( I ) Enrichment analysis of KEGG pathways and the top 10 activated pathways identified among hypermethylated differentially methylated genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group. ( J – P ) qRT-PCR was performed to detect the mRNA expression of Wnt signaling-related genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( n = 9 mice/per group for all experiments). Each experiment was repeated at least three times, and data in the graphs represent the mean ± SEM. * P < 0.05; ** P < 0.01; *** P < 0.001.

    Journal: Investigative Ophthalmology & Visual Science

    Article Title: 5-Aza-2′-Deoxycytidine Ameliorates Choroidal Neovascularization by Inhibiting the Wnt/β-Catenin Signaling Pathway

    doi: 10.1167/iovs.65.2.23

    Figure Lengend Snippet: Expression of DNMTs and activity of Wnt signaling pathway were increased but Notum expression was decreased in laser-induced CNV mice. ( A – D ) Representative western blot and quantitative analysis of DNMT1, DNMT3A, and DNMT3B in REP/choroidal complexes from the indicated groups ( n = 9 mice/per group for all experiments). ( E – G ) qRT-PCR was performed to detect the mRNA expression of DNMTs in the RPE/choroidal complexes from normal and laser-induced CNV mice ( n = 6 mice/per group for all experiments). ( H ) Clustering of differentially enriched peaks of methylation in the DNA promoter region in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( red , hypermethylation; green , hypomethylation). ( I ) Enrichment analysis of KEGG pathways and the top 10 activated pathways identified among hypermethylated differentially methylated genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group. ( J – P ) qRT-PCR was performed to detect the mRNA expression of Wnt signaling-related genes in the RPE/choroidal complexes from the normal group and the laser-induced CNV group ( n = 9 mice/per group for all experiments). Each experiment was repeated at least three times, and data in the graphs represent the mean ± SEM. * P < 0.05; ** P < 0.01; *** P < 0.001.

    Article Snippet: In this study, the Arraystar Mouse DNA Promoter Array was utilized to determine methylation profiles in the whole genome in the DNA promoters of the RPE/choroidal complex in mice 7 days after laser photocoagulation because the optimum time point to assess CNV formation is typically at day 7 to day 14.

    Techniques: Expressing, Activity Assay, Western Blot, Quantitative RT-PCR, Methylation