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mouse primary visual cortex  (Spatial Transcriptomics Inc)

 
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    Spatial Transcriptomics Inc mouse primary visual cortex
    Mouse Primary Visual Cortex, supplied by Spatial Transcriptomics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mouse+primary+visual+cortex/cortex+mouse+primary+visual/pm38347138-741-0-4
    Average 86 stars, based on 1 article reviews
    mouse primary visual cortex - by Bioz Stars, 2026-10
    86/100 stars

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    Related Articles

    Spatial Transcriptomics:

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Human middle temporal gyrus: Spatial transcriptomics (ISS) at https:// github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https:// portal.brain-map.org/atlases-and-data/rnaseq/human-mtg-smart-seq. .. Mouse primary visual cortex: Spatial transcriptomics (ISS) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex. .. Drosophila embryo: Spatial transcriptomics (FISH) at https://github. com/rajewsky-lab/distmap/; RNA-seq (Drop-seq) at GSE95025 in GEO.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Raw data were accessed from existing benchmark datasets7 and are also available from the following studies: Mouse hippocampus: Spatial transcriptomics (seqFISH) at https:// content.cruk.cam.ac.uk/jmlab/SpatialMouseAtlas2020/; RNA-seq (10x Chromium) at GSE158450 in the Gene Expression Omnibus (GEO) for ‘HIPP_sc_Rep1_10X sample’. .. Mouse primary visual cortex: Spatial transcriptomics (MERFISH) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org /atlases-and-data/rnaseq / mouse-v1-and-alm-smart-seq for mouse primary visual cortex. .. Mouse prefrontal cortex: Spatial transcriptomics (STARmap) at ‘20180419_BZ9_control’ in https://www.starmapresources. com/data; RNA-seq (10x Chromium) at GSE158450 in the GEO for ‘PFC_sc_Rep2_10X’.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Mouse somatosensory cortex: Spatial transcriptomics (osmFISH) at http://linnarssonlab.org/osmFISH/ for cortical region subset; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/ rnaseq/mouse-whole-cortex-and-hippocampus-smart-seq for mouse somatosensory cortex. .. Mouse primary visual cortex: Spatial transcriptomics (ExSeq) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex. .. Mouse gastrulation: Spatial transcriptomics (seqFISH) at https://content.cruk.cam.ac.uk/jmlab/SpatialMouseAtlas2020/; RNA-seq (10x Chromium) ‘Sample 21’ in the MouseGastrulationData R package.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Drosophila embryo: Spatial transcriptomics (FISH) at https://github. com/rajewsky-lab/distmap/; RNA-seq (Drop-seq) at GSE95025 in GEO. .. Mouse somatosensory cortex: Spatial transcriptomics (osmFISH) at http://linnarssonlab.org/osmFISH/ for cortical region subset; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/ rnaseq/mouse-whole-cortex-and-hippocampus-smart-seq for mouse somatosensory cortex. .. Mouse primary visual cortex: Spatial transcriptomics (ExSeq) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex.

    RNA Sequencing:

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Human middle temporal gyrus: Spatial transcriptomics (ISS) at https:// github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https:// portal.brain-map.org/atlases-and-data/rnaseq/human-mtg-smart-seq. .. Mouse primary visual cortex: Spatial transcriptomics (ISS) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex. .. Drosophila embryo: Spatial transcriptomics (FISH) at https://github. com/rajewsky-lab/distmap/; RNA-seq (Drop-seq) at GSE95025 in GEO.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Raw data were accessed from existing benchmark datasets7 and are also available from the following studies: Mouse hippocampus: Spatial transcriptomics (seqFISH) at https:// content.cruk.cam.ac.uk/jmlab/SpatialMouseAtlas2020/; RNA-seq (10x Chromium) at GSE158450 in the Gene Expression Omnibus (GEO) for ‘HIPP_sc_Rep1_10X sample’. .. Mouse primary visual cortex: Spatial transcriptomics (MERFISH) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org /atlases-and-data/rnaseq / mouse-v1-and-alm-smart-seq for mouse primary visual cortex. .. Mouse prefrontal cortex: Spatial transcriptomics (STARmap) at ‘20180419_BZ9_control’ in https://www.starmapresources. com/data; RNA-seq (10x Chromium) at GSE158450 in the GEO for ‘PFC_sc_Rep2_10X’.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Mouse somatosensory cortex: Spatial transcriptomics (osmFISH) at http://linnarssonlab.org/osmFISH/ for cortical region subset; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/ rnaseq/mouse-whole-cortex-and-hippocampus-smart-seq for mouse somatosensory cortex. .. Mouse primary visual cortex: Spatial transcriptomics (ExSeq) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex. .. Mouse gastrulation: Spatial transcriptomics (seqFISH) at https://content.cruk.cam.ac.uk/jmlab/SpatialMouseAtlas2020/; RNA-seq (10x Chromium) ‘Sample 21’ in the MouseGastrulationData R package.

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Drosophila embryo: Spatial transcriptomics (FISH) at https://github. com/rajewsky-lab/distmap/; RNA-seq (Drop-seq) at GSE95025 in GEO. .. Mouse somatosensory cortex: Spatial transcriptomics (osmFISH) at http://linnarssonlab.org/osmFISH/ for cortical region subset; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/ rnaseq/mouse-whole-cortex-and-hippocampus-smart-seq for mouse somatosensory cortex. .. Mouse primary visual cortex: Spatial transcriptomics (ExSeq) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex.

    RNA sequencing:

    Article Title: TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses.
    Article Snippet: Drosophila embryo: Spatial transcriptomics (FISH) at https://github. com/rajewsky-lab/distmap/; RNA-seq (Drop-seq) at GSE95025 in GEO. .. Mouse somatosensory cortex: Spatial transcriptomics (osmFISH) at http://linnarssonlab.org/osmFISH/ for cortical region subset; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/ rnaseq/mouse-whole-cortex-and-hippocampus-smart-seq for mouse somatosensory cortex. .. Mouse primary visual cortex: Spatial transcriptomics (ExSeq) at https://github.com/spacetx-spacejam/data; RNA-seq (Smart-seq) at https://portal.brain-map.org/atlases-and-data/rnaseq/mouse-v1and-alm-smart-seq for mouse primary visual cortex.



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    Diverse functions of cortical feedback throughout the hierarchy. (Left) Hierarchical organization of the primate <t>visual</t> system adapted with permission from Felleman and Van Essen . Circled regions are some of the cortical regions discussed in the manuscript. (Right) Proposed functions of cortical feedback, segregated according to source and the target region. (Red) prefrontal <t>cortex</t> (PFC): Brodmann area 46, dorsolateral PFC; (green) premotor cortices: FEF, frontal eye field; DPc, dorsal premotor cortex; MPc, medial premotor cortex; M2, secondary motor cortex; (yellow) higher-order sensory cortices: IT, infratemporal cortex; V4, visual area V4; MT, middle temporal visual area; (blue) lower-order sensory cortices: V1, <t>primary</t> visual cortex; S1, primary somatosensory cortex; A1, primary auditory cortex.
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    Image Search Results


    Journal: iScience

    Article Title: Investigating microglia-neuron crosstalk by characterizing microglial contamination in human and mouse patch-seq datasets

    doi: 10.1016/j.isci.2023.107329

    Figure Lengend Snippet:

    Article Snippet: Patch-Seq of neurons in mouse primary visual cortex , Gouwens et al., , Allen Institute for Brain Science Cell Types Database.

    Techniques: Software

    Diverse functions of cortical feedback throughout the hierarchy. (Left) Hierarchical organization of the primate visual system adapted with permission from Felleman and Van Essen . Circled regions are some of the cortical regions discussed in the manuscript. (Right) Proposed functions of cortical feedback, segregated according to source and the target region. (Red) prefrontal cortex (PFC): Brodmann area 46, dorsolateral PFC; (green) premotor cortices: FEF, frontal eye field; DPc, dorsal premotor cortex; MPc, medial premotor cortex; M2, secondary motor cortex; (yellow) higher-order sensory cortices: IT, infratemporal cortex; V4, visual area V4; MT, middle temporal visual area; (blue) lower-order sensory cortices: V1, primary visual cortex; S1, primary somatosensory cortex; A1, primary auditory cortex.

    Journal: Frontiers in Systems Neuroscience

    Article Title: Shaping the Cortical Landscape: Functions and Mechanisms of Top-Down Cortical Feedback Pathways

    doi: 10.3389/fnsys.2020.00033

    Figure Lengend Snippet: Diverse functions of cortical feedback throughout the hierarchy. (Left) Hierarchical organization of the primate visual system adapted with permission from Felleman and Van Essen . Circled regions are some of the cortical regions discussed in the manuscript. (Right) Proposed functions of cortical feedback, segregated according to source and the target region. (Red) prefrontal cortex (PFC): Brodmann area 46, dorsolateral PFC; (green) premotor cortices: FEF, frontal eye field; DPc, dorsal premotor cortex; MPc, medial premotor cortex; M2, secondary motor cortex; (yellow) higher-order sensory cortices: IT, infratemporal cortex; V4, visual area V4; MT, middle temporal visual area; (blue) lower-order sensory cortices: V1, primary visual cortex; S1, primary somatosensory cortex; A1, primary auditory cortex.

    Article Snippet: Visual and locomotion signals are integrated with mouse primary visual cortex (V1; i.e., Niell and Stryker, ; Keller et al., ; Saleem et al., ; Pakan et al., ).

    Techniques: