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python package mne-python  (RStudio)

 
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    RStudio python package mne-python
    Python Package Mne Python, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mne/python+package+mne+python/pm36584677-649-15-54
    Average 90 stars, based on 1 article reviews
    python package mne-python - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    other:

    Article Title: Updating memories of unwanted emotions during human sleep.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and algorithms Python 3.7 https://www.python.org/ RRID: SCR_008394 Python package "MNE-Python"(v 1.1.1) https://mne.tools/stable/index.html RRID: SCR_005972 Python package "Pingouin"(v 0.5.2) https://pingouin-stats.org/api.html RRID: SCR_022261 Python package "Numpy"(v 1.19.2) https://numpy.org/ RRID: SCR_008633 Python package "YASA"(v 0.6.2) https://raphaelvallat.com/yasa/build/html/index.html N/A Python package "pandas"(v 1.1.3) https://pandas.pydata.org/ RRID: SCR_018214 Python package "seaborn"(v 0.11.2) https://seaborn.pydata.org/index.html RRID: SCR_018132 R Studio 2022.02.2 Build 485 https://www.rstudio.com/ RRID: SCR_000432 R (4.2.0) https://www.r-project.org/ RRID: SCR_001905 R package ‘‘lme4’’ (v1.1-29) https://github.com/lme4/lme4/ RRID: SCR_015654 R package ‘‘lmerTest’’ (v3.1-3) https://github.com/runehaubo/lmerTestR RRID: SCR_015656 Jamovi (v 2.3.13 ) https://www.jamovi.org/ RRID: SCR_016142



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    Basal serum expression levels of miR-34a and miR-506 in patients with PBC and PSC before the introduction of UDCA treatment. miR-34a ( A ) expression was significantly elevated in PBC patients compared to age- and sex-matched healthy controls, while no significant difference was observed in PSC patients due to high intra-group variability. miR-506 ( B ) expression was markedly elevated—by several-dozen-fold—in PBC patients relative to controls. Comparisons between experimental groups were performed using the Mann–Whitney U test. Data are presented as mean ± SEM. Abbreviations: PBC, primary biliary cholangitis; PSC, primary sclerosing cholangitis; UDCA, ursodeoxycholic acid.

    Journal: Cells

    Article Title: The Effect of Ursodeoxycholic Acid (UDCA) on Serum Expression of miR-34a and miR-506 in Patients with Chronic Cholestatic Liver Diseases

    doi: 10.3390/cells14151137

    Figure Lengend Snippet: Basal serum expression levels of miR-34a and miR-506 in patients with PBC and PSC before the introduction of UDCA treatment. miR-34a ( A ) expression was significantly elevated in PBC patients compared to age- and sex-matched healthy controls, while no significant difference was observed in PSC patients due to high intra-group variability. miR-506 ( B ) expression was markedly elevated—by several-dozen-fold—in PBC patients relative to controls. Comparisons between experimental groups were performed using the Mann–Whitney U test. Data are presented as mean ± SEM. Abbreviations: PBC, primary biliary cholangitis; PSC, primary sclerosing cholangitis; UDCA, ursodeoxycholic acid.

    Article Snippet: The levels of miR-34a (478048_mir) and miR-506 (478958_mir), along with miR-16 (477860_mir), which was used as an endogenous control, were measured using TaqMan ® Advanced miRNA Assays (Applied Biosystems).

    Techniques: Expressing, MANN-WHITNEY

    The effect of UDCA treatment on the serum expression of miR-34a and miR-506. UDCA suppressed the expression of miR-34a ( A ) and miR-506 ( C ) in patients with PBC but not PSC ( B ). Each symbol represents one patient. A Student’s paired t -test was used to test statistical significance. The median duration of UDCA administration was 44 months (range: 22–56 months). PBC, primary biliary cholangitis; PSC, primary sclerosing cholangitis; UDCA naive, values before the introduction of ursodeoxycholic acid; UDCA, after treatment with UDCA.

    Journal: Cells

    Article Title: The Effect of Ursodeoxycholic Acid (UDCA) on Serum Expression of miR-34a and miR-506 in Patients with Chronic Cholestatic Liver Diseases

    doi: 10.3390/cells14151137

    Figure Lengend Snippet: The effect of UDCA treatment on the serum expression of miR-34a and miR-506. UDCA suppressed the expression of miR-34a ( A ) and miR-506 ( C ) in patients with PBC but not PSC ( B ). Each symbol represents one patient. A Student’s paired t -test was used to test statistical significance. The median duration of UDCA administration was 44 months (range: 22–56 months). PBC, primary biliary cholangitis; PSC, primary sclerosing cholangitis; UDCA naive, values before the introduction of ursodeoxycholic acid; UDCA, after treatment with UDCA.

    Article Snippet: The levels of miR-34a (478048_mir) and miR-506 (478958_mir), along with miR-16 (477860_mir), which was used as an endogenous control, were measured using TaqMan ® Advanced miRNA Assays (Applied Biosystems).

    Techniques: Expressing

    Effects of UDCA on LPS-induced expression of TREM-2, miR-34a, and ADAM17 in NHC cell lines. qPCR analysis demonstrated that TREM-2 ( A ) was not induced by LPS stimulation alone; however, co-treatment with UDCA resulted in activation of this gene. The LPS-induced expression of miR-34a ( B ) and ADAM17 ( C ) mRNA was significantly suppressed by co-treatment with UDCA. Data are presented as mean ± SEM from four independent experiments. Statistical analysis was performed using two-way ANOVA followed by Fisher’s least significant difference (LSD) test. Abbreviations: ADAM17, a disintegrin and metalloprotease 17; LPS, lipopolysaccharide from Escherichia coli; NHC, normal human cholangiocytes; TREM-2, triggering receptor expressed on myeloid cells 2; UDCA, ursodeoxycholic acid.

    Journal: Cells

    Article Title: The Effect of Ursodeoxycholic Acid (UDCA) on Serum Expression of miR-34a and miR-506 in Patients with Chronic Cholestatic Liver Diseases

    doi: 10.3390/cells14151137

    Figure Lengend Snippet: Effects of UDCA on LPS-induced expression of TREM-2, miR-34a, and ADAM17 in NHC cell lines. qPCR analysis demonstrated that TREM-2 ( A ) was not induced by LPS stimulation alone; however, co-treatment with UDCA resulted in activation of this gene. The LPS-induced expression of miR-34a ( B ) and ADAM17 ( C ) mRNA was significantly suppressed by co-treatment with UDCA. Data are presented as mean ± SEM from four independent experiments. Statistical analysis was performed using two-way ANOVA followed by Fisher’s least significant difference (LSD) test. Abbreviations: ADAM17, a disintegrin and metalloprotease 17; LPS, lipopolysaccharide from Escherichia coli; NHC, normal human cholangiocytes; TREM-2, triggering receptor expressed on myeloid cells 2; UDCA, ursodeoxycholic acid.

    Article Snippet: The levels of miR-34a (478048_mir) and miR-506 (478958_mir), along with miR-16 (477860_mir), which was used as an endogenous control, were measured using TaqMan ® Advanced miRNA Assays (Applied Biosystems).

    Techniques: Expressing, Activation Assay