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LC Sciences mirna microarray service
Mirna Microarray Service, supplied by LC Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Microarray:

Article Title: microRNA-140 targets RALA and regulates chondrogenic differentiation of human mesenchymal stem cells by translational enhancement of SOX9 and ACAN.
Article Snippet: Lesions of articular cartilage do not heal spontaneously.. One treatment strategy would be to make cartilage in the laboratory by directed chondrogenic differentiation of mesenchymal stem cells (MSCs).. To promote our understanding of the molecular control of chondrogenesis, we have compared the changes in microRNAs (miRNAs) during in vitro chondrogenesis of MSCs with those observed in uncultured and dedifferentiated articular chondrocytes (ACs).

Article Title: Genome-Scale Mapping of MicroRNA Signatures in Human Embryonic Stem Cell Neurogenesis
Article Snippet: .. The human miRNA expression profiling was done and the microarray data analysis from at least two biological replicate sets (e.g., WA01 and WA09) was provided by LC Sciences (Huston, TX, www.lcsciences.com ) as part of miRNA microarray service. ..

Article Title: Preeclampsia Up-Regulates Angiogenesis-Associated MicroRNA ( i.e ., miR-17, -20a, and -20b) That Target Ephrin-B2 and EPHB4 in Human Placenta
Article Snippet: For the transfected cells, total RNA were extracted using Trizol reagent (Invitrogen, Carlsbad, CA) following the manufacturer's protocol. .. The differential miRNA expression profile was analyzed by a miRNA microarray service provider (LC Sciences, Houston, TX) on three pairs of control and PE samples. ..

Article Title: MicroRNA expression profile in Lieber-DeCarli diet-induced alcoholic and methinine choline deficient (MCD) diet-induced non-alcoholic steatohepatitis models in mice
Article Snippet: Cytokine Measurements Serum TNFα level was determined using the Pierce SearchLight Multiplex Cytokine array (Pierce Biotechnology, Inc., Woburn, MA). microRNA analysis Total RNA was isolated from snap-frozen livers with organic and solid-phase extraction using mir Vana miRNA Isolation Kit, which allows for miRNAs preservation (Applied Biosystems/Ambion, Austin, TX, catalog #1560), and quantified by spectrophotometry (BioPhotometer, Eppendorf, Westbury, NY). .. Total liver RNA (5 μg) samples were analyzed for miRNA profile at LC Sciences LLC (Houston, TX) using miRNA Microarray Service. ..

Article Title: High-Throughput Sequencing Reveals Differential Expression of miRNAs in Intestine from Sea Cucumber during Aestivation
Article Snippet: .. After confirming their integrity, the total RNA was sent to LC Sciences (Hangzhou, China) to be processed using their miRNA Microarray Service. .. Each chip produced contained probes for 341 sea cucumber miRNAs from Solexa sequencing, 546 sea squirt Ciona intestinalis miRNAs, 101 acorn worm Saccoglossus kowalevskii miRNAs and 50 sea urchin S. purpuratus miRNAs from miRBase v 19.0.

Article Title: Large-scale identification and comparative analysis of miRNA expression profile in the respiratory tree of the sea cucumber Apostichopus japonicus during aestivation.
Article Snippet: Contents lists available at ScienceDirect Marine Genomics j ourna l homepage: www.e lsev ie r .com/ locate /margen Short communication Large-scale identification and comparative analysis of miRNA expression profile in the respiratory tree of the sea cucumber Apostichopus japonicus during aestivation Muyan Chen a,⁎, Kenneth B. Storey b a Fisheries College, Ocean University of China, Qingdao, PR China b Institute of Biochemistry, Carleton University, 1125 Colonel By Drive, Ottawa, ON K1S 5B6, Canada ⁎ Corresponding author.. E-mail address: chenmuyan@gmail.com (M. Chen).. 1874-7787/$ – see front matter © 2014 Elsevier B.V. All ri http://dx.doi.org/10.1016/j.margen.2014.01.002 a b s t r a c t a r t i c l e i n f o Article history: Received 19 November 2013 Received in revised form 7 January 2014 Accepted 8 January 2014 Keywords: miRNA Sea cucumber Aestivation Respiratory tree Solexa deep sequencing The sea cucumber Apostichopus japonicuswithstands high water temperatures in the summer by suppressing its metabolic rate and entering a state of aestivation.

Expressing:

Article Title: Genome-Scale Mapping of MicroRNA Signatures in Human Embryonic Stem Cell Neurogenesis
Article Snippet: .. The human miRNA expression profiling was done and the microarray data analysis from at least two biological replicate sets (e.g., WA01 and WA09) was provided by LC Sciences (Huston, TX, www.lcsciences.com ) as part of miRNA microarray service. ..

Article Title: Preeclampsia Up-Regulates Angiogenesis-Associated MicroRNA ( i.e ., miR-17, -20a, and -20b) That Target Ephrin-B2 and EPHB4 in Human Placenta
Article Snippet: For the transfected cells, total RNA were extracted using Trizol reagent (Invitrogen, Carlsbad, CA) following the manufacturer's protocol. .. The differential miRNA expression profile was analyzed by a miRNA microarray service provider (LC Sciences, Houston, TX) on three pairs of control and PE samples. ..

Article Title: Comparative profiling of miRNA expression of lung adenocarcinoma cells in two-dimensional and three-dimensional cultures
Article Snippet: .. The miRNA expression profiling service was provided by LC Sciences (Houston, TX) using μParaflo® technology and proprietary probe hybridization (Cy3 and Cy5 dendrimer dyes) that enables highly sensitive and specific direct detection of mouse miRNAs. ..

other:

Article Title: Extracellular vesicles extracted from young donor serum attenuate inflammaging via partially rejuvenating aged T‐cell immunotolerance
Article Snippet: In addition, we checked miRNA profiles of serum EVs extracted from young and aged mice with microarray of MusmusculusmiRBase version-21 array chips,where each chip contained 1900 unique mature miRNA probes (miRNA microarray service via LC Sciences).

Control:

Article Title: Preeclampsia Up-Regulates Angiogenesis-Associated MicroRNA ( i.e ., miR-17, -20a, and -20b) That Target Ephrin-B2 and EPHB4 in Human Placenta
Article Snippet: For the transfected cells, total RNA were extracted using Trizol reagent (Invitrogen, Carlsbad, CA) following the manufacturer's protocol. .. The differential miRNA expression profile was analyzed by a miRNA microarray service provider (LC Sciences, Houston, TX) on three pairs of control and PE samples. ..

Hybridization:

Article Title: Comparative profiling of miRNA expression of lung adenocarcinoma cells in two-dimensional and three-dimensional cultures
Article Snippet: .. The miRNA expression profiling service was provided by LC Sciences (Houston, TX) using μParaflo® technology and proprietary probe hybridization (Cy3 and Cy5 dendrimer dyes) that enables highly sensitive and specific direct detection of mouse miRNAs. ..



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List of differentially expressed microRNAs (miRNAs) in bronchial smooth muscle of antigen-induced airway hyperresponsive (AHR) mice.
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Characteristics of serum-extracted EVs. A) Comparison of the sizes of EVs extracted from young murine serum by the ExoQuick reagent pretreated with and without using 0.2-μm filters. B) Morphology of EVs from young murine serum used in this project for rejuvenation of inflammaging, photographed by atomic force microscopy (AFM). C, D) Different <t>miRNA</t> expression profiles in heatmap (C) and quantified summary (D) of EVs from young vs. old murine serum, analyzed by murine miRNA <t>microarray</t> with Mus musculus miRBase version-21 arrays that contained 1900 unique mature miRNA probes (miRNA microarray service via LC Sciences).
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List of differentially expressed microRNAs (miRNAs) in bronchial smooth muscle of antigen-induced airway hyperresponsive (AHR) mice.

Journal: International Journal of Molecular Sciences

Article Title: Downregulation of miR-140-3p Contributes to Upregulation of CD38 Protein in Bronchial Smooth Muscle Cells

doi: 10.3390/ijms21217982

Figure Lengend Snippet: List of differentially expressed microRNAs (miRNAs) in bronchial smooth muscle of antigen-induced airway hyperresponsive (AHR) mice.

Article Snippet: miRNA microarray services were contracted out to Cosmo Bio Co., Ltd. (Tokyo, Japan).

Techniques: Sequencing, Expressing

Downregulation of miR-140-3p in bronchial smooth muscles of antigen-induced airway hyperresponsive (AHR) mice. The ovalbumin (OA)-immunized animals were repeatedly challenged with aerosolized OA solution, and total RNAs including miRNAs were extracted from the main bronchi 24 h after the last challenge. The miR-140-3p levels were determined by quantitative real-time reverse transcriptase-polymerase chain reaction. The relative expression of miR-140-3p to U6 snRNA was calculated by the 2 − ΔΔCT methods as described in the methods section. Results are presented as mean ± S.E. from six animals, respectively. ** p < 0.01 versus control animal (Cont) by unpaired Student’s t -test.

Journal: International Journal of Molecular Sciences

Article Title: Downregulation of miR-140-3p Contributes to Upregulation of CD38 Protein in Bronchial Smooth Muscle Cells

doi: 10.3390/ijms21217982

Figure Lengend Snippet: Downregulation of miR-140-3p in bronchial smooth muscles of antigen-induced airway hyperresponsive (AHR) mice. The ovalbumin (OA)-immunized animals were repeatedly challenged with aerosolized OA solution, and total RNAs including miRNAs were extracted from the main bronchi 24 h after the last challenge. The miR-140-3p levels were determined by quantitative real-time reverse transcriptase-polymerase chain reaction. The relative expression of miR-140-3p to U6 snRNA was calculated by the 2 − ΔΔCT methods as described in the methods section. Results are presented as mean ± S.E. from six animals, respectively. ** p < 0.01 versus control animal (Cont) by unpaired Student’s t -test.

Article Snippet: miRNA microarray services were contracted out to Cosmo Bio Co., Ltd. (Tokyo, Japan).

Techniques: Muscles, Reverse Transcription, Polymerase Chain Reaction, Expressing, Control

Upregulation of CD38 protein ( A ) but not mRNA ( B ) in bronchial smooth muscles of antigen-induced airway hyperresponsive (AHR) mice. The ovalbumin (OA)-immunized animals were repeatedly challenged with aerosolized OA solution, and proteins and total RNAs including miRNAs were extracted from the main bronchi 24 h after the last challenge. The protein ( A ) and mRNA ( B ) levels of CD38 were determined by immunoblotting and quantitative real-time reverse transcriptase-polymerase chain reaction, respectively. The relative expressions of CD38 to glyceraldehyde 3-phosphate dehydrogenase (GAPDH; ( A , B )) were calculated as described in the methods section. Results are presented as mean ± S.E. from six animals, respectively. ** p < 0.01 versus control animal (Cont) by unpaired Student’s t -test.

Journal: International Journal of Molecular Sciences

Article Title: Downregulation of miR-140-3p Contributes to Upregulation of CD38 Protein in Bronchial Smooth Muscle Cells

doi: 10.3390/ijms21217982

Figure Lengend Snippet: Upregulation of CD38 protein ( A ) but not mRNA ( B ) in bronchial smooth muscles of antigen-induced airway hyperresponsive (AHR) mice. The ovalbumin (OA)-immunized animals were repeatedly challenged with aerosolized OA solution, and proteins and total RNAs including miRNAs were extracted from the main bronchi 24 h after the last challenge. The protein ( A ) and mRNA ( B ) levels of CD38 were determined by immunoblotting and quantitative real-time reverse transcriptase-polymerase chain reaction, respectively. The relative expressions of CD38 to glyceraldehyde 3-phosphate dehydrogenase (GAPDH; ( A , B )) were calculated as described in the methods section. Results are presented as mean ± S.E. from six animals, respectively. ** p < 0.01 versus control animal (Cont) by unpaired Student’s t -test.

Article Snippet: miRNA microarray services were contracted out to Cosmo Bio Co., Ltd. (Tokyo, Japan).

Techniques: Muscles, Western Blot, Reverse Transcription, Polymerase Chain Reaction, Control

Effects of interleukin-13 (IL-13) on the expressions of miR-140-3p ( A ) and CD38 mRNA ( B ) in cultured human bronchial smooth muscle cells. Cells were treated with IL-13 (100 ng/mL) or its vehicle (Veh) for 24 h and total RNAs including miRNAs were extracted. The gene expressions were determined by quantitative real-time reverse transcriptase-polymerase chain reaction. The relative gene expressions of miR-140-3p to U6 snRNA ( A ) and CD38 to GAPDH mRNAs ( B ) were calculated by the 2 − ΔΔCT methods as described in the methods section. Results are presented as mean ± S.E. from six independent experiments. ** p < 0.01 versus Veh by unpaired Student’s t -test.

Journal: International Journal of Molecular Sciences

Article Title: Downregulation of miR-140-3p Contributes to Upregulation of CD38 Protein in Bronchial Smooth Muscle Cells

doi: 10.3390/ijms21217982

Figure Lengend Snippet: Effects of interleukin-13 (IL-13) on the expressions of miR-140-3p ( A ) and CD38 mRNA ( B ) in cultured human bronchial smooth muscle cells. Cells were treated with IL-13 (100 ng/mL) or its vehicle (Veh) for 24 h and total RNAs including miRNAs were extracted. The gene expressions were determined by quantitative real-time reverse transcriptase-polymerase chain reaction. The relative gene expressions of miR-140-3p to U6 snRNA ( A ) and CD38 to GAPDH mRNAs ( B ) were calculated by the 2 − ΔΔCT methods as described in the methods section. Results are presented as mean ± S.E. from six independent experiments. ** p < 0.01 versus Veh by unpaired Student’s t -test.

Article Snippet: miRNA microarray services were contracted out to Cosmo Bio Co., Ltd. (Tokyo, Japan).

Techniques: Cell Culture, Reverse Transcription, Polymerase Chain Reaction

Characteristics of serum-extracted EVs. A) Comparison of the sizes of EVs extracted from young murine serum by the ExoQuick reagent pretreated with and without using 0.2-μm filters. B) Morphology of EVs from young murine serum used in this project for rejuvenation of inflammaging, photographed by atomic force microscopy (AFM). C, D) Different miRNA expression profiles in heatmap (C) and quantified summary (D) of EVs from young vs. old murine serum, analyzed by murine miRNA microarray with Mus musculus miRBase version-21 arrays that contained 1900 unique mature miRNA probes (miRNA microarray service via LC Sciences).

Journal: The FASEB Journal

Article Title: Extracellular vesicles extracted from young donor serum attenuate inflammaging via partially rejuvenating aged T-cell immunotolerance

doi: 10.1096/fj.201800059R

Figure Lengend Snippet: Characteristics of serum-extracted EVs. A) Comparison of the sizes of EVs extracted from young murine serum by the ExoQuick reagent pretreated with and without using 0.2-μm filters. B) Morphology of EVs from young murine serum used in this project for rejuvenation of inflammaging, photographed by atomic force microscopy (AFM). C, D) Different miRNA expression profiles in heatmap (C) and quantified summary (D) of EVs from young vs. old murine serum, analyzed by murine miRNA microarray with Mus musculus miRBase version-21 arrays that contained 1900 unique mature miRNA probes (miRNA microarray service via LC Sciences).

Article Snippet: Then, 1–3 μg of total RNAs for each sample were used for customized miRNA microarray service from LC Sciences (Houston, TX, USA).

Techniques: Comparison, Microscopy, Expressing, Microarray