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3d x-ray microscopy data analysis  (GraphPad Software Inc)


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    Structured Review

    GraphPad Software Inc 3d x-ray microscopy data analysis
    Intracochlear neo-ossification relative to platinum and PDMS bearing surfaces. <t>3D</t> X-ray <t>microscopy</t> images of a single chronically implanted mouse cochlea (A,B,C) with the CI imaged in-situ were volumetrically segmented to compare the amount of neo-ossification in 3 separate areas: the area immediately adjacent to platinum electrode surfaces “Electrode” (red), the area adjacent to PDMS surfaces toward the backside of the electrode contact surface “Anti-electrode” (green), and the intracochlear portions basal to the E1 electrode “Non-electrode” (blue). Dashed lines in (A) denote the manual separation of the “Electrode” (red) and “Anti-electrode” (green) areas in which neo-ossification was volumetrically quantified and in (B,C) indicate the basal and apical limits confining the “Electrode” and “Anti-electrode” areas, with the “Non-electrode” area being basal to this area, stopping at the round window. “E1”, “E2” and “E3” denotes electrode contacts 1,2 and 3, respectively; “M” denotes modiolus; “RW” denotes the round window outlined by a red hashed circle in (B,C). The gray and dark yellow shading in (B) represent the open scala tympani space and areas of soft tissue fibrosis without neo-ossification, respectively. Mean quantification of volume of neo-ossification across n = 6 subjects with individual data points noted as dots and error bars representing 1 standard deviation is shown in (D). The greatest volume of neo-ossification was seen in the “Electrode” area immediately adjacent to the Platinum electrodes, followed by the “Anti-electrode” and “Non-electrode” areas, however these differences were not significant (p > 0.05).
    3d X Ray Microscopy Data Analysis, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microscopy+image+analysis+software/3d+x+ray+microscopy+data+analysis/pmc10875706-173-0-7
    Average 90 stars, based on 1 article reviews
    3d x-ray microscopy data analysis - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "Cochlear implant material effects on inflammatory cell function and foreign body response"

    Article Title: Cochlear implant material effects on inflammatory cell function and foreign body response

    Journal: Hearing research

    doi: 10.1016/j.heares.2022.108597

    Intracochlear neo-ossification relative to platinum and PDMS bearing surfaces. 3D X-ray microscopy images of a single chronically implanted mouse cochlea (A,B,C) with the CI imaged in-situ were volumetrically segmented to compare the amount of neo-ossification in 3 separate areas: the area immediately adjacent to platinum electrode surfaces “Electrode” (red), the area adjacent to PDMS surfaces toward the backside of the electrode contact surface “Anti-electrode” (green), and the intracochlear portions basal to the E1 electrode “Non-electrode” (blue). Dashed lines in (A) denote the manual separation of the “Electrode” (red) and “Anti-electrode” (green) areas in which neo-ossification was volumetrically quantified and in (B,C) indicate the basal and apical limits confining the “Electrode” and “Anti-electrode” areas, with the “Non-electrode” area being basal to this area, stopping at the round window. “E1”, “E2” and “E3” denotes electrode contacts 1,2 and 3, respectively; “M” denotes modiolus; “RW” denotes the round window outlined by a red hashed circle in (B,C). The gray and dark yellow shading in (B) represent the open scala tympani space and areas of soft tissue fibrosis without neo-ossification, respectively. Mean quantification of volume of neo-ossification across n = 6 subjects with individual data points noted as dots and error bars representing 1 standard deviation is shown in (D). The greatest volume of neo-ossification was seen in the “Electrode” area immediately adjacent to the Platinum electrodes, followed by the “Anti-electrode” and “Non-electrode” areas, however these differences were not significant (p > 0.05).
    Figure Legend Snippet: Intracochlear neo-ossification relative to platinum and PDMS bearing surfaces. 3D X-ray microscopy images of a single chronically implanted mouse cochlea (A,B,C) with the CI imaged in-situ were volumetrically segmented to compare the amount of neo-ossification in 3 separate areas: the area immediately adjacent to platinum electrode surfaces “Electrode” (red), the area adjacent to PDMS surfaces toward the backside of the electrode contact surface “Anti-electrode” (green), and the intracochlear portions basal to the E1 electrode “Non-electrode” (blue). Dashed lines in (A) denote the manual separation of the “Electrode” (red) and “Anti-electrode” (green) areas in which neo-ossification was volumetrically quantified and in (B,C) indicate the basal and apical limits confining the “Electrode” and “Anti-electrode” areas, with the “Non-electrode” area being basal to this area, stopping at the round window. “E1”, “E2” and “E3” denotes electrode contacts 1,2 and 3, respectively; “M” denotes modiolus; “RW” denotes the round window outlined by a red hashed circle in (B,C). The gray and dark yellow shading in (B) represent the open scala tympani space and areas of soft tissue fibrosis without neo-ossification, respectively. Mean quantification of volume of neo-ossification across n = 6 subjects with individual data points noted as dots and error bars representing 1 standard deviation is shown in (D). The greatest volume of neo-ossification was seen in the “Electrode” area immediately adjacent to the Platinum electrodes, followed by the “Anti-electrode” and “Non-electrode” areas, however these differences were not significant (p > 0.05).

    Techniques Used: Microscopy, In Situ, Standard Deviation

    Related Articles

    Microscopy:

    Article Title: Cochlear implant material effects on inflammatory cell function and foreign body response
    Article Snippet: 3D X-ray microscopy data were analyzed in GraphPad Prism software (Graph-Pad Software, USA) via ordinary one-way ANOVA.

    Software:

    Article Title: Cochlear implant material effects on inflammatory cell function and foreign body response
    Article Snippet: 3D X-ray microscopy data were analyzed in GraphPad Prism software (Graph-Pad Software, USA) via ordinary one-way ANOVA.

    In Situ:

    Article Title: Cochlear implant material effects on inflammatory cell function and foreign body response
    Article Snippet: 3D X-ray microscopy data were analyzed in GraphPad Prism software (Graph-Pad Software, USA) via ordinary one-way ANOVA.

    Standard Deviation:

    Article Title: Cochlear implant material effects on inflammatory cell function and foreign body response
    Article Snippet: 3D X-ray microscopy data were analyzed in GraphPad Prism software (Graph-Pad Software, USA) via ordinary one-way ANOVA.



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