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full-transcriptome microarray formaldehyde fixed-paraffin embedded (ffpe) data  (Agendia BV)

 
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    Agendia BV full-transcriptome microarray formaldehyde fixed-paraffin embedded (ffpe) data
    Full Transcriptome Microarray Formaldehyde Fixed Paraffin Embedded (Ffpe) Data, supplied by Agendia BV, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarrays+transcriptomic+data/full+transcriptome+microarray+formaldehyde+fixed+paraffin+embedded++ffpe++data/pmc09299843-44-14-20
    Average 90 stars, based on 1 article reviews
    full-transcriptome microarray formaldehyde fixed-paraffin embedded (ffpe) data - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: MammaPrint and BluePrint comprehensively capture the cancer hallmarks in early‐stage breast cancer patients
    Article Snippet: .. To perform DGEA and GSEA, we selected a discovery set of full‐transcriptome microarray formaldehyde fixed‐paraffin embedded (FFPE) data generated at Agendia between January 2014 and June 2019 for which MP and BP results were available. ..

    Formalin-fixed Paraffin-Embedded:

    Article Title: MammaPrint and BluePrint comprehensively capture the cancer hallmarks in early‐stage breast cancer patients
    Article Snippet: .. To perform DGEA and GSEA, we selected a discovery set of full‐transcriptome microarray formaldehyde fixed‐paraffin embedded (FFPE) data generated at Agendia between January 2014 and June 2019 for which MP and BP results were available. ..

    Generated:

    Article Title: MammaPrint and BluePrint comprehensively capture the cancer hallmarks in early‐stage breast cancer patients
    Article Snippet: .. To perform DGEA and GSEA, we selected a discovery set of full‐transcriptome microarray formaldehyde fixed‐paraffin embedded (FFPE) data generated at Agendia between January 2014 and June 2019 for which MP and BP results were available. ..



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    Image Search Results


    ( A ) PCA of global transcriptomic differences. ( B ) Heatmap of globally DEGs when modeled as ~ PDX_ID + RTS. ( C ) Volcano plot of globally DEGs when modeled by ~RTS alone (red text meets cutoffs of log 2 fold change > 2 or < –2, adjusted P < 0.05). ( D ) Circos plot of differentially regulated lncRNAs (red) with their direct DNA binding targets (black) and differentially regulated lncRNAs (blue) with their DNA binding sites.

    Journal: JCI Insight

    Article Title: An in vivo model of glioblastoma radiation resistance identifies long noncoding RNAs and targetable kinases

    doi: 10.1172/jci.insight.148717

    Figure Lengend Snippet: ( A ) PCA of global transcriptomic differences. ( B ) Heatmap of globally DEGs when modeled as ~ PDX_ID + RTS. ( C ) Volcano plot of globally DEGs when modeled by ~RTS alone (red text meets cutoffs of log 2 fold change > 2 or < –2, adjusted P < 0.05). ( D ) Circos plot of differentially regulated lncRNAs (red) with their direct DNA binding targets (black) and differentially regulated lncRNAs (blue) with their DNA binding sites.

    Article Snippet: Of these, existing Affymetrix transcriptomic microarray data were available for 13 PDX lines ( n = 7 sensitive, n = 6 resistant).

    Techniques: Binding Assay