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metamorph tracking plugin  (MetaMorph Inc)

 
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    MetaMorph Inc metamorph tracking plugin
    SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ <t>plugin</t> (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from <t>Metamorph</t> <t>tracking</t> (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.
    Metamorph Tracking Plugin, supplied by MetaMorph Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/metamorph+tracking+plugin/metamorph+tracking+module/pmc07865731-286-7-6
    Average 90 stars, based on 1 article reviews
    metamorph tracking plugin - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "Glutamine Uptake via SNAT6 and Caveolin Regulates Glutamine–Glutamate Cycle"

    Article Title: Glutamine Uptake via SNAT6 and Caveolin Regulates Glutamine–Glutamate Cycle

    Journal: International Journal of Molecular Sciences

    doi: 10.3390/ijms22031167

    SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ plugin (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from Metamorph tracking (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.
    Figure Legend Snippet: SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ plugin (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from Metamorph tracking (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.

    Techniques Used: Expressing, Microscopy, Fluorescence, Labeling, Derivative Assay, Transfection, Sequencing

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    Article Snippet: .. Furthermore the movies were analyzed using the MetaMorph tracker plugin “track objects” to evaluate the mean velocity of the vesicles in control cells versus cells silenced for Kinesin-2. .. For the analysis of RAB5 endosomes on the mitotic spindle, time lapse of cells stably expressing YFP-RAB5 and RFP–α-tubulin was done with an UltraVIEW VoX spinning disk confocal unit (PerkinElmer, Waltham, MA, USA) equipped with an inverted Nikon Eclipse Ti microscope and a Yokogawa CSU-X1 scanning head driven by Volocity software (Improvision; PerkinElmer).

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    Article Snippet: and chemical synthesis/assembly.. [ 18 ] Microfl uidics offers several advantages over conventional batch reaction or assembly, such as continuous and automatic processing, precise control over synthetic conditions, and high reproducibility.. [ 19 ] Microfl uidic approaches have been used for the assembly of amphiphilic building blocks such as lipids, block copolymers (BCPs), and inorganic NPs into vesicular structures with superior controllability.

    Software:

    Article Title: Continuous Microfluidic Self-Assembly of Hybrid Janus-Like Vesicular Motors: Autonomous Propulsion and Controlled Release.
    Article Snippet: and chemical synthesis/assembly.. [ 18 ] Microfl uidics offers several advantages over conventional batch reaction or assembly, such as continuous and automatic processing, precise control over synthetic conditions, and high reproducibility.. [ 19 ] Microfl uidic approaches have been used for the assembly of amphiphilic building blocks such as lipids, block copolymers (BCPs), and inorganic NPs into vesicular structures with superior controllability.

    Article Title: RBC micromotors carrying multiple cargos towards potential theranostic applications.
    Article Snippet: Red blood cell (RBC)-based micromotors containing both therapeutic and diagnostic modalities are described as a means for potential theranostic applications.. In this natural RBC-based multicargo-loaded micromotor system, quantum dots (QDs), anti-cancer drug doxorubicin (DOX), and magnetic nanoparticles (MNPs), were co-encapsulated into RBC micromotors.. The fluorescent emission of both QDs and DOX provides direct visualization of their loading inside the RBC motors at two distinct wavelengths.

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    Article Snippet: The images were processed using Metamorph software, approximately 20 cells were analyzed for each condition.

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    Article Snippet: The resulting images were analyzed with MetaMorph Object-Track to determine beat frequency.

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    Article Snippet: The nanomotor movement was tracked using Metamorph tracking module and the results were analyzed using Origin Pro 7.5 software.



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    SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ <t>plugin</t> (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from <t>Metamorph</t> <t>tracking</t> (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.
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    SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ <t>plugin</t> (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from <t>Metamorph</t> <t>tracking</t> (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.
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    Image Search Results


    SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ plugin (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from Metamorph tracking (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.

    Journal: International Journal of Molecular Sciences

    Article Title: Glutamine Uptake via SNAT6 and Caveolin Regulates Glutamine–Glutamate Cycle

    doi: 10.3390/ijms22031167

    Figure Lengend Snippet: SNAT6 associated caveolin complexes internalize in response to glutamine and glutamate in a Na + dependent manner. ( A ) Images of cells expressing SNAT6-EGFP and Caveolin1-mCherry under TIRF microscopy before and after stimulation with glutamine. An ImageJ plugin (described in methods) detecting the SNAT6 and caveolin clusters. ( B ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified using the method above before and after stimulations with different amino acids specified in the figure (density of clusters was significantly decreased under Glu, Gln, and Ala, p < 0.001). ( C ) Trace showing fluorescence of the entire single cell for caveolin. Note that the stimulation with glutamine was initiated at time zero. ( D ) Images from antibody labeled SNAT6 and caveolin localizing together (44 ± 7% in six cells derived from two independent experiments). ( E ) Similar to C but showing average fluorescence for 10 cells from three different transfections under glutamate stimulation. ( F – I ) Similar to E for cells stimulated with glutamine (11 cells), alanine (13 cells), lysine (12 cells), and proline (9 cells). All the experiments were performed from at least three different transfections. ( J ) Images showing caveolin-mCherry expressing cells with and without Na + present in the buffer when stimulated with glutamine. Tracks obtained from Metamorph tracking (described in methods) during the entire time sequence. zoomed tracks and images in the inset ( K ) Average speed for the tracks in ( J ) in presence and absence of Na + in the buffer under glutamine stimulation (* p < 0.05). ( L ) Histogram of 16–60 tracks from 9 different cells per condition similar to the cell shown in ( I ). Displacement of caveolin in presence (lavender) and absence (orange) of Na + in the buffer under glutamine stimulation. ( M ) Density of SNAT6 (green) and Caveolin (grey) clusters quantified as in B before and after stimulations with glutamine in presence and absence of Na + in the buffer.

    Article Snippet: Tracking experiments were performed using a Metamorph tracking plugin with pixel size cut off = 5.

    Techniques: Expressing, Microscopy, Fluorescence, Labeling, Derivative Assay, Transfection, Sequencing