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homemade matlab software package  (MathWorks Inc)


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    MathWorks Inc homemade matlab software package
    Homemade Matlab Software Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 326 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab-based+opennanopore+software/MATLAB+Compiler/pmc09596471-73-8-9
    Average 96 stars, based on 326 article reviews
    homemade matlab software package - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    other:

    Article Title: An Integrated Framework for Automated Image Segmentation and Personalized Wall Stress Estimation of Abdominal Aortic Aneurysms.
    Article Snippet: The script can be compiled into a standalone executable (e.g., via MATLAB Compiler) that runs with the free MATLAB Runtime, so end users do not require a MATLAB license [45].

    Article Title: Autophagy dysfunction in iPSCs-derived neurons and midbrain organoids carrying a SNCA triplication.
    Article Snippet: Neural stat compiler files were used for data analysis in MATLAB.

    Article Title: Field Resistance to Powdery Mildew in Lycium barbarum Germplasm, Associated Leaf Anatomical Traits, and Temporal Physiological Responses in Ningqi-1
    Article Snippet: Nonlinear fitting of the continuously monitored disease index (DI) data was performed using MATLAB Compiler Runtime 8.3 (R2014a; The MathWorks, Inc., Natick, MA, USA) with four sigmoidal equations: (1) logistic(x) = (A1 − A2)/(1 + (x/x0)p) + A2; (2) slogistic1(x) = a/(1 + exp(−k × (x − xc))); (3) slogistic2(x) = a/(1 + ((a − y0)/y0) × exp(−4 × Wmax × x/a)); and (4) slogistic3(x) = a/(1 + b × exp(−k × x)).

    Generated:

    Article Title: WAH- i : Optimising Microphone Array Geometry for Customised Localisation Accuracy
    Article Snippet: .. To support deployment beyond a MATLAB development environment, standalone executables were generated using the MATLAB Compiler ( ). ..

    Analysis:

    Article Title: Thiolactone ring dynamics in dimeric lipids enable pH-switchable supramolecular tuning in surface-engineered quantum dots.
    Article Snippet: aSchool of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. bDepartment of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Ganjam, Odisha 760003, India cSchool of Materials Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. dDepartment of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India.

    Software:

    Article Title: Thiolactone ring dynamics in dimeric lipids enable pH-switchable supramolecular tuning in surface-engineered quantum dots.
    Article Snippet: aSchool of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. bDepartment of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Ganjam, Odisha 760003, India cSchool of Materials Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. dDepartment of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India.



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    MathWorks Inc homemade matlab software package based on opennanopore (version 1.2)
    Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on <t>OpenNanopore</t> to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.
    Homemade Matlab Software Package Based On Opennanopore (Version 1.2), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    MathWorks Inc matlab-based opennanopore software
    Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on <t>OpenNanopore</t> to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.
    Matlab Based Opennanopore Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on OpenNanopore to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.

    Journal: Scientific Reports

    Article Title: Calling the amino acid sequence of a protein/peptide from the nanospectrum produced by a sub-nanometer diameter pore

    doi: 10.1038/s41598-022-22305-x

    Figure Lengend Snippet: Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on OpenNanopore to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.

    Article Snippet: The nanospectra in ABFs were extracted using a homemade MATLAB software package based on OpenNanopore (version 1.2) .

    Techniques: Software, Generated