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loopseqtm 16s microbiome ssc kit  (Pacific Biosciences)

 
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    Pacific Biosciences loopseqtm 16s microbiome ssc kit
    Loopseqtm 16s Microbiome Ssc Kit, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/loopseqtm+16s+long+read+kit/16s+kit+loopseqtm+microbiome+ssc/pm41922545-88-10-28
    Average 86 stars, based on 1 article reviews
    loopseqtm 16s microbiome ssc kit - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Sequencing:

    Article Title: LPS-induced endometrial cell-derived exosomes suppress probiotic Lactobacillus growth.
    Article Snippet: Total genomic DNA was extracted using the QIAamp PowerFecal DNA Kit (Qiagen, Hilden, Germany), following the manufacturer's protocol. .. Full-length 16S ribosomal RNA gene sequencing was conducted using the LoopSeqTM 16S Microbiome SSC Kit and sequenced on the PacBio RS II Single Molecule Real-Time (SMRT) sequencing platform (Pacific Biosciences, Menlo Park, CA, USA). ..



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    Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon <t>16S</t> rRNA gene sequencing (blue) and full-length sequencing using the <t>16S/18S</t> kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.
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    Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon <t>16S</t> rRNA gene sequencing (blue) and full-length sequencing using the <t>16S/18S</t> kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.
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    Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon 16S rRNA gene sequencing (blue) and full-length sequencing using the 16S/18S kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.

    Journal: Microorganisms

    Article Title: Full-Length SSU rRNA Gene Sequencing Allows Species-Level Detection of Bacteria, Archaea, and Yeasts Present in Milk

    doi: 10.3390/microorganisms9061251

    Figure Lengend Snippet: Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon 16S rRNA gene sequencing (blue) and full-length sequencing using the 16S/18S kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.

    Article Snippet: On the other hand, the samples were processed by using the LoopSeqTM 16S & 18S Long Read Kit (Loop Genomics, San Jose, California, USA, highlighted orange in ).

    Techniques: Extraction, Amplification, Sequencing

    Relative abundance (%) at the kingdom and genus levels after the 16S/18S rRNA (SSU) gene sequencing analysis using the LoopGenomics kit. Taxonomic classification regarding the kingdom ( left ) and genus-level of the top 50 taxa ( right ) of each LoopSeq-sequenced milk sample. All of the other remaining taxa are shown in hatched blue.

    Journal: Microorganisms

    Article Title: Full-Length SSU rRNA Gene Sequencing Allows Species-Level Detection of Bacteria, Archaea, and Yeasts Present in Milk

    doi: 10.3390/microorganisms9061251

    Figure Lengend Snippet: Relative abundance (%) at the kingdom and genus levels after the 16S/18S rRNA (SSU) gene sequencing analysis using the LoopGenomics kit. Taxonomic classification regarding the kingdom ( left ) and genus-level of the top 50 taxa ( right ) of each LoopSeq-sequenced milk sample. All of the other remaining taxa are shown in hatched blue.

    Article Snippet: On the other hand, the samples were processed by using the LoopSeqTM 16S & 18S Long Read Kit (Loop Genomics, San Jose, California, USA, highlighted orange in ).

    Techniques: Sequencing

    Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon 16S rRNA gene sequencing (blue) and full-length sequencing using the 16S/18S kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.

    Journal: Microorganisms

    Article Title: Full-Length SSU rRNA Gene Sequencing Allows Species-Level Detection of Bacteria, Archaea, and Yeasts Present in Milk

    doi: 10.3390/microorganisms9061251

    Figure Lengend Snippet: Overview of the experimental procedure. Mock communities of known composition and bovine raw milk samples were used for the microbial gDNA extraction (grey above). The samples were prepared for short amplicon 16S rRNA gene sequencing (blue) and full-length sequencing using the 16S/18S kit targeting the SSU rRNA (orange). After the libraries were prepared, cleaned, and attested to be of good quality, the sequencing was performed on an Illumina MiSeq (grey, below). The execution time estimations in hours are shown for all steps.

    Article Snippet: The library preparation was performed as described by LoopGenomics for the LoopSeqTM 16S & 18S Long Read Kit (Version 2.1, Loop Genomics, San Jose, CA, USA).

    Techniques: Extraction, Amplification, Sequencing

    Relative abundance (%) at the kingdom and genus levels after the 16S/18S rRNA (SSU) gene sequencing analysis using the LoopGenomics kit. Taxonomic classification regarding the kingdom ( left ) and genus-level of the top 50 taxa ( right ) of each LoopSeq-sequenced milk sample. All of the other remaining taxa are shown in hatched blue.

    Journal: Microorganisms

    Article Title: Full-Length SSU rRNA Gene Sequencing Allows Species-Level Detection of Bacteria, Archaea, and Yeasts Present in Milk

    doi: 10.3390/microorganisms9061251

    Figure Lengend Snippet: Relative abundance (%) at the kingdom and genus levels after the 16S/18S rRNA (SSU) gene sequencing analysis using the LoopGenomics kit. Taxonomic classification regarding the kingdom ( left ) and genus-level of the top 50 taxa ( right ) of each LoopSeq-sequenced milk sample. All of the other remaining taxa are shown in hatched blue.

    Article Snippet: The library preparation was performed as described by LoopGenomics for the LoopSeqTM 16S & 18S Long Read Kit (Version 2.1, Loop Genomics, San Jose, CA, USA).

    Techniques: Sequencing