Review



long-read sequencing data gca_004360235.1  (Oxford Nanopore)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Oxford Nanopore long-read sequencing data gca_004360235.1
    GHS-R abundance was measured using an enzyme immunoassay in plasma of the common quail and the garden warbler. Boxplot of the concentration values for GHS-R detected in plasma samples of the common quail and the garden warbler. Given the high homology of the GHS-R <t>sequence</t> within avian species, the chicken anti-GHS-R antibody was sensitive and cross-reacts with both species.
    Long Read Sequencing Data Gca 004360235.1, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/long+read+sequencing+data+gca+004360235+1/pmc11919490-63-13-9
    Average 90 stars, based on 1 article reviews
    long-read sequencing data gca_004360235.1 - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "The unexpected loss of the ‘hunger hormone’ ghrelin in true passerines: a game changer in migration physiology"

    Article Title: The unexpected loss of the ‘hunger hormone’ ghrelin in true passerines: a game changer in migration physiology

    Journal: Royal Society Open Science

    doi: 10.1098/rsos.242107

    GHS-R abundance was measured using an enzyme immunoassay in plasma of the common quail and the garden warbler. Boxplot of the concentration values for GHS-R detected in plasma samples of the common quail and the garden warbler. Given the high homology of the GHS-R sequence within avian species, the chicken anti-GHS-R antibody was sensitive and cross-reacts with both species.
    Figure Legend Snippet: GHS-R abundance was measured using an enzyme immunoassay in plasma of the common quail and the garden warbler. Boxplot of the concentration values for GHS-R detected in plasma samples of the common quail and the garden warbler. Given the high homology of the GHS-R sequence within avian species, the chicken anti-GHS-R antibody was sensitive and cross-reacts with both species.

    Techniques Used: Enzyme-linked Immunosorbent Assay, Clinical Proteomics, Concentration Assay, Sequencing

    Related Articles

    Generated:

    Article Title: The unexpected loss of the ‘hunger hormone’ ghrelin in true passerines: a game changer in migration physiology
    Article Snippet: .. Furthermore, our blast search also included genomes generated with Oxford Nanopore Technologies’ long-read sequencing data (e.g. GCA_004360235.1), which show no GC-bias [ ], and genomes generated with Pacific Biosciences (PacBio) long-read sequencing data (e.g. GCA_009819655.1), which show less GC-bias than Illumina-based sequencing methods (e.g. [ ]); however, negative effects of GC content have been found in [ ]. ..

    Sequencing:

    Article Title: The unexpected loss of the ‘hunger hormone’ ghrelin in true passerines: a game changer in migration physiology
    Article Snippet: .. Furthermore, our blast search also included genomes generated with Oxford Nanopore Technologies’ long-read sequencing data (e.g. GCA_004360235.1), which show no GC-bias [ ], and genomes generated with Pacific Biosciences (PacBio) long-read sequencing data (e.g. GCA_009819655.1), which show less GC-bias than Illumina-based sequencing methods (e.g. [ ]); however, negative effects of GC content have been found in [ ]. ..



    Similar Products

    long read sequencing data  (Pacific Biosciences)
    86
    Pacific Biosciences long read sequencing data
    Long Read Sequencing Data, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/sequencing/pmc12918764-51-21-26
    Average 86 stars, based on 1 article reviews
    long read sequencing data - by Bioz Stars, 2026-11
    86/100 stars
    		  Buy from Supplier
    sequencing data long read  (Pacific Biosciences)
    86
    Pacific Biosciences sequencing data long read
    Sequencing Data Long Read, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/long+read+sequencing/pm41099697-115-9-18
    Average 86 stars, based on 1 article reviews
    sequencing data long read - by Bioz Stars, 2026-11
    86/100 stars
    		  Buy from Supplier
    data long read ont sequencing fastq files ncbi s  (TaKaRa)
    99
    TaKaRa data long read ont sequencing fastq files ncbi s
    Data Long Read Ont Sequencing Fastq Files Ncbi S, supplied by TaKaRa, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/TB+Green+Premix+Ex+Taq+II/pm40913764-230-206-203
    Average 99 stars, based on 1 article reviews
    data long read ont sequencing fastq files ncbi s - by Bioz Stars, 2026-11
    99/100 stars
    		  Buy from Supplier
    long-read pacific biosciences high-fidelity (hifi) sequencing data  (Pacific Biosciences)
    90
    Pacific Biosciences long-read pacific biosciences high-fidelity (hifi) sequencing data
    A. Example IGV views of a germline and postzygotic mutation in <t>HiFi</t> read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.
    Long Read Pacific Biosciences High Fidelity (Hifi) Sequencing Data, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/pacbio+rs+ii/bio_rxiv__2025__07__18__665621-22-5-3
    Average 90 stars, based on 1 article reviews
    long-read pacific biosciences high-fidelity (hifi) sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    long read rna-sequencing data  (Oxford Nanopore)
    90
    Oxford Nanopore long read rna-sequencing data
    A. Example IGV views of a germline and postzygotic mutation in <t>HiFi</t> read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.
    Long Read Rna Sequencing Data, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/rna+sequencing/pmc11387194__41588_2024_1872_MOESM1_ESM-266-0-0
    Average 90 stars, based on 1 article reviews
    long read rna-sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    whole-genome long-read nanopore sequencing data  (AQUAGEN LTD)
    90
    AQUAGEN LTD whole-genome long-read nanopore sequencing data
    A. Example IGV views of a germline and postzygotic mutation in <t>HiFi</t> read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.
    Whole Genome Long Read Nanopore Sequencing Data, supplied by AQUAGEN LTD, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/whole+genome+long+read+nanopore+sequencing+data/pm40646468-246-29-52
    Average 90 stars, based on 1 article reviews
    whole-genome long-read nanopore sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    long-read sequencing data  (Pacific Biosciences)
    90
    Pacific Biosciences long-read sequencing data
    A. Example IGV views of a germline and postzygotic mutation in <t>HiFi</t> read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.
    Long Read Sequencing Data, supplied by Pacific Biosciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/long+read+sequencing+data/bio_rxiv__2025__06__16__659880-174-4-1
    Average 90 stars, based on 1 article reviews
    long-read sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    long-read sequencing data  (Oxford Nanopore)
    90
    Oxford Nanopore long-read sequencing data
    A. Example IGV views of a germline and postzygotic mutation in <t>HiFi</t> read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.
    Long Read Sequencing Data, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/long+read+sequencing/bio_rxiv__2025__05__23__655769-226-2-14
    Average 90 stars, based on 1 article reviews
    long-read sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier
    oxford nanopore long-read sequencing data  (Oxford Nanopore)
    90
    Oxford Nanopore oxford nanopore long-read sequencing data
    Encoding of example deletions by different <t>sequencing</t> methods. Deletion of chr12 121,792,102–121,792,155 could be detected correctly by all sequencing methods ( A ). Deletion of chr5, 114,989,663–114,999,300 could be detected correctly only by long-read sequencing methods ( B ). Values in brackets represent scores predicted by ConsensuSV-ONT, but only for long-read sequencing.
    Oxford Nanopore Long Read Sequencing Data, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/long-read+sequencing+data/oxford+nanopore+sequencing/pmc12085603-32-30-27
    Average 90 stars, based on 1 article reviews
    oxford nanopore long-read sequencing data - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    A. Example IGV views of a germline and postzygotic mutation in HiFi read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.

    Journal: bioRxiv

    Article Title: Long-read sequencing of trios reveals increased germline and postzygotic mutation rates in repetitive DNA

    doi: 10.1101/2025.07.18.665621

    Figure Lengend Snippet: A. Example IGV views of a germline and postzygotic mutation in HiFi read data. B. The number of autosomal de novo germline and postzygotic SNVs, insertions and deletions <50 bp, and tandem repeat mutations observed in each sample. Sibling pairs are grouped by family and highlighted in blue, with the proband above the sibling. C. Upset plot of origin assignment shows concordance between HiFi haplotypes, ONT haplotypes, and allele balance. D. Allele balance distribution for autosomal germline and postzygotic SNVs across PacBio HiFi, Illumina, and ONT read data. E. Distribution of the size of autosomal insertions, deletions, and tandem repeat mutations.

    Article Snippet: We leveraged long-read Pacific Biosciences high-fidelity (HiFi) sequencing data derived from blood for variant discovery, and both long-read Oxford Nanopore Technologies (ONT) and short-read Illumina data for validation purposes.

    Techniques: Mutagenesis

    Encoding of example deletions by different sequencing methods. Deletion of chr12 121,792,102–121,792,155 could be detected correctly by all sequencing methods ( A ). Deletion of chr5, 114,989,663–114,999,300 could be detected correctly only by long-read sequencing methods ( B ). Values in brackets represent scores predicted by ConsensuSV-ONT, but only for long-read sequencing.

    Journal: Scientific Reports

    Article Title: ConsensuSV-ONT – A modern method for accurate structural variant calling

    doi: 10.1038/s41598-025-01486-1

    Figure Lengend Snippet: Encoding of example deletions by different sequencing methods. Deletion of chr12 121,792,102–121,792,155 could be detected correctly by all sequencing methods ( A ). Deletion of chr5, 114,989,663–114,999,300 could be detected correctly only by long-read sequencing methods ( B ). Values in brackets represent scores predicted by ConsensuSV-ONT, but only for long-read sequencing.

    Article Snippet: The solution is complete in its form and is ready to use not only by computer scientists but accessible and easy to use for everyone working with Oxford Nanopore long-read sequencing data.

    Techniques: Sequencing

    Encoding of merged mutation by different sequencing methods.

    Journal: Scientific Reports

    Article Title: ConsensuSV-ONT – A modern method for accurate structural variant calling

    doi: 10.1038/s41598-025-01486-1

    Figure Lengend Snippet: Encoding of merged mutation by different sequencing methods.

    Article Snippet: The solution is complete in its form and is ready to use not only by computer scientists but accessible and easy to use for everyone working with Oxford Nanopore long-read sequencing data.

    Techniques: Mutagenesis, Sequencing