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odyssey emsa buffer kit  (LI-COR)


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    Structured Review

    LI-COR odyssey emsa buffer kit
    Odyssey Emsa Buffer Kit, supplied by LI-COR, used in various techniques. Bioz Stars score: 98/100, based on 89 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/licor+intercept+blocking+buffer/ODYSSEY+EMSA+BUFFER+KIT/pmc04832313-92-13-17
    Average 98 stars, based on 89 article reviews
    odyssey emsa buffer kit - by Bioz Stars, 2026-10
    98/100 stars

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    Related Articles

    other:

    Article Title: TIPIN coordinates ATM-dependent checkpoint and NF-κB signaling to counteract DNA replication damage from topoisomerase inhibition.
    Article Snippet: Following three additional washes with PBS, coverslips were mounted onto glass microscope slides using VectaShield Antifade mounting medium containing DAPI (Vector Lab).

    Binding Assay:

    Article Title: Genetic regulation of the estrogen receptor and inherited predisposition to breast cancer.
    Article Snippet: Probe and competitor duplexes were annealed by mixing complementary oligonucleotides (IDT), heating 3 min at 95 °C and cooling gradually to room temperature. .. Binding reactions were performed with the Odyssey EMSA kit (LI- COR Biosciences) in binding buffer (10 mM Tris, 50 mM KCl, 1 mM DTT; pH 7.5), 2.5 mM DTT, 0.25% Tween- 20, 50 ng/μL Poly(dI·dC), and 2.5% glycerol with 5 μg nuclear extract and 2.5 nM labeled probe, and incubated for 20 min at room temperature. ..

    Article Title: HNF1B-MODY in the Norwegian MODY Registry and the Norwegian Childhood Diabetes Registry: Clinical insights and prevalence informed by genetic and functional evaluation
    Article Snippet: .. Optimal binding conditions were facilitated using the Odyssey EMSA Buffer Kit (LI-COR Biosciences #829-07910, Lincoln, NE, USA), and the resulting reactions were separated by gel electrophoresis, visualized with the ChemiDoc MP imaging system (Bio-Rad Laboratories), and quantitated in terms of signal strength relative to WT HNF-1B. .. HNF1B-specific variant interpretation guidelines have so far not been published by the ClinGen Monogenic Diabetes Expert Panel (MDEP).

    Labeling:

    Article Title: Genetic regulation of the estrogen receptor and inherited predisposition to breast cancer.
    Article Snippet: Probe and competitor duplexes were annealed by mixing complementary oligonucleotides (IDT), heating 3 min at 95 °C and cooling gradually to room temperature. .. Binding reactions were performed with the Odyssey EMSA kit (LI- COR Biosciences) in binding buffer (10 mM Tris, 50 mM KCl, 1 mM DTT; pH 7.5), 2.5 mM DTT, 0.25% Tween- 20, 50 ng/μL Poly(dI·dC), and 2.5% glycerol with 5 μg nuclear extract and 2.5 nM labeled probe, and incubated for 20 min at room temperature. ..

    Article Title: Cytoplasmic PXR regulates glucose metabolism by binding mRNAs and modulating their stability
    Article Snippet: .. The recombinant PXR proteins (Cusabio, CSB-EP016048HU), RNH1 proteins (Cusabio, CSB-EP019901HUb1) or synthesized peptides (GenScript) were incubated with 200 nM of labeled RNAs for 30 min at room temperature according to the guidelines of the Odyssey Infrared EMSA kit (LI-COR, 829-07910). .. Samples were loaded onto a nondenatured 1% NuSieve GTG agarose gel (Lonza, 50080) and separated by electrophoresis at 90 V for 45 min at 4 °C.

    Incubation:

    Article Title: Genetic regulation of the estrogen receptor and inherited predisposition to breast cancer.
    Article Snippet: Probe and competitor duplexes were annealed by mixing complementary oligonucleotides (IDT), heating 3 min at 95 °C and cooling gradually to room temperature. .. Binding reactions were performed with the Odyssey EMSA kit (LI- COR Biosciences) in binding buffer (10 mM Tris, 50 mM KCl, 1 mM DTT; pH 7.5), 2.5 mM DTT, 0.25% Tween- 20, 50 ng/μL Poly(dI·dC), and 2.5% glycerol with 5 μg nuclear extract and 2.5 nM labeled probe, and incubated for 20 min at room temperature. ..

    Article Title: Cytoplasmic PXR regulates glucose metabolism by binding mRNAs and modulating their stability
    Article Snippet: .. The recombinant PXR proteins (Cusabio, CSB-EP016048HU), RNH1 proteins (Cusabio, CSB-EP019901HUb1) or synthesized peptides (GenScript) were incubated with 200 nM of labeled RNAs for 30 min at room temperature according to the guidelines of the Odyssey Infrared EMSA kit (LI-COR, 829-07910). .. Samples were loaded onto a nondenatured 1% NuSieve GTG agarose gel (Lonza, 50080) and separated by electrophoresis at 90 V for 45 min at 4 °C.

    Article Title: Integrative characterization of MYC RNA-binding function
    Article Snippet: For MYC protein, at room temperature, the inclusion bodies in pellets were collected, dissolved into 30 mL of denaturing lysis buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 10 mM imidazole, 0.5% NP-40, 1 mM PMSF) overnight, clarified in 10,000 rpm, and incubated with 1 mL of HisPur Ni-NTA resin for 1 h. After five washes with washing buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 30 mM imidazole, 0.5% NP-40, 1 mM β-mercaptoethanol, 1 mM PMSF), recombinant His-MYC was eluted from HisPur Ni-NTA resin with 1 mL of elution buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 500 mM imidazole, 0.5% NP-40, 1 mM PMSF) and dialyzed in the Slide-A-Lyzer Dialysis Cassettes (ThermoFisher, 66380) against renaturation buffer (20 mM Tris-HCl pH 8.0, 500 mM KCl, 10% glycerol, 0.05% NP-40, 1 mM DTT, 0.2 mM PMSF) containing a gradient of urea from 4 M to 0 M for 2 h, respectively. .. A series of diluted recombinant MYC proteins and their derivatives were incubated with 200 nM of fluor-labeled RNA for 30 min at room temperature, following the guidelines of an Odyssey Infrared EMSA Kit (LI-COR, 829–07910). .. Samples were then loaded on a non-denature 1% NuSieve GTG agarose gel (Lonza, 50080) and electrophoresed for 45 min at 90 V in a 4°C cold room.

    Article Title: TIPIN coordinates ATM-dependent checkpoint and NF-κB signaling to counteract DNA replication damage from topoisomerase inhibition
    Article Snippet: Images were captured using an Eclipse Ts2R-FL inverted fluorescence microscope (Nikon) equipped with a Nikon DS-Qi2 digital camera. .. EMSA was performed as previously described using the Odyssey EMSA kit (LICORBio, 829-07910) in which nuclear extract is incubated with IRDye intrared dye end-labeled NF-κB consensus oligonucleotide (829-07924) . .. The reaction mixture was subjected to 4% native gel electrophoresis at 200 V, and the gel was imaged using LICOR Odyssey F imager (LICORBio).

    Nucleic Acid Electrophoresis:

    Article Title: HNF1B-MODY in the Norwegian MODY Registry and the Norwegian Childhood Diabetes Registry: Clinical insights and prevalence informed by genetic and functional evaluation
    Article Snippet: .. Optimal binding conditions were facilitated using the Odyssey EMSA Buffer Kit (LI-COR Biosciences #829-07910, Lincoln, NE, USA), and the resulting reactions were separated by gel electrophoresis, visualized with the ChemiDoc MP imaging system (Bio-Rad Laboratories), and quantitated in terms of signal strength relative to WT HNF-1B. .. HNF1B-specific variant interpretation guidelines have so far not been published by the ClinGen Monogenic Diabetes Expert Panel (MDEP).

    Imaging:

    Article Title: HNF1B-MODY in the Norwegian MODY Registry and the Norwegian Childhood Diabetes Registry: Clinical insights and prevalence informed by genetic and functional evaluation
    Article Snippet: .. Optimal binding conditions were facilitated using the Odyssey EMSA Buffer Kit (LI-COR Biosciences #829-07910, Lincoln, NE, USA), and the resulting reactions were separated by gel electrophoresis, visualized with the ChemiDoc MP imaging system (Bio-Rad Laboratories), and quantitated in terms of signal strength relative to WT HNF-1B. .. HNF1B-specific variant interpretation guidelines have so far not been published by the ClinGen Monogenic Diabetes Expert Panel (MDEP).

    Recombinant:

    Article Title: Cytoplasmic PXR regulates glucose metabolism by binding mRNAs and modulating their stability
    Article Snippet: .. The recombinant PXR proteins (Cusabio, CSB-EP016048HU), RNH1 proteins (Cusabio, CSB-EP019901HUb1) or synthesized peptides (GenScript) were incubated with 200 nM of labeled RNAs for 30 min at room temperature according to the guidelines of the Odyssey Infrared EMSA kit (LI-COR, 829-07910). .. Samples were loaded onto a nondenatured 1% NuSieve GTG agarose gel (Lonza, 50080) and separated by electrophoresis at 90 V for 45 min at 4 °C.

    Article Title: Integrative characterization of MYC RNA-binding function
    Article Snippet: For MYC protein, at room temperature, the inclusion bodies in pellets were collected, dissolved into 30 mL of denaturing lysis buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 10 mM imidazole, 0.5% NP-40, 1 mM PMSF) overnight, clarified in 10,000 rpm, and incubated with 1 mL of HisPur Ni-NTA resin for 1 h. After five washes with washing buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 30 mM imidazole, 0.5% NP-40, 1 mM β-mercaptoethanol, 1 mM PMSF), recombinant His-MYC was eluted from HisPur Ni-NTA resin with 1 mL of elution buffer (20 mM Tris-HCl pH 8.0, 8 M urea, 500 mM NaCl, 500 mM imidazole, 0.5% NP-40, 1 mM PMSF) and dialyzed in the Slide-A-Lyzer Dialysis Cassettes (ThermoFisher, 66380) against renaturation buffer (20 mM Tris-HCl pH 8.0, 500 mM KCl, 10% glycerol, 0.05% NP-40, 1 mM DTT, 0.2 mM PMSF) containing a gradient of urea from 4 M to 0 M for 2 h, respectively. .. A series of diluted recombinant MYC proteins and their derivatives were incubated with 200 nM of fluor-labeled RNA for 30 min at room temperature, following the guidelines of an Odyssey Infrared EMSA Kit (LI-COR, 829–07910). .. Samples were then loaded on a non-denature 1% NuSieve GTG agarose gel (Lonza, 50080) and electrophoresed for 45 min at 90 V in a 4°C cold room.

    Synthesized:

    Article Title: Cytoplasmic PXR regulates glucose metabolism by binding mRNAs and modulating their stability
    Article Snippet: .. The recombinant PXR proteins (Cusabio, CSB-EP016048HU), RNH1 proteins (Cusabio, CSB-EP019901HUb1) or synthesized peptides (GenScript) were incubated with 200 nM of labeled RNAs for 30 min at room temperature according to the guidelines of the Odyssey Infrared EMSA kit (LI-COR, 829-07910). .. Samples were loaded onto a nondenatured 1% NuSieve GTG agarose gel (Lonza, 50080) and separated by electrophoresis at 90 V for 45 min at 4 °C.



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