markus seeliger (Addgene inc)
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Markus Seeliger, supplied by Addgene inc, used in various techniques. Bioz Stars score: 94/100, based on 24 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/lambda+phosphatase/Lambda+Phosphatase+(Plasmid+%2379748)/pm40997810-350-13-15
Average 94 stars, based on 24 article reviews
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Plasmid Preparation:Article Title: A Leishmania virulence factor harnesses an allosteric kinase switch to regulate its ubiquitin ligase activity. Article Snippet: All amino acid sequences were manually inspected by sequence alignments (MAFFT L-INS-I; v. 7.271 100 ) and InterProScan 102 to ascertain that both a kinase and a HECT domain were present. (ii) To expand the search for divergent homologues, the initial alignment was used to build an HMM profile and perform an HMM search using HMMER 3.1b2 103 against Eukprot3, 104 a comprehensive database of predicted proteins from genomes and transcriptomes representing most eukaryotic lineages. .. 86,109 The λ-phosphatase plasmid was a gift from John Chodera, Nicholas Levinson, and Article Title: Dual-specificity mitogen-activated protein kinase kinases can use ADP to phosphorylate MAP kinases in vitro Article Snippet: .. Article Title: The N-Myc MB0-MBI region interacts specifically and dynamically with the N-lobe of Aurora kinase A. Article Snippet: The 6x-His and solubility tag was cleaved with SENP2 during dialysis at 4 °C overnight and the protein was purified through incubation with Ni-NTA resin before the final polishing step by a HiLoad 16/600 Superdex 75 column (Cytiva) using GF buffer (50mM Tris-HCl pH 7.5, 150mM NaCl, 10% glycerol and 10mM β-mercaptoethanol). .. Unphosphorylated AurA122-403 with mutations C290A:C393A was produced by Article Title: Phosphorylation modulates secondary structure of intrinsically disorder regions in RNA polymerase II Article Snippet: .. BL21 (DE3) cells were cotransformed with plasmids containing the kinase domain of human Dyrk1a (Addgene Plasmid #79690) and the Article Title: PP2A and CDK16 antagonistically regulate WIPI2B phosphorylation and neuronal autophagosome biogenesis Article Snippet: .. Protein expression was accomplished by transforming this plasmid along with a second other:Article Title: Phosphorylation modulates secondary structure of intrinsically disorder regions in RNA polymerase II. Article Snippet: pET His6 MBP TEV LIC cloning vector (1M) was a gift from Software:Article Title: A Leishmania virulence factor harnesses an allosteric kinase switch to regulate its ubiquitin ligase activity. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER amylose magnetic beads NEB Cat#E8035S Dynabeads Protein G Invitrogen Cat#10004D Dynabeads Protein A Invitrogen Cat#10002D BS3 (bis(sulfosuccinimidyl)suberate) Thermo Fisher Scientific Cat#A39266 Q5 polymerase NEB Cat#M0491L XtremeGENE HP Sigma Aldrich Cat#06366236001 cOmpleteTM, EDTA-free Protease Inhibitor Cocktail Roche Cat#11873580001 IRDye® 800CW Maleimide LI-COR Cat#929-80020 Morpheus® HT-96 Molecular Dimensions Cat#MD1-47 NativeMark unstained protein standard Invitrogen Cat#11574986 PageRuler plus prestained protein marker Invitrogen Cat#26620 Critical commercial assays SulfoLink kit Thermo Scientific Cat#44999 mNG-Trap Magnetic Agarose Chromotek Cat#ntma Deposited data TKUL KD crystal structure This study PDB: 9GMP IP MS datasets This study Pride: PXD053520 HDX-MS datasets This study Pride: PXD057190 in vitro phospho-MS dataset This study Pride: PXD056904 unprocessed and uncompressed data from Figures 1, 2, 3, 4, 5, 6, 7 and S1–S8, and source data for all graphs This study Mendeley Data: https://doi.org/ 10.17632/528bhp8sgc.1 Experimental models: Organisms/strains L. mexicana MNYC/BZ/62/M379 Sigrid Roberts (Forest Grove, OR, USA); Roberts et al. 83 MNYC/BZ/62/M379 L. mexicana MNYC/BZ/62/M379 Cas9 This study N/A L. mexicana MNYC/BZ/62/M379 ΔTKUL This study N/A L. mexicana MNYC/BZ/62/M379 ΔTKUL + TKUL This study N/A L. mexicana MNYC/BZ/62/M379 ΔTKUL + TKUL K756A This study N/A L. mexicana MNYC/BZ/62/M379 ΔTKUL + TKUL C1392A This study N/A L. mexicana MNYC/BZ/62/M379 TKUL::mNG This study N/A mouse: C57BL/6N mice Charles River Laboratories C57BL/6N Spodoptera frugiperda Sf9 ATCC Cat#CRL-1711 Spodoptera frugiperda Sf21 (IPLB-Sf-21-AE) Oxford Expression Technologies Cat#600105 Trichopulsia Ni Hi5 Invitrogen Cat#10747474 Oligonucleotides table of primers used in this study This study Table S5 Recombinant DNA 4C-His-MBP-TKUL-FL This study N/A 4C-His-MBP-TKUL-ΔN89 This study N/A 4C-His-MBP-TKUL-ΔN119 This study N/A 4C-His-MBP-TKUL-ΔTPR This study N/A 4C-His-MBP-TKUL-FL-K756A This study N/A 4C-His-MBP-TKUL-ΔTPR-K756A This study N/A 4C-His-MBP-TKUL-FL-C1392A This study N/A 4C-His-MBP-TKUL-ΔTPR-C1392A This study N/A 4C-His-MBP-TKUL-FL-T881A This study N/A 4C-His-MBP-TKUL-FL-T883A This study N/A 4C-His-MBP-TKUL-FL-T884A This study N/A (Continued on next page) e2 Molecular Cell 85, 3711–3728.e1–e11, October 2, 2025 .. REAGENT or RESOURCE SOURCE IDENTIFIER 4C-His-MBP-TKUL-FL-3TA This study N/A 4C-His-MBP-TKUL-FL-3TE This study N/A 4C-His-MBP-TKUL-FL-S93P This study N/A 4C-His-MBP-TKUL-FL-W104D This study N/A 4C-His-MBP-TKUL-FL-E108A This study N/A 4C-His-MBP-TKUL-FL-Q109A This study N/A 4C-His-MBP-TKUL-FL-S1046Y This study N/A pGEX-6P3-GST-TKUL-KUL This study N/A pGEX-6P3-GST-TKUL-KD This study N/A pGEX-6P3-GST-TKUL-KD-crystal This study N/A pCCA1-His-SUMO-TKUL-HECT This study N/A pGEX-6P3-GST-LmHSP70 This study N/A pGEX-6P3-GST-LmHSP70-ΔC This study N/A pCCA1-His-SUMO-LmUBE2D This study N/A pCCA1-His-SUMO-LmUBE2D-K91R This study N/A pCCA1-His-SUMO-LmHSP40 This study N/A pCCA1-His-SUMO-HsUBE2D2 This study N/A pDS56-His-luciferase Morá n Luengo et al. 84 Article Title: CaMKII monomers are sufficient for GluN2B binding, co-condensation, and synaptic potentiation. Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines Primary rat hippocampal cultures Laboratory of K. Ulrich Bayer N/A HEK293T cells ATCC CRL-3216 Experimental models: Organisms/strains GluN2B LA/RQ mice (C57BL/6J) Laboratory of Johannes Hell, Halt et al.9 N/A Recombinant DNA PSD95-FingR-GFP Laboratory of Don Arnold, Gross et al.47 Addgene #46295 pMH-Halo tag (‘‘HaloFill’’) Michael Huen Addgene #154144 CaMKIIα shRNA Laboratory of K. Ulrich Bayer, Barcomb et al.46 N/A pNES-iRFP-C1 Goulden et al.63 pNES-iRFP-C1, Addgene #116863 pmTurquoise2-T2A-Venus(L68V) Goedhart et al.32 pmTurquoise2-T2A-Venus(L68V), Addgene #60494 GFP-C1-CaMKIIα Shen et al.64 GFP-C1-CAMKIIalpha, Addgene #21226 Cry2olig Taslimi et al.34 N/A CIBN-mCherry-CaMKIIα Taslimi et al.34 N/A CMV-pDisplay-Halo Tobias et al.65 CMV-pDisplay-Halo, Addgene #223497 Signal-mCherry-TM(pDisplay)-GluN2B Made in house N/A mScarlet GluN2B (soluble) Made in house, Rumian et al.7 N/A GST-GluN2Bc Made in house, Bayer et al.8 N/A 6xHis-SUMO-CaMKIIα (6HS-CaMKII) Ozden et al.16 N/A λ phosphatase Albanese et al.66 Recombinant:Article Title: CaMKII monomers are sufficient for GluN2B binding, co-condensation, and synaptic potentiation. Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines Primary rat hippocampal cultures Laboratory of K. Ulrich Bayer N/A HEK293T cells ATCC CRL-3216 Experimental models: Organisms/strains GluN2B LA/RQ mice (C57BL/6J) Laboratory of Johannes Hell, Halt et al.9 N/A Recombinant DNA PSD95-FingR-GFP Laboratory of Don Arnold, Gross et al.47 Addgene #46295 pMH-Halo tag (‘‘HaloFill’’) Michael Huen Addgene #154144 CaMKIIα shRNA Laboratory of K. Ulrich Bayer, Barcomb et al.46 N/A pNES-iRFP-C1 Goulden et al.63 pNES-iRFP-C1, Addgene #116863 pmTurquoise2-T2A-Venus(L68V) Goedhart et al.32 pmTurquoise2-T2A-Venus(L68V), Addgene #60494 GFP-C1-CaMKIIα Shen et al.64 GFP-C1-CAMKIIalpha, Addgene #21226 Cry2olig Taslimi et al.34 N/A CIBN-mCherry-CaMKIIα Taslimi et al.34 N/A CMV-pDisplay-Halo Tobias et al.65 CMV-pDisplay-Halo, Addgene #223497 Signal-mCherry-TM(pDisplay)-GluN2B Made in house N/A mScarlet GluN2B (soluble) Made in house, Rumian et al.7 N/A GST-GluN2Bc Made in house, Bayer et al.8 N/A 6xHis-SUMO-CaMKIIα (6HS-CaMKII) Ozden et al.16 N/A λ phosphatase Albanese et al.66 shRNA:Article Title: CaMKII monomers are sufficient for GluN2B binding, co-condensation, and synaptic potentiation. Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines Primary rat hippocampal cultures Laboratory of K. Ulrich Bayer N/A HEK293T cells ATCC CRL-3216 Experimental models: Organisms/strains GluN2B LA/RQ mice (C57BL/6J) Laboratory of Johannes Hell, Halt et al.9 N/A Recombinant DNA PSD95-FingR-GFP Laboratory of Don Arnold, Gross et al.47 Addgene #46295 pMH-Halo tag (‘‘HaloFill’’) Michael Huen Addgene #154144 CaMKIIα shRNA Laboratory of K. Ulrich Bayer, Barcomb et al.46 N/A pNES-iRFP-C1 Goulden et al.63 pNES-iRFP-C1, Addgene #116863 pmTurquoise2-T2A-Venus(L68V) Goedhart et al.32 pmTurquoise2-T2A-Venus(L68V), Addgene #60494 GFP-C1-CaMKIIα Shen et al.64 GFP-C1-CAMKIIalpha, Addgene #21226 Cry2olig Taslimi et al.34 N/A CIBN-mCherry-CaMKIIα Taslimi et al.34 N/A CMV-pDisplay-Halo Tobias et al.65 CMV-pDisplay-Halo, Addgene #223497 Signal-mCherry-TM(pDisplay)-GluN2B Made in house N/A mScarlet GluN2B (soluble) Made in house, Rumian et al.7 N/A GST-GluN2Bc Made in house, Bayer et al.8 N/A 6xHis-SUMO-CaMKIIα (6HS-CaMKII) Ozden et al.16 N/A λ phosphatase Albanese et al.66 Produced:Article Title: The N-Myc MB0-MBI region interacts specifically and dynamically with the N-lobe of Aurora kinase A. Article Snippet: The 6x-His and solubility tag was cleaved with SENP2 during dialysis at 4 °C overnight and the protein was purified through incubation with Ni-NTA resin before the final polishing step by a HiLoad 16/600 Superdex 75 column (Cytiva) using GF buffer (50mM Tris-HCl pH 7.5, 150mM NaCl, 10% glycerol and 10mM β-mercaptoethanol). .. Unphosphorylated AurA122-403 with mutations C290A:C393A was produced by Expressing:Article Title: PP2A and CDK16 antagonistically regulate WIPI2B phosphorylation and neuronal autophagosome biogenesis Article Snippet: .. Protein expression was accomplished by transforming this plasmid along with a second |
