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MetaCell Inc k-nn graph-based metacell algorithm
K Nn Graph Based Metacell Algorithm, supplied by MetaCell Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/k-nn+algorithm/metacell++mc++algorithm/pm39348410-303-9-11
Average 90 stars, based on 1 article reviews
k-nn graph-based metacell algorithm - by Bioz Stars, 2026-09
90/100 stars

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Article Title: mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis
Article Snippet: Developed by the same authors as MetaCell, MetaCell2 is designed for faster performance through divide-and-conquer.

Article Title: BootCellNet, a resampling-based procedure, promotes unsupervised identification of cell populations via robust inference of gene regulatory networks
Article Snippet: One can also use different smoothing methods, such as k -NN graph-based MetaCell algorithm[ ], or data imputation methods such as MAGIC[ ] and DeepImpute[ ].

Article Title: Temporal BMP4 effects on mouse embryonic and extraembryonic development.
Article Snippet: Estimated developmental time (Et) over ExE age groups (middle panel) and number of cells per ExE age group (right panel). e Metacell-metacell distance matrix across ExE metacells.

Article Title: BootCellNet, a resampling-based procedure, promotes unsupervised identification of cell populations via robust inference of gene regulatory networks.
Article Snippet: One can also use different smoothing methods, such as k-NN graph-based MetaCell algorithm[35], or data imputation methods such as MAGIC[36] and DeepImpute[37].

Article Title: Temporal BMP4 effects on mouse embryonic and extraembryonic development
Article Snippet: Given a temporal order of embryos from the WT atlas, query embryos were assigned a best-matching WT rank as previously reported , : using the joint metacell k -nearest neighbours similarity graph of query cells and atlas cells, each query cell is annotated with the temporal rank of the nearest neighbour atlas cell (that is, the temporal rank of the embryo this cell belongs to).

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Article Title: Dissection of the immune landscape in psoriatic arthritis defines immunoproteasome up-regulation in treatment resistance.
Article Snippet: Despite substantial advancements in psoriatic arthritis (PsA) treatment modalities, a considerable proportion of patients continue to experience persistent joint inflammation, unresponsive to the armamentarium of diseasemodifying antirheumatic drugs.. Identifying previously unknown biomarkers and targets for refractory disease is urgently needed.. Here, using singlecell RNA sequencing of synovial fluid from 41 patients with PsA and 9 osteoarthritis (OA) controls, we mapped the immune landscape of the pathogenic synovial fluid in patients with PsA.



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