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InterPro Inc interproscan
Overview of data files and data sets produced in this study, with information on data repository.

Interproscan, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/interproscan+software+package/interproscan/pmc10224929-156-6-17
Average 90 stars, based on 1 article reviews

interproscan - by Bioz Stars, 2026-11

90/100 stars

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1) Product Images from "De novo transcriptome assembly and annotation for gene discovery in Salamandra salamandra at the larval stage"

Article Title: De novo transcriptome assembly and annotation for gene discovery in Salamandra salamandra at the larval stage

Journal: Scientific Data

doi: 10.1038/s41597-023-02217-9

Figure Legend Snippet: Overview of data files and data sets produced in this study, with information on data repository.

Techniques Used: Produced, Functional Assay

other:

Article Title: Beyond protein functions: evaluating completeness, coherence, and consistency of genome-scale function annotations
Article Snippet: InterProScan maps to GO through curated InterPro-to-GO mappings ( ).

Article Title: Supporting Information for Genome of Halimeda opuntia reveals differentiation of subgenomes and molecular bases of multinucleation and calcification in algae
Article Snippet: Zdobnov EM & Apweiler R (2001) InterProScan--an integration platform for the signaturerecognition methods in InterPro.

Article Title: Mechanistic Insights into Keratin Degradation by Onygena corvina
Article Snippet: The InterPro Scan annotation includes the entry name and accession number, representing a protein superfamily, family, domain or repeat.

Article Title: Analyses of a chromosome-scale genome assembly reveal the origin and evolution of cultivated chrysanthemum
Article Snippet: Protein domains were annotated by searching against the InterPro ((http://www.ebi.ac.uk/interpro/, version 32.0) and Pfam (http://pfam.xfam.org/, version 27.0) databases, using InterProScan (version 4.8) and HMMER (http://www.hmmer.org/, version 3.1), respectively32-35.

Article Title: Analyses of a chromosome-scale genome assembly reveal the origin and evolution of cultivated chrysanthemum
Article Snippet: Zdobnov, E.M. & Apweiler, R. InterProScan–an integration platform for the signature- recognition methods in InterPro.

Article Title: Mechanistic Insights into Keratin Degradation by Onygena corvina
Article Snippet: Functional annotation of the detected proteins was then refined using InterPro Scan( ) version 5.73-104.0 and the MEROPS database( ).

Derivative Assay:

Article Title: A high-quality chromosome-scale genome assembly of Xingan mandarin ( Citrus reticulata ‘Xingan’), a primitive Mandarin type
Article Snippet: .. Protein domains were annotated using InterProScan (v5.34-73.0) , derived from InterPro protein databases. ..

Functional Assay:

Article Title: Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
Article Snippet: .. The functional classification of GO categories and InterPro entries was performed using InterProScan (version 5.39-77.0) [42]. ..

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