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InterPro Inc interproscan sequence search
Interproscan Sequence Search, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/interpro+sequence+search/interproscan+sequence+search/pmc04401260-116-1-8
Average 90 stars, based on 1 article reviews
interproscan sequence search - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

Sequencing:

Article Title: Characterization and diagnostic marker development for Yr28-rga1 conferring stripe rust resistance in wheat
Article Snippet: Stripe rust is one of the most devastating wheat diseases and developing resistant cultivars is the most economical way to manage this disease.. More than 80 stripe rust resistance genes (Yr genes) have formally been mapped.. However, a lack of diagnostic markers has partially restricted the deployment of some resistance genes in molecular breeding.

Article Title: Cellular Growth and Mitochondrial Ultrastructure of Leishmania ( Viannia ) braziliensis Promastigotes Are Affected by the Iron Chelator 2,2-Dipyridyl
Article Snippet: .. Proteins identified as hypothetical and therefore of unknown function were analyzed using InterProScan Sequence Search Tool ( http://www.ebi.ac.uk/Tools/pfa/iprscan/ ) from the InterPro data library ( http://www.ebi.ac.uk/Interpro/ ) to assign predicted functional domains . ..

other:

Article Title: Protannotator: a semiautomated pipeline for chromosome-wise functional annotation of the "missing" human proteome.
Article Snippet: The chromosome-centric human proteome project (CHPP) aims to define the complete set of proteins encoded in each human chromosome.. The neXtProt database (September 2013) lists 20 128 proteins for the human proteome, of which 3831 human proteins (∼19%) are considered “missing” according to the standard metrics table (released September 27, 2013).. In support of the C-HPP initiative, we have extended the annotation strategy developed for human chromosome 7 “missing” proteins into a semiautomated pipeline to functionally annotate the “missing” human proteome.

Functional Assay:

Article Title: Cellular Growth and Mitochondrial Ultrastructure of Leishmania ( Viannia ) braziliensis Promastigotes Are Affected by the Iron Chelator 2,2-Dipyridyl
Article Snippet: .. Proteins identified as hypothetical and therefore of unknown function were analyzed using InterProScan Sequence Search Tool ( http://www.ebi.ac.uk/Tools/pfa/iprscan/ ) from the InterPro data library ( http://www.ebi.ac.uk/Interpro/ ) to assign predicted functional domains . ..

Derivative Assay:

Article Title: The field of protein function prediction as viewed by different domain scientists
Article Snippet: The answers included PSI-BLAST ( Altschul et al. , 1997 ), InterPro ( Blum et al. , 2021 ), HHpred ( Zimmermann et al. , 2018 ), STRING ( Szklarczyk et al. , 2021 ), Swiss-Prot ( ) and I-TASSER ( Roy et al. , 2010 ). .. Of these, PSI-BLAST, InterPro via InterProScan, HHpred and I-TASSER can be considered tools that help understanding of protein function, whereas STRING and Swiss-Prot are databases that provide computational predictions derived from experimental annotations. ..



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