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imaging studio software  (LI-COR)


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    Structured Review

    LI-COR imaging studio software
    Imaging Studio Software, supplied by LI-COR, used in various techniques. Bioz Stars score: 98/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/image+analysis+computer+software/Odyssey+CLx+Image+Studio+Analysis+Software+-+Small+Animal+Imaging+Add-On/pm36510024-546-11-16
    Average 98 stars, based on 7 article reviews
    imaging studio software - by Bioz Stars, 2026-11
    98/100 stars

    Images

    Related Articles

    Transcranial Magnetic Stimulation:

    Article Title: Type II kinase inhibitors that target Parkinson’s disease–associated LRRK2
    Article Snippet: Following incubation, membranes were washed three times with 1× TBS-T [20 mM tris (pH 8.0), 150 mM NaCl, and 0.1% Tween 20] before incubation with IRDye 680RD goat anti-rabbit IgG (LI-COR, 926-68071; RRID: AB_10956166) and IRDye 800CW goat anti-mouse IgG (LI-COR, 926-32210; RRID: AB_621842) secondary antibodies in 5% milk in 1× TBS for 1 hour at room temperature. .. Membranes were then washed three times in 1× TBS-T before imaging on Li-COR Odyssey CLx controlled by Imaging Studio software ( www.licorbio.com/image-studio , RRID:SCR_015795). .. Image processing and quantification were performed in ImageJ version 2.14.0 (National Institutes of Health; https://imagej.net/ , RRID:SCR_003070).

    Imaging:

    Article Title: Type II kinase inhibitors that target Parkinson’s disease–associated LRRK2
    Article Snippet: Following incubation, membranes were washed three times with 1× TBS-T [20 mM tris (pH 8.0), 150 mM NaCl, and 0.1% Tween 20] before incubation with IRDye 680RD goat anti-rabbit IgG (LI-COR, 926-68071; RRID: AB_10956166) and IRDye 800CW goat anti-mouse IgG (LI-COR, 926-32210; RRID: AB_621842) secondary antibodies in 5% milk in 1× TBS for 1 hour at room temperature. .. Membranes were then washed three times in 1× TBS-T before imaging on Li-COR Odyssey CLx controlled by Imaging Studio software ( www.licorbio.com/image-studio , RRID:SCR_015795). .. Image processing and quantification were performed in ImageJ version 2.14.0 (National Institutes of Health; https://imagej.net/ , RRID:SCR_003070).

    Article Title: Structural basis for Parkinson’s disease-linked LRRK2’s binding to microtubules
    Article Snippet: .. For quantification, blots were imaged on an Odyssey CLx controlled by Imaging Studio software (version 5.2, https://www.licor.com/bio/image-studio/ , RRID: SCR_015795 ), and intensity of bands quantified using Image Studio Lite software (version 5.2, RRID: SCR_013715 ). ..

    Article Title: Cognitive impairments in a Down syndrome model with abnormal hippocampal and prefrontal dynamics and cytoarchitecture
    Article Snippet: After blocking, membranes were washed 3 times (10 min each) in PBST (0.05% Tween in PBS) and incubated for 1 h with the pertinent IRDye-secondary antibody (LI-COR Biosciences) diluted in blocking buffer. .. Finally, membranes were washed twice with PBST and once with PBS for 10 min. Antibody binding was visualised by Odyssey® CLx Imaging System (LI-COR Biosciences) and Image Studio LiteTM Software (LI-COR Biosciences, version 5.2.5) was used for protein quantification. ..

    Article Title: Novel read through agent: ZKN-0013 demonstrates efficacy in APC min model of familial adenomatous polyposis.
    Article Snippet: Familial adenomatous polyposis (FAP) is a precancerous, colorectal disease characterized by hundreds to thousands of adenomatous polyps caused by mutations in the tumor suppressor gene adenomatous polyposis coli (APC).. Approximately 30% of these mutations are premature termination codons (PTC), resulting in the production of a truncated, dysfunctional APC protein.. Consequently, the β-catenin degradation complex fails to form in the cytoplasm, leading to elevated nuclear levels of β-catenin and unregulated β-catenin/wnt-pathway signaling.

    Article Title: Regulatory T cells use heparanase to access IL-2 bound to extracellular matrix in inflamed tissue.
    Article Snippet: Proteins were transferred to nitrocellulose membranes and immunoblotted with primary antibodies against murine HPSE (rabbit polyclonal antibody PAA711Mu04, Cloud-Clone Corp.), human HPSE (mouse monoclonal antibody cloneHP3/17, ProSpec), human/murineβ-actin (mouse monoclonal antibody CAB340Hu22, Cloud-Clone) and murine GAPDH (mouse monoclonal antibody 6C5, EMD Millipore) and subsequently DyLight-680 or DyLight800-conjugated secondary antibodies (Supplementary Table 2). .. Antibody binding was visualized and quantified using andOdyssey Imaging systemand ImageStudio software (Li-Cor). ..

    Article Title: Structural basis for Parkinson's disease-linked LRRK2's binding to microtubules.
    Article Snippet: .. For quantification, blots were imaged on an Odyssey CLx controlled by Imaging Studio software (version 5.2, https://www.licor.com/bio/image-studio/, RRID: SCR_015795), and intensity of bands quantified using Image Studio Lite software (version 5.2, RRID: SCR_013715). ..

    Software:

    Article Title: Type II kinase inhibitors that target Parkinson’s disease–associated LRRK2
    Article Snippet: Following incubation, membranes were washed three times with 1× TBS-T [20 mM tris (pH 8.0), 150 mM NaCl, and 0.1% Tween 20] before incubation with IRDye 680RD goat anti-rabbit IgG (LI-COR, 926-68071; RRID: AB_10956166) and IRDye 800CW goat anti-mouse IgG (LI-COR, 926-32210; RRID: AB_621842) secondary antibodies in 5% milk in 1× TBS for 1 hour at room temperature. .. Membranes were then washed three times in 1× TBS-T before imaging on Li-COR Odyssey CLx controlled by Imaging Studio software ( www.licorbio.com/image-studio , RRID:SCR_015795). .. Image processing and quantification were performed in ImageJ version 2.14.0 (National Institutes of Health; https://imagej.net/ , RRID:SCR_003070).

    Article Title: Structural basis for Parkinson’s disease-linked LRRK2’s binding to microtubules
    Article Snippet: .. For quantification, blots were imaged on an Odyssey CLx controlled by Imaging Studio software (version 5.2, https://www.licor.com/bio/image-studio/ , RRID: SCR_015795 ), and intensity of bands quantified using Image Studio Lite software (version 5.2, RRID: SCR_013715 ). ..

    Article Title: Cognitive impairments in a Down syndrome model with abnormal hippocampal and prefrontal dynamics and cytoarchitecture
    Article Snippet: After blocking, membranes were washed 3 times (10 min each) in PBST (0.05% Tween in PBS) and incubated for 1 h with the pertinent IRDye-secondary antibody (LI-COR Biosciences) diluted in blocking buffer. .. Finally, membranes were washed twice with PBST and once with PBS for 10 min. Antibody binding was visualised by Odyssey® CLx Imaging System (LI-COR Biosciences) and Image Studio LiteTM Software (LI-COR Biosciences, version 5.2.5) was used for protein quantification. ..

    Article Title: Novel read through agent: ZKN-0013 demonstrates efficacy in APC min model of familial adenomatous polyposis.
    Article Snippet: Familial adenomatous polyposis (FAP) is a precancerous, colorectal disease characterized by hundreds to thousands of adenomatous polyps caused by mutations in the tumor suppressor gene adenomatous polyposis coli (APC).. Approximately 30% of these mutations are premature termination codons (PTC), resulting in the production of a truncated, dysfunctional APC protein.. Consequently, the β-catenin degradation complex fails to form in the cytoplasm, leading to elevated nuclear levels of β-catenin and unregulated β-catenin/wnt-pathway signaling.

    Article Title: Regulatory T cells use heparanase to access IL-2 bound to extracellular matrix in inflamed tissue.
    Article Snippet: Proteins were transferred to nitrocellulose membranes and immunoblotted with primary antibodies against murine HPSE (rabbit polyclonal antibody PAA711Mu04, Cloud-Clone Corp.), human HPSE (mouse monoclonal antibody cloneHP3/17, ProSpec), human/murineβ-actin (mouse monoclonal antibody CAB340Hu22, Cloud-Clone) and murine GAPDH (mouse monoclonal antibody 6C5, EMD Millipore) and subsequently DyLight-680 or DyLight800-conjugated secondary antibodies (Supplementary Table 2). .. Antibody binding was visualized and quantified using andOdyssey Imaging systemand ImageStudio software (Li-Cor). ..

    Article Title: Structural basis for Parkinson's disease-linked LRRK2's binding to microtubules.
    Article Snippet: .. For quantification, blots were imaged on an Odyssey CLx controlled by Imaging Studio software (version 5.2, https://www.licor.com/bio/image-studio/, RRID: SCR_015795), and intensity of bands quantified using Image Studio Lite software (version 5.2, RRID: SCR_013715). ..

    Binding Assay:

    Article Title: Cognitive impairments in a Down syndrome model with abnormal hippocampal and prefrontal dynamics and cytoarchitecture
    Article Snippet: After blocking, membranes were washed 3 times (10 min each) in PBST (0.05% Tween in PBS) and incubated for 1 h with the pertinent IRDye-secondary antibody (LI-COR Biosciences) diluted in blocking buffer. .. Finally, membranes were washed twice with PBST and once with PBS for 10 min. Antibody binding was visualised by Odyssey® CLx Imaging System (LI-COR Biosciences) and Image Studio LiteTM Software (LI-COR Biosciences, version 5.2.5) was used for protein quantification. ..

    Article Title: Regulatory T cells use heparanase to access IL-2 bound to extracellular matrix in inflamed tissue.
    Article Snippet: Proteins were transferred to nitrocellulose membranes and immunoblotted with primary antibodies against murine HPSE (rabbit polyclonal antibody PAA711Mu04, Cloud-Clone Corp.), human HPSE (mouse monoclonal antibody cloneHP3/17, ProSpec), human/murineβ-actin (mouse monoclonal antibody CAB340Hu22, Cloud-Clone) and murine GAPDH (mouse monoclonal antibody 6C5, EMD Millipore) and subsequently DyLight-680 or DyLight800-conjugated secondary antibodies (Supplementary Table 2). .. Antibody binding was visualized and quantified using andOdyssey Imaging systemand ImageStudio software (Li-Cor). ..

    other:

    Article Title: Neurexin-2: An inhibitory neurexin that restricts excitatory synapse formation in the hippocampus
    Article Snippet: Antibodies used were as follows: anti–pan-Nrxn (1:500; rabbit, G392, homemade), anti–pan-Nrxn (1:500; rabbit, G393, homemade), anti–pan-Nrxn (1:500; rabbit, G394, homemade), anti–pan-Nrxn (1:500; rabbit, Nrxn-Rb-Af870, Frontier Institute), anti-Nrxn1 (1:500; rabbit, 175103, Synaptic Systems), anti–pan-Nrxn (1:500; rabbit, A473, homemade), anti–pan-Nrxn (1:500; rabbit, D580, homemade); anti–neuroligin-1 (1:1000; mouse, 129111, Synaptic Systems), anti–neuroligin-2 (1:1500; mouse, 129511, Synaptic Systems), anti–neuroligin-3 (1:1000; rabbit, 129103, Synaptic Systems), anti-CASK (1:1000; mouse, 75-000, Neuromab), anti-Syt1 (synaptotagmin-1) (1:500; rabbit, W855, homemade), anti-Syt2 (1:1000; rabbit, A320, homemade), anti-synapsin (1:1000; rabbit, E028, homemade), anti-SNAP25 (synaptosomal-associated protein, 25kDa) (1:500; rabbit, 439B, homemade), anti-gephyrin (1:1000; mouse, 147111, Synaptic Systems), anti-Gad65 [1:500; mouse, mGad6-a, DHSB (Developmental Studies Hybridoma Bank)], anti–PSD-95 (1:1000; mouse, 75-028, Neuromab), anti–pan-SHANK (SH3 and multiple ankyrin repeat domains) (1:500; mouse, 75-089, Neuromab), anti-GluN1 (1:500; mouse, 54.1), anti-GluN2A (1:500; mouse, 75-288, Neuromab), anti-GluR1 (1:1000; rabbit, Ab1504, Millipore), anti-GluR2 (1:1000; mouse, 182103, Synaptic Systems), anti-vGluT1 (1:1000; rabbit, 135303, Synaptic Systems), anti–PICK-1 (protein interacting with C Kinase-1) (1:500; rabbit, U5831, homemade), anti-calbindin (1:1000; mouse, C9848, Sigma-Aldrich), and anti–β-actin (1:1000; mouse, A1978, Sigma-Aldrich).



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    Image Search Results


    Effect of stefin B and cystatin C deficiency on proliferation and cell death. ( A ) Cell proliferation in primary tumors was determined through immunodetection of Ki67 in PyMT;WT and PyMT;DKO mice at 14 weeks of age. Representative images and quantification of Ki67-positive cells as a percentage of total cells in PyMT;WT (n = 11) and PyMT;DKO (n = 10) tumors. Ki67 index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test. ( B ) Cell death in primary tumors from PyMT;WT and PyMT;DKO mice at 14 weeks of age was determined through TUNEL assays. Representative images and quantification of TUNEL-positive cells as a percentage of total cells in PyMT;WT (n = 9) and PyMT;DKO (n = 8) tumors. The TUNEL+ index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test.

    Journal: Cells

    Article Title: Stefin B and Cystatin C Deficiency Suppresses Tumor Growth and Alters Tumor Microenvironment in a Breast Cancer Model

    doi: 10.3390/cells15040360

    Figure Lengend Snippet: Effect of stefin B and cystatin C deficiency on proliferation and cell death. ( A ) Cell proliferation in primary tumors was determined through immunodetection of Ki67 in PyMT;WT and PyMT;DKO mice at 14 weeks of age. Representative images and quantification of Ki67-positive cells as a percentage of total cells in PyMT;WT (n = 11) and PyMT;DKO (n = 10) tumors. Ki67 index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test. ( B ) Cell death in primary tumors from PyMT;WT and PyMT;DKO mice at 14 weeks of age was determined through TUNEL assays. Representative images and quantification of TUNEL-positive cells as a percentage of total cells in PyMT;WT (n = 9) and PyMT;DKO (n = 8) tumors. The TUNEL+ index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test.

    Article Snippet: The average size of metastases was quantified using computer-assisted analysis with CellSens Imaging software (Version 1.17; Olympus, Tokyo, Japan).

    Techniques: Immunodetection, TUNEL Assay