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10X Genomics grch38 reference genome
Grch38 Reference Genome, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/grch38/pm42279338-58-2-5
Average 86 stars, based on 1 article reviews
grch38 reference genome - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

other:

Article Title: Natural killer cell-mediated immunosurveillance modulates liver cancer evolution through cancer stemness enhancement and lipid metabolism reprogramming.
Article Snippet: Libraries were sequenced on an Illumina NovaSeq 6000 sequencing system (paired-end multiplexing run,150bp) by LC-Bio Technology co.ltd. (HangZhou,China) at a minimum depth of 20,000 reads per cell.

Single Cell RNA-Seq:

Article Title: CellBouncer, a unified toolkit for single-cell demultiplexing and ambient RNA analysis, reveals hominid mitochondrial incompatibilities.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Corning DMSO ThermoFisher Cat# 25-950-CQC Critical commercial assays Chromium Next GEM Single Cell 3ʹ Kit v3.1 10× Genomics Cat#1000268 Deposited data Composite iPSC single-cell RNA-seq reads This study BioProject: PRJNA1358605 Whole genome sequencing data from cell lines This study BioProject: PRJNA1358606 Single-cell gene-expression matrices from composite iPSCs This study GEO: GSE329917 Human/chimpanzee/bonobo ancestor genome and annotation This study, with data from Mao73 https://doi.org/10.6084/m9.figshare. .. 30571958.v1 Rattus norvegicus scRNA-seq reads Kamath et al.38 BioSample: SAMN19715216 Tupaia belangeri scRNA-seq reads Kamath et al.38 BioSample: SAMN19715217 Macaca mulatta scRNA-seq reads Kamath et al.38 BioSample: SAMN19715221 Rattus norvegicus reference transcriptome Ensembl74 release 112 mRatBN7.2 Tupaia belangeri reference transcriptome Ensembl74 release 112 tupBel1 Macaca mulatta reference transcriptome Ensembl74 release 112 Mmul_10 5K 1:1 Mixture of Human HEK293T and Mouse NIH3T3Cells 10× Genomics39 https://www.10xgenomics.com/datasets/ 5k-hgmm-3p-nextgem Homo sapiens reference genome assembly Genome Reference Consortium hg38 (GRCh38) Mus musculus reference genome assembly Genome Reference Consortium mm10 (GRCm38) Homo sapiens genome annotation GENCODE75 Human release 36 (comprehensive, regions: CHR) Mus musculus genome annotation GENCODE75 Mouse release 27 (comprehensive, regions: CHR) sgRNA capture data from human/ cynomolgus macaque pool Edenhofer et al.40 GEO: GSM7720754 scRNA-seq data from human/cynomolgus macaque pool Edenhofer et al.40 SRA: SRR25715412 Homo sapiens reference transcriptome Ensembl74 release 113 GRCh38 Macaca fascicularis reference transcriptome Ensembl74 release 113 Macaca_fascicularis_6.0 40k Mixture of NSCLC DTCs from 7 donors 10× Genomics42 https://www.10xgenomics.com/datasets/ 40-k-mixture-of-nsclc-dt-cs-from-7donors-3-ht-v-3-1-3-1-high-6-1-0 Single cell RNA-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9067 Single cell ATAC-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9068 Homo sapiens CellRanger reference version 2024-A 10× Genomics https://www.10xgenomics.com/support/ software/cell-ranger/downloads lncAtlas Mas-Ponte et al.49 https://lncatlas.crg.eu/ List of genes enriched in ambient RNA Caglayan et al.33 https://doi.org/10.1016/j.neuron.2022.09. ..

Single Cell:

Article Title: CellBouncer, a unified toolkit for single-cell demultiplexing and ambient RNA analysis, reveals hominid mitochondrial incompatibilities.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Corning DMSO ThermoFisher Cat# 25-950-CQC Critical commercial assays Chromium Next GEM Single Cell 3ʹ Kit v3.1 10× Genomics Cat#1000268 Deposited data Composite iPSC single-cell RNA-seq reads This study BioProject: PRJNA1358605 Whole genome sequencing data from cell lines This study BioProject: PRJNA1358606 Single-cell gene-expression matrices from composite iPSCs This study GEO: GSE329917 Human/chimpanzee/bonobo ancestor genome and annotation This study, with data from Mao73 https://doi.org/10.6084/m9.figshare. .. 30571958.v1 Rattus norvegicus scRNA-seq reads Kamath et al.38 BioSample: SAMN19715216 Tupaia belangeri scRNA-seq reads Kamath et al.38 BioSample: SAMN19715217 Macaca mulatta scRNA-seq reads Kamath et al.38 BioSample: SAMN19715221 Rattus norvegicus reference transcriptome Ensembl74 release 112 mRatBN7.2 Tupaia belangeri reference transcriptome Ensembl74 release 112 tupBel1 Macaca mulatta reference transcriptome Ensembl74 release 112 Mmul_10 5K 1:1 Mixture of Human HEK293T and Mouse NIH3T3Cells 10× Genomics39 https://www.10xgenomics.com/datasets/ 5k-hgmm-3p-nextgem Homo sapiens reference genome assembly Genome Reference Consortium hg38 (GRCh38) Mus musculus reference genome assembly Genome Reference Consortium mm10 (GRCm38) Homo sapiens genome annotation GENCODE75 Human release 36 (comprehensive, regions: CHR) Mus musculus genome annotation GENCODE75 Mouse release 27 (comprehensive, regions: CHR) sgRNA capture data from human/ cynomolgus macaque pool Edenhofer et al.40 GEO: GSM7720754 scRNA-seq data from human/cynomolgus macaque pool Edenhofer et al.40 SRA: SRR25715412 Homo sapiens reference transcriptome Ensembl74 release 113 GRCh38 Macaca fascicularis reference transcriptome Ensembl74 release 113 Macaca_fascicularis_6.0 40k Mixture of NSCLC DTCs from 7 donors 10× Genomics42 https://www.10xgenomics.com/datasets/ 40-k-mixture-of-nsclc-dt-cs-from-7donors-3-ht-v-3-1-3-1-high-6-1-0 Single cell RNA-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9067 Single cell ATAC-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9068 Homo sapiens CellRanger reference version 2024-A 10× Genomics https://www.10xgenomics.com/support/ software/cell-ranger/downloads lncAtlas Mas-Ponte et al.49 https://lncatlas.crg.eu/ List of genes enriched in ambient RNA Caglayan et al.33 https://doi.org/10.1016/j.neuron.2022.09. ..

Software:

Article Title: CellBouncer, a unified toolkit for single-cell demultiplexing and ambient RNA analysis, reveals hominid mitochondrial incompatibilities.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Corning DMSO ThermoFisher Cat# 25-950-CQC Critical commercial assays Chromium Next GEM Single Cell 3ʹ Kit v3.1 10× Genomics Cat#1000268 Deposited data Composite iPSC single-cell RNA-seq reads This study BioProject: PRJNA1358605 Whole genome sequencing data from cell lines This study BioProject: PRJNA1358606 Single-cell gene-expression matrices from composite iPSCs This study GEO: GSE329917 Human/chimpanzee/bonobo ancestor genome and annotation This study, with data from Mao73 https://doi.org/10.6084/m9.figshare. .. 30571958.v1 Rattus norvegicus scRNA-seq reads Kamath et al.38 BioSample: SAMN19715216 Tupaia belangeri scRNA-seq reads Kamath et al.38 BioSample: SAMN19715217 Macaca mulatta scRNA-seq reads Kamath et al.38 BioSample: SAMN19715221 Rattus norvegicus reference transcriptome Ensembl74 release 112 mRatBN7.2 Tupaia belangeri reference transcriptome Ensembl74 release 112 tupBel1 Macaca mulatta reference transcriptome Ensembl74 release 112 Mmul_10 5K 1:1 Mixture of Human HEK293T and Mouse NIH3T3Cells 10× Genomics39 https://www.10xgenomics.com/datasets/ 5k-hgmm-3p-nextgem Homo sapiens reference genome assembly Genome Reference Consortium hg38 (GRCh38) Mus musculus reference genome assembly Genome Reference Consortium mm10 (GRCm38) Homo sapiens genome annotation GENCODE75 Human release 36 (comprehensive, regions: CHR) Mus musculus genome annotation GENCODE75 Mouse release 27 (comprehensive, regions: CHR) sgRNA capture data from human/ cynomolgus macaque pool Edenhofer et al.40 GEO: GSM7720754 scRNA-seq data from human/cynomolgus macaque pool Edenhofer et al.40 SRA: SRR25715412 Homo sapiens reference transcriptome Ensembl74 release 113 GRCh38 Macaca fascicularis reference transcriptome Ensembl74 release 113 Macaca_fascicularis_6.0 40k Mixture of NSCLC DTCs from 7 donors 10× Genomics42 https://www.10xgenomics.com/datasets/ 40-k-mixture-of-nsclc-dt-cs-from-7donors-3-ht-v-3-1-3-1-high-6-1-0 Single cell RNA-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9067 Single cell ATAC-seq of human fetal liver and bone marrow cells Ranzoni et al.43 ArrayExpress: E-MTAB-9068 Homo sapiens CellRanger reference version 2024-A 10× Genomics https://www.10xgenomics.com/support/ software/cell-ranger/downloads lncAtlas Mas-Ponte et al.49 https://lncatlas.crg.eu/ List of genes enriched in ambient RNA Caglayan et al.33 https://doi.org/10.1016/j.neuron.2022.09. ..



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