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genomic suite microarray data analysis software  (Partek)

 
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    Structured Review

    Partek genomic suite microarray data analysis software
    Genomic Suite Microarray Data Analysis Software, supplied by Partek, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genomics+suite+(software+analysis+microarray+data/genomics+suite+software/pmc03900551-42-17-24
    Average 90 stars, based on 1 article reviews
    genomic suite microarray data analysis software - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    other:

    Article Title: Knockdown of USF1 and USF2 drives prolonged changes in the gene expression response of M12-5B3 cells to DNA damage.
    Article Snippet: Microarray analysis was performed using a three-way (cell line, treatment, and time) analysis of variance (ANOVA) model with a three-way interaction term in Partek Genomics Suite v6.6 software.

    Article Title: The role of estrogen receptor β in maintaining basal cells and modulating the immune environment in the prostate.
    Article Snippet: Partek Genomics Suite v6.6 was used to assign reads to genes by using RefSeq transcript annotations, generating reads per kilobase of exon model per million mapped reads.

    Article Title: Abolishing ANAC017 ‐Mediated Mitochondria Retrograde Signalling Alleviates Ammonium Toxicity in Arabidopsis thaliana
    Article Snippet: Hierarchical clustering was performed using Partek Genomics Suite v. 6.6 (Partek Inc.).

    Article Title: Hyperacute response proteins synthesized on γ-tubulin-FTO-MARK4 translation microdomains regulate cancer's acute stress response.
    Article Snippet: Partek Genomics Suite 7.19.1125 was used for upstream regulators analysis and disease and function analysis.

    Biomarker Discovery:

    Article Title: Nasal genes used to identify, characterize, and diagnose viral respiratory infections
    Article Snippet: .. Identification of Classifiers Using Leave-One-Out Cross Validation Plus Shrinking Centroid Algorithm and k-Nearest Neighbor Algorithms Using the model selection tool in the Partek Genomics Suite software (v7.0, Partek Inc., St Louis, MO), we applied the 2-level nested 10-fold leave-one-out cross validation method to select the best model for classification of viral infection from healthy control subjects. ..

    Selection:

    Article Title: Nasal genes used to identify, characterize, and diagnose viral respiratory infections
    Article Snippet: .. Identification of Classifiers Using Leave-One-Out Cross Validation Plus Shrinking Centroid Algorithm and k-Nearest Neighbor Algorithms Using the model selection tool in the Partek Genomics Suite software (v7.0, Partek Inc., St Louis, MO), we applied the 2-level nested 10-fold leave-one-out cross validation method to select the best model for classification of viral infection from healthy control subjects. ..

    Software:

    Article Title: Nasal genes used to identify, characterize, and diagnose viral respiratory infections
    Article Snippet: .. Identification of Classifiers Using Leave-One-Out Cross Validation Plus Shrinking Centroid Algorithm and k-Nearest Neighbor Algorithms Using the model selection tool in the Partek Genomics Suite software (v7.0, Partek Inc., St Louis, MO), we applied the 2-level nested 10-fold leave-one-out cross validation method to select the best model for classification of viral infection from healthy control subjects. ..

    Article Title: Dengue infection elicits skin tissue-resident and circulating CD8 + T-cells associated with protection from hospitalization
    Article Snippet: .. Statistical analyses for the Olink data was performed by One-way ANOVA using Partek Genomic Suite Analysis Version 7 software. ..

    Article Title: Mineralocorticoid receptor knockout alters hippocampal CA2 neurons to become like those in CA1.
    Article Snippet: .. Principal component analysis (PCA) and hierarchical clustering of these spots were generated by the Genomics Suite of Partek software package version 6.6. ..

    Article Title: Analyzing RNA for diagnosing infection type
    Article Snippet: Arrays were scanned using the Affymetrix GeneChip Scanner 3000 7G. .. Partek Genomic Suite software was then used to extract raw data, perform mean probe summarization, RMA and quintile normalization and GC content correction (Downey 2006). ..

    Infection:

    Article Title: Nasal genes used to identify, characterize, and diagnose viral respiratory infections
    Article Snippet: .. Identification of Classifiers Using Leave-One-Out Cross Validation Plus Shrinking Centroid Algorithm and k-Nearest Neighbor Algorithms Using the model selection tool in the Partek Genomics Suite software (v7.0, Partek Inc., St Louis, MO), we applied the 2-level nested 10-fold leave-one-out cross validation method to select the best model for classification of viral infection from healthy control subjects. ..

    Control:

    Article Title: Nasal genes used to identify, characterize, and diagnose viral respiratory infections
    Article Snippet: .. Identification of Classifiers Using Leave-One-Out Cross Validation Plus Shrinking Centroid Algorithm and k-Nearest Neighbor Algorithms Using the model selection tool in the Partek Genomics Suite software (v7.0, Partek Inc., St Louis, MO), we applied the 2-level nested 10-fold leave-one-out cross validation method to select the best model for classification of viral infection from healthy control subjects. ..

    Generated:

    Article Title: Mineralocorticoid receptor knockout alters hippocampal CA2 neurons to become like those in CA1.
    Article Snippet: .. Principal component analysis (PCA) and hierarchical clustering of these spots were generated by the Genomics Suite of Partek software package version 6.6. ..



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