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imgt/hla sequence database  (Conexio Genomics Pty Ltd)

 
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    Conexio Genomics Pty Ltd imgt/hla sequence database
    Imgt/Hla Sequence Database, supplied by Conexio Genomics Pty Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genomic+sequence+databases/imgt+hla+sequence+database/pmc04205124-274-27-68
    Average 90 stars, based on 1 article reviews
    imgt/hla sequence database - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Software:

    Article Title: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation Sequencing
    Article Snippet: The Conexio ATF software lists the most abundant sequences generated by the 454 pyrosequencing reaction and assigns HLA genotypes by comparing the consensus sequence reads to the IMGT/HLA sequence database ( 16 ). shows a screen interface for this software for the HLA-B locus of sample 11 (this is the first sample of region 2 on the PTP and shows as Sample 1 in this version of the Conexio software).

    Generated:

    Article Title: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation Sequencing
    Article Snippet: The Conexio ATF software lists the most abundant sequences generated by the 454 pyrosequencing reaction and assigns HLA genotypes by comparing the consensus sequence reads to the IMGT/HLA sequence database ( 16 ). shows a screen interface for this software for the HLA-B locus of sample 11 (this is the first sample of region 2 on the PTP and shows as Sample 1 in this version of the Conexio software).

    Sequencing:

    Article Title: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation Sequencing
    Article Snippet: The Conexio ATF software lists the most abundant sequences generated by the 454 pyrosequencing reaction and assigns HLA genotypes by comparing the consensus sequence reads to the IMGT/HLA sequence database ( 16 ). shows a screen interface for this software for the HLA-B locus of sample 11 (this is the first sample of region 2 on the PTP and shows as Sample 1 in this version of the Conexio software).



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    Maximum likelihood tree of Yersinia based on an alignment of concatenated allele sequences from 500 core genes. Bootstrap values for species-level clades are shown. The scale bar shows nucleotide substitutions per site.

    Journal: International Journal of Systematic and Evolutionary Microbiology

    Article Title: Yersinia fenwicki sp. nov., isolated from human clinical cases in Aotearoa | New Zealand and Australia

    doi: 10.1099/ijsem.0.007034

    Figure Lengend Snippet: Maximum likelihood tree of Yersinia based on an alignment of concatenated allele sequences from 500 core genes. Bootstrap values for species-level clades are shown. The scale bar shows nucleotide substitutions per site.

    Article Snippet: Assemblies for the published isolates were downloaded from either the Bacterial Isolate Genome Sequence Database (BIGSdb) Yersinia database hosted by the Pasteur Institute [ ] or EnteroBase [ ].

    Techniques: