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Biotechnology Information genome sequence archive (gsa) database
Genome Sequence Archive (Gsa) Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/genomic+sequence+databases/genome+sequence+archive/pm40155797-84-6-16
Average 90 stars, based on 1 article reviews
genome sequence archive (gsa) database - by Bioz Stars, 2026-11
90/100 stars

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Article Title: Deciphering the molecular transcriptomic mechanisms of carbon ion beams and X-ray on rice seedlings.
Article Snippet: Transcriptome data were uploaded to the Genome Sequence Archive (GSA) database of the National Center for Biotechnology Information, under accession number CRA014790.

Sequencing:

Article Title: A strategy for controlling Hypervirulent Klebsiella pneumoniae : inhibition of ClpV expression
Article Snippet: .. The raw data of the transcriptome were submitted to the Genome Sequence Archive in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under the accession PRJNA1183402 ( https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA1183402 ). ..

Article Title: Multispecies emergence of dual bla KPC/NDM carbapenemase-producing Enterobacterales recovered from invasive infections in Chile.
Article Snippet: Carbapenemase-producing carbapenem-resistant Enterobacterales (CP-CRE) represent a significant global threat.. The emergence of dual CP-CRE is particularly alarming, as they can potentially compromise the efficacy of newer antibiotics, further decreasing therapeutic alternatives.. Herein, we report the emergence of multiple species of CP-CRE recovered from invasive infections in Chile that simulta neously harbor blaKPC and blaNDM and provide an in-depth genomic characterization of these worrisome pathogens.

Article Title: Transcriptome and translatome profiling of Col-0 and grp7grp8 under ABA treatment in Arabidopsis.
Article Snippet: .. The raw sequence data of RNA-seq, Ribo-seq, and CLIP-seq in this study were deposited in the Genome Sequence Archive (https://bigd.big.ac.cn/gsa)39 in National Genomics Data Center40 under accession number CRA01279841 and also been deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive under BioProject accession number PRJNA115722342. ..

Article Title: Personalized inhaled bacteriophage therapy for treatment of multidrug-resistant Pseudomonas aeruginosa in cystic fibrosis.
Article Snippet: Isolate sequencing and comparative genomics Libraries were prepared from sputum-derived PsA isolates using the Nextera XT DNA Library Prep Kit and sequenced on an Illumina NextSeq platform. .. Sequencing data have been made available at the National Center for Biotechnology Information Sequence Archive (accession no. PRJNA1182815). ..

Article Title: Oxygen regulation of microbial communities and chemical compounds in cigar tobacco curing
Article Snippet: .. The original sequence data reported in this article has been deposited in the genome sequence archives of the National Center for Biotechnology Information in the United States under accession numbers PRJNA1055691 and PRJNA1055872, and is publicly accessible at: https://www.ncbi.nlm.nih.gov . ..

Article Title: Multispecies emergence of dual bla KPC/NDM carbapenemase-producing Enterobacterales recovered from invasive infections in Chile
Article Snippet: .. All genomes included in this study are publicly available at the U.S. National Center for Biotechnology Information at the Genome Sequence Archive under the BioProject ID PRJNA1044051 . .. All genomes included in this study are publicly available at the U.S. National Center for Biotechnology Information at the Genome Sequence Archive under the BioProject ID PRJNA1044051 .

Article Title: A strategy for controlling Hypervirulent Klebsiella pneumoniae: inhibition of ClpV expression.
Article Snippet: .. Data availability The raw data of the transcriptome were submitted to the Genome Sequence Archive in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under the accession PRJNA1183402 ( h t t p s : / / w w w . n c b i . n l m . n i h . g o v / s r a / ? t e r m = P R J N A 1 1 8 3 4 0 2 ) . ..

RNA Sequencing:

Article Title: Transcriptome and translatome profiling of Col-0 and grp7grp8 under ABA treatment in Arabidopsis.
Article Snippet: .. The raw sequence data of RNA-seq, Ribo-seq, and CLIP-seq in this study were deposited in the Genome Sequence Archive (https://bigd.big.ac.cn/gsa)39 in National Genomics Data Center40 under accession number CRA01279841 and also been deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive under BioProject accession number PRJNA115722342. ..

Cross-linking Immunoprecipitation:

Article Title: Transcriptome and translatome profiling of Col-0 and grp7grp8 under ABA treatment in Arabidopsis.
Article Snippet: .. The raw sequence data of RNA-seq, Ribo-seq, and CLIP-seq in this study were deposited in the Genome Sequence Archive (https://bigd.big.ac.cn/gsa)39 in National Genomics Data Center40 under accession number CRA01279841 and also been deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive under BioProject accession number PRJNA115722342. ..



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Maximum likelihood tree of Yersinia based on an alignment of concatenated allele sequences from 500 core genes. Bootstrap values for species-level clades are shown. The scale bar shows nucleotide substitutions per site.

Journal: International Journal of Systematic and Evolutionary Microbiology

Article Title: Yersinia fenwicki sp. nov., isolated from human clinical cases in Aotearoa | New Zealand and Australia

doi: 10.1099/ijsem.0.007034

Figure Lengend Snippet: Maximum likelihood tree of Yersinia based on an alignment of concatenated allele sequences from 500 core genes. Bootstrap values for species-level clades are shown. The scale bar shows nucleotide substitutions per site.

Article Snippet: Assemblies for the published isolates were downloaded from either the Bacterial Isolate Genome Sequence Database (BIGSdb) Yersinia database hosted by the Pasteur Institute [ ] or EnteroBase [ ].

Techniques: