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NimbleGen Systems GmbH l. maculans whole-genome expression arrays
Amino acid sequences were retrieved from the Entrez database of NCBI. L. mac , L. <t>maculans</t> CBX96122.1; A. nid , Aspergillus nidulans CBF85797.1; N. cra , Neurospora crassa AAR19291.1; D. mel , Drosophila melanogaster AAA28620.1; H. sap , Homo sapiens NP_001120794.1; A. tha , A. thaliana AED92456.1. The orange bar indicates the conserved chromo domain involved in the recognition of H3K9me3 and also H3K27me3 in A. thaliana ; the red bar indicates the conserved chromo-shadow domain involved in protein-protein interactions . The asterisks indicate the three aromatic residues forming the binding pocket for H3K9me3 .
L. Maculans Whole Genome Expression Arrays, supplied by NimbleGen Systems GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/genomic+expression+array+profiling/pmc03945186-296-0-9?v=NimbleGen+Systems+GmbH
Average 90 stars, based on 1 article reviews
l. maculans whole-genome expression arrays - by Bioz Stars, 2026-08
90/100 stars

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1) Product Images from "Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans"

Article Title: Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans

Journal: PLoS Genetics

doi: 10.1371/journal.pgen.1004227

Amino acid sequences were retrieved from the Entrez database of NCBI. L. mac , L. maculans CBX96122.1; A. nid , Aspergillus nidulans CBF85797.1; N. cra , Neurospora crassa AAR19291.1; D. mel , Drosophila melanogaster AAA28620.1; H. sap , Homo sapiens NP_001120794.1; A. tha , A. thaliana AED92456.1. The orange bar indicates the conserved chromo domain involved in the recognition of H3K9me3 and also H3K27me3 in A. thaliana ; the red bar indicates the conserved chromo-shadow domain involved in protein-protein interactions . The asterisks indicate the three aromatic residues forming the binding pocket for H3K9me3 .
Figure Legend Snippet: Amino acid sequences were retrieved from the Entrez database of NCBI. L. mac , L. maculans CBX96122.1; A. nid , Aspergillus nidulans CBF85797.1; N. cra , Neurospora crassa AAR19291.1; D. mel , Drosophila melanogaster AAA28620.1; H. sap , Homo sapiens NP_001120794.1; A. tha , A. thaliana AED92456.1. The orange bar indicates the conserved chromo domain involved in the recognition of H3K9me3 and also H3K27me3 in A. thaliana ; the red bar indicates the conserved chromo-shadow domain involved in protein-protein interactions . The asterisks indicate the three aromatic residues forming the binding pocket for H3K9me3 .

Techniques Used: Protein-Protein interactions, Binding Assay

Amino acid sequences were retrieved from the Entrez database of NCBI. Alignment of DIM-5 proteins; L. mac , L. maculans CBX92341.1; A. nid , Aspergillus nidulans CBF88005.1; N. cra , Neurospora crassa AAL35215.1; D. mel , Drosophila melanogaster AAF55154.1; H. sap , Homo sapiens CAG46546.1; A. tha , A. thaliana AAK28967.1. The grey bar indicates the conserved pre-SET domain that includes a Zn 3 Cys 9 motif; the blue bar indicates the conserved SET-domain involved in AdoMet binding site and active site. The nine cysteines residues forming the conserved zinc cluster are indicated with black dots; the three residues with catalytic roles are indicated with asterisks .
Figure Legend Snippet: Amino acid sequences were retrieved from the Entrez database of NCBI. Alignment of DIM-5 proteins; L. mac , L. maculans CBX92341.1; A. nid , Aspergillus nidulans CBF88005.1; N. cra , Neurospora crassa AAL35215.1; D. mel , Drosophila melanogaster AAF55154.1; H. sap , Homo sapiens CAG46546.1; A. tha , A. thaliana AAK28967.1. The grey bar indicates the conserved pre-SET domain that includes a Zn 3 Cys 9 motif; the blue bar indicates the conserved SET-domain involved in AdoMet binding site and active site. The nine cysteines residues forming the conserved zinc cluster are indicated with black dots; the three residues with catalytic roles are indicated with asterisks .

Techniques Used: Binding Assay

Number of L.  maculans  genes up-regulated or down-regulated in a silenced- LmHP1 or silenced- LmDIM5 background according to their genomic location.
Figure Legend Snippet: Number of L. maculans genes up-regulated or down-regulated in a silenced- LmHP1 or silenced- LmDIM5 background according to their genomic location.

Techniques Used:

List of L.  maculans  genes located in AT-isochores and significantly up-regulated both in the silenced- LmHP1 and silenced- LmDIM5 transformants according to their transcriptional profiles during in planta infection.
Figure Legend Snippet: List of L. maculans genes located in AT-isochores and significantly up-regulated both in the silenced- LmHP1 and silenced- LmDIM5 transformants according to their transcriptional profiles during in planta infection.

Techniques Used: Infection



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