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genomic sequences data  (Biotechnology Information)

 
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    Biotechnology Information genomic sequences data
    Genomic Sequences Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genome+sequence+data/data+rna+seq+%E2%80%A2/pmc13196752-355-1-15
    Average 86 stars, based on 1 article reviews
    genomic sequences data - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    RNA sequencing:

    Article Title: Gamabufotalin suppresses pancreatic cancer through redox-homeostasis disruption by G6PD downregulation.
    Article Snippet: .. Availability of data and materials The RNA-sequencing raw data are deposited in the National Center for Biotechnology Information (NCBI) under accession number PRJNA1465187. ..

    RNA Sequencing:

    Article Title: mmu_circ_0012122/mmu-miR-1843-5p/Sertad2 axis: A novel regulatory pathway in rabies virus infection.
    Article Snippet: .. The raw RNA sequencing data that support the findings of this study are openly available in National Center for Biotechnology Information (NCBI), at https://www.ncbi.nlm.nih.gov/sra/? term=PRJNA105390742, and the raw experimental data are openly available in Figshare database at https://doi.org/10. ..

    Article Title: PKCα-mediated nuclear translocation of cGAS stabilizes β-catenin and drives metastasis.
    Article Snippet: Article PKCα-mediated nuclear translocation of cGAS stabilizes β-catenin and drives metastasis

    Article Title: Epithelial cell expansion drives cyst progression in genetic models of autosomal recessive polycystic kidney disease
    Article Snippet: .. • RNA-seq data have been deposited at the National Center for Biotechnology Information Sequence Read Archive (SRA): PRJNA1065508 and are publicly available as of the date of publication. .. • RNA-seq data have been deposited at the National Center for Biotechnology Information Sequence Read Archive (SRA): PRJNA1065508 and are publicly available as of the date of publication.

    Article Title: Mitochondrial protein OPA3 sustains cardiac function by regulating calcium handling in male mice.
    Article Snippet: .. The RNA-seq data generated in this study have been deposited in National Center for Biotechnology Information (NCBI) under the project ID PRJNA1460849 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1460849). .. Publicly available singlenucleus transcriptomic data of human cardiomyopathy are available through the Broad Institute’s Single Cell Portal (https://singlecell.broadinstitute.org/single_cell) under project ID SCP1303, SCP1849, and SCP1852.

    Generated:

    Article Title: PKCα-mediated nuclear translocation of cGAS stabilizes β-catenin and drives metastasis.
    Article Snippet: Article PKCα-mediated nuclear translocation of cGAS stabilizes β-catenin and drives metastasis

    Article Title: Mitochondrial protein OPA3 sustains cardiac function by regulating calcium handling in male mice.
    Article Snippet: .. The RNA-seq data generated in this study have been deposited in National Center for Biotechnology Information (NCBI) under the project ID PRJNA1460849 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1460849). .. Publicly available singlenucleus transcriptomic data of human cardiomyopathy are available through the Broad Institute’s Single Cell Portal (https://singlecell.broadinstitute.org/single_cell) under project ID SCP1303, SCP1849, and SCP1852.

    Sequencing:

    Article Title: Epithelial cell expansion drives cyst progression in genetic models of autosomal recessive polycystic kidney disease
    Article Snippet: .. • RNA-seq data have been deposited at the National Center for Biotechnology Information Sequence Read Archive (SRA): PRJNA1065508 and are publicly available as of the date of publication. .. • RNA-seq data have been deposited at the National Center for Biotechnology Information Sequence Read Archive (SRA): PRJNA1065508 and are publicly available as of the date of publication.

    Article Title: Nanopore long-read metabarcoding for comprehensive characterisation of parasitic nematodes in humans and animals: a development and diagnostic validation study.
    Article Snippet: .. All sequencing data produced in the present study are available from the National Center for Biotechnology Information BioProject database under the accession PRJNA1171489. ..

    Produced:

    Article Title: Nanopore long-read metabarcoding for comprehensive characterisation of parasitic nematodes in humans and animals: a development and diagnostic validation study.
    Article Snippet: .. All sequencing data produced in the present study are available from the National Center for Biotechnology Information BioProject database under the accession PRJNA1171489. ..



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    Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; <t>WGII,</t> <t>whole-genome</t> instability index;ll *, P < 0.05.
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    Image Search Results


    Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

    Journal: Molecular Cancer Research

    Article Title: Contrasting Features of Papillary and Chromophobe Renal Cell Carcinoma Revealed by Whole-Genome Sequencing

    doi: 10.1158/1541-7786.MCR-25-0616

    Figure Lengend Snippet: Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

    Article Snippet: We analyzed whole-genome sequencing data on 164 tumor–normal pairs from the Genomics England 100,000 Genomes Project, providing a comprehensive, high-resolution map of copy number alterations, structural variation, and key global genomic features, including mutational signatures, intratumor heterogeneity, and analysis of extrachromosomal DNA formation.

    Techniques: Sampling, Variant Assay

    Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

    Journal: Molecular Cancer Research

    Article Title: Contrasting Features of Papillary and Chromophobe Renal Cell Carcinoma Revealed by Whole-Genome Sequencing

    doi: 10.1158/1541-7786.MCR-25-0616

    Figure Lengend Snippet: Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

    Article Snippet: To address this shortcoming, we report the analysis of whole-genome sequencing (WGS) data generated on tumor–normal (T/N) pairs from 164 patients recruited from NHS Genomic Medicine Centres (GMC) across England, as part of the Genomics England 100,000 Genomes Project (100kGP, RRID: SCR_010502; refs , ).

    Techniques: Sampling, Variant Assay